| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 463,863 | T→C | intergenic (‑47041/‑33600) | unknown ← / → unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 463,863 | 0 | T | C | 100.0% | 224.3 / NA | 81 | intergenic (‑47041/‑33600) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (45/36); total (45/36) | |||||||||||
CCGCTAAATTAGACGATGATTTATATGAAGTCTGCTTAAATATTTCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCTCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCATTTTTTTGCCATAAGGAGTAAATGATGAATACGACCATAGCCGATTTCCCTATCACCGTGCTGGGTGCCGGTTCTTTTG > 1/463630‑464108 | ccGCTAAATTAGACGATGATTTATATGAAGTCTGCTTAAATATTTCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCttt > 1:794529/1‑249 (MQ=255) cGCTAAATTAGACGATGATTTATATGAAGTCTGCTTAAATATTTCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTtctc < 1:695421/251‑1 (MQ=255) aTTAGACGATGATTTATATGAAGTCTGCTTAAATATTTCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTaa > 1:583746/1‑251 (MQ=255) aGACGATGATTTATATGAAGTCTGCTTAAATATTTCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAAt > 1:486916/1‑250 (MQ=255) gatTTATATGAAGTCTGCTTAAATATTTCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGc > 1:250987/1‑221 (MQ=255) gatTTATATGAAGTCTGCTTAAATATTTCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGAcg > 1:178932/1‑250 (MQ=255) gatTTATATGAAGTCTGCTTAAATATTTCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGAcg > 1:291719/1‑250 (MQ=255) atTTATATGAAGTCTGCTTAAATATTTCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCt < 1:691807/229‑1 (MQ=255) atatGAAGTCTGCTTAAATATTTCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGCAGAAATGCAAATGGCGCATTGCTTCACTTCACAATGCCCGAATATGTTATTCCCGCATGCGCGCGAATTGGCTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTCCTCCGGTAACTTTTGAcgccccat > 1:664148/1‑246 (MQ=255) atGAAGTCTGCTTAAATATTTCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTAttt < 1:459930/251‑1 (MQ=255) gCTTAAATATTTCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATttgttg < 1:842001/246‑1 (MQ=255) gCTTAAATATTTCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAatat > 1:634584/1‑251 (MQ=255) gCTTAAATATTTCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAatat > 1:260652/1‑251 (MQ=255) gCTTAAATATTTCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAatat > 1:279352/1‑251 (MQ=255) gCTTAAATATTTCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTAGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCAt > 1:452745/1‑207 (MQ=255) aaaTATTTCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTAc < 1:487192/251‑1 (MQ=255) aaaTATTTCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTAc < 1:379132/251‑1 (MQ=255) aaTATTTCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATttgttg < 1:346870/241‑1 (MQ=255) aaTATTTCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACa > 1:542884/1‑251 (MQ=255) tatTTCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAAc < 1:681215/251‑1 (MQ=255) tttCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATttgt < 1:587662/235‑1 (MQ=255) gTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAata < 1:12574/236‑1 (MQ=255) gTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGa > 1:297038/1‑251 (MQ=255) tGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGaa < 1:318260/251‑1 (MQ=255) gAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGaac < 1:501300/250‑1 (MQ=255) cTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACaa > 1:446218/1‑236 (MQ=255) aCATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATc > 1:864915/1‑190 (MQ=255) aCATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTAc > 1:282794/1‑232 (MQ=255) aCATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAg > 1:534339/1‑250 (MQ=255) cATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATttgtt < 1:600243/221‑1 (MQ=255) ggAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAag > 1:16817/1‑251 (MQ=255) gATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAgg > 1:268977/1‑250 (MQ=255) gCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACaa < 1:483982/210‑1 (MQ=255) cATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAagag > 1:788919/1‑229 (MQ=255) tCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTTACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACa > 1:304291/1‑251 (MQ=255) gtgtTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCa > 1:394050/1‑249 (MQ=255) tgtTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATttgttg < 1:351235/168‑1 (MQ=255) gtTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATttgtt > 1:636902/1‑166 (MQ=255) gtTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACttt > 1:375327/1‑251 (MQ=255) gtTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACttt > 1:859313/1‑251 (MQ=255) gtTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACttt > 1:743169/1‑251 (MQ=255) aCCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAg > 1:195275/1‑251 (MQ=255) ccATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGt < 1:282501/251‑1 (MQ=255) cAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCaa < 1:317109/205‑1 (MQ=255) ggCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAag < 1:308883/187‑1 (MQ=255) cTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAg < 1:810979/250‑1 (MQ=255) aTGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTAttt < 1:243407/251‑1 (MQ=255) aTGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGGTTCCAACTTAGTAAACCGAGGTACTTCCCCGGCATTAAATCTTTCTCCGGTAAATTTTAACGCGCTATTTGATGAATATTTACAACGTCAGGAACAACAAGAGCAAGAGGCCCGAGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTAAGTCTTGAAAAgagagattattt > 1:382948/1‑240 (MQ=255) gCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCAtttt > 1:62328/1‑251 (MQ=255) gCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCAtttt > 1:183851/1‑251 (MQ=255) gCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCAtttt > 1:609874/1‑251 (MQ=255) gCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTCGAAAAg < 1:296435/224‑1 (MQ=255) tAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAg > 1:384195/1‑183 (MQ=255) aCTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCAtttt > 1:7420/1‑246 (MQ=255) cacaATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCATTTTTTTGCCa > 1:509235/1‑249 (MQ=255) aaTGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCATTTTTTTGCCATAAgg < 1:750053/251‑1 (MQ=255) aTGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTaaa < 1:615891/186‑1 (MQ=255) gCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTAttt < 1:817629/220‑1 (MQ=255) gAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCATTTTTTTGCCATAAGGAGTAAat > 1:824717/1‑251 (MQ=255) aaTATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATttgt < 1:544649/104‑1 (MQ=255) aaTATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGaac > 1:206960/1‑127 (MQ=255) aaTATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGaaa > 1:696590/1‑202 (MQ=255) aaTATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCATTTTTTTGCCATAAGGAGTAAatg > 1:739468/1‑251 (MQ=255) tatGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCA‑TTTTTTGCCATAAGGAGTAAatgatg < 1:546985/251‑1 (MQ=255) atGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGAcg > 1:341139/1‑91 (MQ=255) tGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACaa > 1:8731/1‑113 (MQ=255) ttATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCATTTTTTTGCCATAAGGAg > 1:558812/1‑239 (MQ=255) aTTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAAttt > 1:851841/1‑81 (MQ=255) cccGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCATTTTTTTGCCATAAGGAGTAAATGATGAATACGAc < 1:259075/251‑1 (MQ=255) cccGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCATTTTTTTGCCATAAGGAGTAAATGATGAATACGAc < 1:662263/251‑1 (MQ=255) ccAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAaat < 1:573472/137‑1 (MQ=255) cAACTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCATTTTTTTGCCATAAGGAGTAAATGATGAATACGACCa > 1:325704/1‑229 (MQ=255) aCTTAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCATTTTTTTGCCa < 1:343374/201‑1 (MQ=255) ttAGTAAACCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCATTTTTTTGCCATAAGGAGTAAATGATGAATACGACCATAGCCGATTTCCCTATCACCGTGCTg < 1:18970/251‑1 (MQ=255) aaaCCGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCATTTTTTTGCCATAAGGAGTAAATGATGAATACGACCATAGCCGATTTCCCTATCACCGTGCTGGGTGc < 1:530452/251‑1 (MQ=255) ccGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCATTTTTTTGCCATAAGGAGTAAatg < 1:564848/204‑1 (MQ=255) ccGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCATTTTTTTGCCATAAGGAGTAAATGATGAATACGACCATAGCCGATTTCCCTATCACCGTGCTGGGt < 1:215775/246‑1 (MQ=255) ccGCGGTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCATTTTTTTGCCATAAGGAGTAAATGATGAATACGACCATAGCCGATTTCCCTATCACCGTGCTGGGTGCCgg > 1:174861/1‑251 (MQ=255) gTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCATTTTTTTGCCATAAGGAGTAAATGATGAATACGACCATAGCCGATTTCCCTATCACCGTGCTg > 1:470487/1‑238 (MQ=255) gTACTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCATTTTTTTGCCATAAGGAGTAAATGATGAATACGACCATAGCCGATTTCCCTATCACCGTGCTGGGTGCCGGtt < 1:45213/248‑1 (MQ=255) cTTTCCCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCATTTTTTTGCCATAAGGAGTAAATGATGAATACGACCATAGCCGATTTCCCTATCACCGTGCTGGGTGCCGGTTCTTTTg < 1:68386/251‑1 (MQ=255) | CCGCTAAATTAGACGATGATTTATATGAAGTCTGCTTAAATATTTCAGTGGAAACTACATTGGAAGATTCCGGTGATGTGGCATTCATCTGTGAAGTGAAACAAGCAGGCGTGTTTACCATCAGTGGCTTGGAAGAAATGCAAATGGCGCATTGCTTAACTTCACAATGCCCGAATATGTTATTCCCGTATGCGCGCGAATTGGTTTCCAACTTAGTAAACCGCGGTACTTTCTCGGCATTAAATCTTTCTCCGGTAAATTTTGACGCGCTATTTGTTGAATATTTACAACGTCAGGAACAACAAGCGCAAGAGGCCGGCGAGCAAAGCGAACCAACAGTAAATTAATTAAAAAACCCACTTTTTAGTCTTGAAAAGTGGGTTTATTTTTTTCGGTAGCATTTTTTTGCCATAAGGAGTAAATGATGAATACGACCATAGCCGATTTCCCTATCACCGTGCTGGGTGCCGGTTCTTTTG > 1/463630‑464108 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |