| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 423,316 | T→A | intergenic (‑6494/‑74147) | unknown ← / → unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 423,316 | 0 | T | A | 100.0% | 246.1 / NA | 91 | intergenic (‑6494/‑74147) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (56/35); total (56/35) | |||||||||||
TTGATAATCGCCCAAATCCCCTTTAAATTCCTCCACCTGCTTATCGTGCACCAAATAAAATTCATCTACTGTGTTACGCAATAAATGGCGATCGTGCGACACCAACACCAAAGAGCCCTGATAATCCACCAAGGCTTCCGTTAACGCCTGACGCATATCTAAAATCCAAGTGGTTGGTCGGCTCGTCCAGCAGCAGCAAATTCGGGCGTTGCCACACGATGAGCGCCAGCACCAGACGCGCTTTTTCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACGCCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGAC > 1/423072‑423557 | ctgcttatcgtgcaccaaataaaattcatctactgtgttacgcaataaatggcgatcgtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCg < 1:158092‑M2/11‑1 (MQ=255) tgcttatcgtgcaccaaataaaattcatctactgtgttacgcaataaatggcgatcgtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGt > 1:24183‑M2/240‑251 (MQ=255) atcgtgcaccaaataaaattcatctactgtgttacgcaataaatggcgatcgtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGaaa > 1:763497‑M2/235‑250 (MQ=255) aaataaaattcatctactgtgttacgcaataaatggcgatcgtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCg > 1:462676‑M2/225‑250 (MQ=255) aaataaaattcatctactgtgttacgcaataaatggcgatcgtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCg > 1:171232‑M2/225‑250 (MQ=255) ataaaattcatctactgtgttacgcaataaatggcgatcgtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGcc > 1:166603‑M2/223‑250 (MQ=255) aaattcatctactgtgttacgcaataaatggcgatcgtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCaaa > 1:234660‑M2/220‑251 (MQ=255) ttcatctactgtgttacgcaataaatggcgatcgtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAaataa > 1:253873‑M2/217‑251 (MQ=255) ttcatctactgtgttacgcaataaatggcgatcgtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAaataa < 1:790601‑M2/35‑1 (MQ=255) ttcatctactgtgttacgcaataaatggcgatcgtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAaata < 1:697583‑M2/34‑1 (MQ=255) catctactgtgttacgcaataaatggcgatcgtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGc < 1:651151‑M2/9‑1 (MQ=255) catctactgtgttacgcaataaatggcgatcgtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAaataat > 1:674738‑M2/215‑250 (MQ=255) ctactgtgttacgcaataaatggcgatcgtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATc > 1:405414‑M2/212‑235 (MQ=255) ctactgtgttacgcaataaatggcgatcgtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATcgcg > 1:846026‑M2/212‑251 (MQ=255) gtgttacgcaataaatggcgatcgtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCg < 1:353692‑M2/11‑1 (MQ=255) ttacgcaataaatggcgatcgtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGc < 1:736973‑M2/47‑1 (MQ=255) gcaataaatggcgatcgtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgcttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTc > 1:384704‑M2/199‑250 (MQ=255) caataaatggcgatcgtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattctCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTc < 1:597736‑M2/52‑1 (MQ=255) caataaatggcgatcgtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTc < 1:277446‑M2/52‑1 (MQ=255) caataaatggcgatcgtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTc > 1:306224‑M2/199‑250 (MQ=255) cgatcgtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGc < 1:502369‑M2/62‑1 (MQ=255) tcgtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCgggg < 1:359662‑M2/66‑1 (MQ=255) gtgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCa > 1:155488‑M2/184‑251 (MQ=255) tgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCt < 1:561155‑M2/57‑1 (MQ=255) tgcgacaccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCaa > 1:802131‑M2/183‑251 (MQ=255) caccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAaata > 1:359179‑M2/178‑211 (MQ=255) caccaacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAAttttt < 1:4203‑M2/74‑1 (MQ=255) caacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGt > 1:799716‑M2/175‑251 (MQ=255) caacaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGt < 1:113250‑M2/77‑1 (MQ=255) acaccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTaa > 1:847412‑M2/173‑251 (MQ=255) ccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAAttt < 1:133584‑M2/72‑1 (MQ=255) ccaaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATg > 1:630469‑M2/170‑251 (MQ=255) aaagagccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGc > 1:344957‑M2/168‑250 (MQ=255) gccctgataatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAgg > 1:609458‑M2/163‑251 (MQ=255) taatccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAaataat < 1:66800‑M2/36‑1 (MQ=255) ccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTtcgtc < 1:188079‑M2/100‑1 (MQ=255) ccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTtcgtc < 1:505864‑M2/100‑1 (MQ=255) ccaccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTtcgt > 1:161510‑M2/152‑250 (MQ=255) caccaaggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTc < 1:576457‑M2/52‑1 (MQ=255) ggcttccgttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGgcgcg > 1:793463‑M2/145‑250 (MQ=255) gttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGc < 1:84028‑M2/19‑1 (MQ=255) gttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGc > 1:577653‑M2/138‑204 (MQ=255) gttaacgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTAt > 1:146200‑M2/138‑251 (MQ=255) cgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAaataat < 1:727568‑M2/36‑1 (MQ=255) cgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCgg > 1:476713‑M2/133‑234 (MQ=255) cgcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAAt < 1:426454‑M2/119‑1 (MQ=255) gcctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAAtt > 1:75469‑M2/132‑251 (MQ=255) cctgacgcatatctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTg > 1:14716‑M2/131‑251 (MQ=255) tctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAAt > 1:188991‑M2/120‑238 (MQ=255) tctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTg < 1:296534‑M2/121‑1 (MQ=255) tctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGtgc > 1:230020‑M2/120‑244 (MQ=255) tctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGtgc > 1:871353‑M2/120‑244 (MQ=255) ctaaaatccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAg > 1:319529‑M2/119‑161 (MQ=255) atccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTc > 1:823500‑M2/114‑165 (MQ=255) atccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAg > 1:2910‑M2/114‑250 (MQ=255) atccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAg > 1:668774‑M2/114‑250 (MQ=255) tccaagtggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGc > 1:632244‑M2/113‑250 (MQ=255) tggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCaa > 1:754110‑M2/107‑248 (MQ=255) tggttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCaa > 1:2484‑M2/107‑248 (MQ=255) gttggtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGccc > 1:271758‑M2/105‑244 (MQ=255) gtcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACGc < 1:732572‑M2/150‑1 (MQ=255) tcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACGcc < 1:776562‑M2/151‑1 (MQ=255) tcggctcgtccagcagcaaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACGCCt < 1:90098‑M2/152‑1 (MQ=255) aaattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACGCCTTTTGCCAACTGAATGGt < 1:858255‑M2/169‑1 (MQ=255) aattcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACGCCTTTTGCCAACTGAATGGTg > 1:890140‑M2/82‑251 (MQ=255) attcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACGCCTTTTGCCAACTGAATGGTgc < 1:759633‑M2/171‑1 (MQ=255) attcgggcgttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAACCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGCGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGCACGCCTTTTGCCAACTGAATGGTg > 1:850821‑M2/81‑250 (MQ=255) ttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTg > 1:818557‑M2/72‑216 (MQ=255) ttgccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACGCCTTTTGCCAACTGAATGGTGCCGCCGGTAg > 1:562699‑M2/72‑251 (MQ=255) gccacacgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGtgc > 1:319447‑M2/70‑194 (MQ=255) cgatgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTc > 1:640714‑M2/64‑115 (MQ=255) atgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGccc > 1:208586‑M2/62‑201 (MQ=255) atgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACGCCTTTTGCCAACTGAATgg > 1:415085‑M2/62‑229 (MQ=255) atgagcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACGCCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCgcgactt > 1:779908‑M2/62‑247 (MQ=255) gcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAg > 1:178452‑M2/58‑145 (MQ=255) gcgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACGCCTTTTGCCAACTGAATGGTGCCGCCGGTAgg > 1:667660‑M2/58‑238 (MQ=255) cgccagcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACGCCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTcgcccg > 1:68175‑M2/57‑251 (MQ=255) gcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTc < 1:372687‑M2/52‑1 (MQ=255) gcaccagacgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACGCCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCaat > 1:357022‑M2/52‑251 (MQ=255) cgcgctttttcgccgccggaaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGAAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACGCCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGAt < 1:87072‑M2/208‑1 (MQ=255) ttttcgccgccgaaaaaagaagcaaccggttgattctCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGTTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACGGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATACCCCACCTGTACCCCTTTTGCCACCTGAATGGTCCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGt < 1:766860‑M2/214‑1 (MQ=255) aaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAAt > 1:636517‑M2/25‑159 (MQ=255) aaaaagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACGCCTTTTGCCAACTGAATGGTgc < 1:743507‑M2/171‑1 (MQ=255) aagaagcaaccggttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACGCCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCg > 1:61013‑M2/22‑251 (MQ=255) accgggttgattccCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTTTTCCGTCTGTGGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCAAAATAGCCCACCTGTACGCCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTcc < 1:813471‑M2/237‑1 (MQ=255) ccggttaattctcTTTATCGCCGTAAACCGCAAATCCGCCCAAATAATCGGGCAGTTGTTTTTCCGTCTGTTGGGGGGCAATTTTTTGTAATTGCCGAAGGGCGTTTTGGTCGGCGCCCAAGGTATCCAATTGGTGCGGCGAGAAATGGCCCAACTGTCCGCCTTTTGCCAACTGTATGGTGCCGCCGGTAGGCGTTTTTTCTACCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTcccc < 1:513209/239‑1 (MQ=255) gttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACGCCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCcag > 1:574353‑M2/10‑250 (MQ=255) gttgattcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACGCCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCcag > 1:346410‑M2/10‑250 (MQ=255) ttgattcaCTTTATCGCCGTGAAACGAAAACCCGCCCAAATAACCGCGCAGTTGCTGTTCCGTCTGTTGGGGGGCATTTTTTTGTAAATGCCACGGGGCGCTTTCGTCGGCGCGCAACGTATCCAATGGGTGCTGCGCGAAATAGCCCAACTGTACGCCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCcagc < 1:661145‑M2/242‑1 (MQ=255) tttcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTGGCGGGGAAATTTTTTGTAAATGCCACAGGGCGCTTGCGCCGGCGCGCAACGTATCCAATTGGTGCTGCGCAAAATAGCCCAACTGTCCGCCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGAc < 1:223766‑M2/246‑1 (MQ=255) attcaCTTTATCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACGCCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCcagc > 1:873055‑M2/6‑247 (MQ=255) | TTGATAATCGCCCAAATCCCCTTTAAATTCCTCCACCTGCTTATCGTGCACCAAATAAAATTCATCTACTGTGTTACGCAATAAATGGCGATCGTGCGACACCAACACCAAAGAGCCCTGATAATCCACCAAGGCTTCCGTTAACGCCTGACGCATATCTAAAATCCAAGTGGTTGGTCGGCTCGTCCAGCAGCAGCAAATTCGGGCGTTGCCACACGATGAGCGCCAGCACCAGACGCGCTTTTTCGCCGTGAAACGCAAATCCGCCCAAATAATCGCGCAGTTGCTGTTCCGTCTGTTGCGGGGCAATTTTTTGTAAATGCCACAGGGCGCTTTCGTCGGCGCGCAACGTATCCAATTGGTGCTGCGCGAAATAGCCCAACTGTACGCCTTTTGCCAACTGAATGGTGCCGCCGGTAGGCGCGATTTCGCCCGCCAATAATTTGATTAAAGTAGATTTCCCCGCACCGTTTTTCCCCAGCAGAC > 1/423072‑423557 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |