| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 2,086,148 | A→G | intergenic (‑30265/–) | unknown ← / – | tRNA‑Met‑CAT/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 2,086,148 | 0 | A | G | 98.7% | 209.8 / NA | 76 | intergenic (‑30265/–) | unknown/– | tRNA‑Met‑CAT/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (31/44); minor base T (1/0); total (32/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.21e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
GGGTTTACAGGCTTCCGGCGAATTAATGGGCGGTATCGCCAAAAATCTGCAAAAAGGCGAAACCTGGGCGCCAATCGTGCCGATTACCCAAGCACCCGCCACTTGCTGGTATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTACAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGACATTCGCTTTGACGACGAACGCGAATTTACCCTTATCGCTCAAGATCTCGGCTTCCTACCGCAAGGCAAAAA > 1/2085902‑2086387 | gggTTTACAGGCTTCCGGCGAATTAATGGGCGGTATCGCCAAAAATCTGCAAAAAGGCGAAACCTGGGCGCCAATCGTGCCGATTACCCAAGCACCCGCCACTTGCTGGTATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAgg > 1:713060/1‑251 (MQ=255)gggTTTACAGGCTTCCGGCGAATTAATGGGCGGTATCGCCAAAAATCTGCAAAAAGGCGAAACCTGGGCGCCAATCGTGCCGATTACCCAAGCACCCGCCACTTGCTGGTATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAgg > 1:547457/1‑251 (MQ=255) ggCTTCCGGAGAATTAAGGGGCGGTACCGCCAAAAATCTGCAAAAAGGAGAACCCGGGGCGCCAATGGTGCCGATGACCAAGGCGCCCGCCACTTGCTGGTATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCaa < 1:108726/250‑1 (MQ=255) gctcccGGCGAATTAATGGGCGGTACCGCCAAAAACCTGCAAAAAGCCGAACCCTGGGCGCCAATCGTGCCGATTCCCCAAGCACCCGCCACTTGCTGGTATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGc < 1:319109/243‑1 (MQ=255) cTTCCGGCGAATTAATGGGCGGTATCGCCAAAAATCTGCAAAAAGGCGAACCCTGGGCGCCAATCGTGCCGATTCCCCAAGCACCCGCCACTTGCTGGTATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTc < 1:503070/251‑1 (MQ=255) gAATTAATGGGCGGTATCGCCAAAAATCTGCAAAAAGGCGAAACCTGGGCGCCAATCGTGCCGATTACCCAAGCACCCGCCACTTGCTGGTATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGa > 1:590736/1‑251 (MQ=255) gAATTAATGGGCGGTATCGCCAAAAATCTGCAAAAAGGCGAAACCTGGGCGCCAATCGTGCCGATTACCCAAGCACCCGCCACTTGCTGGTATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGa > 1:762241/1‑251 (MQ=255) ggTATCGCAAAAAACCGGCAAAAAGGCGAACCCTGGGCGCCAATCGTGCCGATTCCCCAAGCCCCCGCCACTTGCTGGTATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAAt < 1:24899/250‑1 (MQ=255) gtaccgcaaaaaaTCTGAAAAAAGGCGAAACCTGGGCGCCAATCGTGCCGATTCCCCAAGCACCCGCCACTTGCTGGTATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCa < 1:398672/218‑1 (MQ=255) ccAAAAATCTGCAAAAAGGCGAAACCTGGGCGCCAATCGTGCCGATTACCCAAGCACCCGCCACTTGCTGGTATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAg > 1:102093/1‑251 (MQ=255) atcggaaaaagGGCGAAACCGGGGCGCCAAGGGTCCCAATTCCCCAAACACCCGCCACTTGCTGGTATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAAt < 1:399417/245‑1 (MQ=255) cAAAAAGGCGAACCCTGGGCGCCAATCGTGCCGATTCCCCAAGCCCCCGCCACTTGCTGGTATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAAc < 1:57235/251‑1 (MQ=255) aaaaGGCGAACCCTGGGCGCCATTCGTGCCGATTACCCAAGCACCCGCCACTTGCTGGTATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCt < 1:669698/251‑1 (MQ=255) aaTCGTGCCGATTCCCCAAGCACCCGCCACTTGCTGGTATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTAt < 1:848186/251‑1 (MQ=255) ccGATTACCCAAGCACCCGCCACTTGCTGGTATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCaa > 1:638176/1‑251 (MQ=255) aCCCAAGCACCCGCCACTTGCTGGTATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTg > 1:838634/1‑241 (MQ=255) ccACTTGCTGGTATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTAt < 1:820484/251‑1 (MQ=255) cTTGCTGGTATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTa < 1:561274/251‑1 (MQ=255) tGGTATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAACCCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAaccgc < 1:725566/251‑1 (MQ=255) ggTATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAgg < 1:475130/166‑1 (MQ=255) tATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAaccgcac < 1:250974/250‑1 (MQ=255) cGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAaccgcac > 1:721400/1‑245 (MQ=255) cGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTg > 1:128481/1‑251 (MQ=255) ccTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTTCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAAACTCGCTCATCGGCGATCGGTTATTTGTCAACGGGCGAGAAGCCCCCTATTTAaccgcac > 1:31707/1‑243 (MQ=255) ccTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGat < 1:555366/137‑1 (MQ=255) cccTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTg < 1:803187/251‑1 (MQ=255) cccTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTg > 1:621258/1‑251 (MQ=255) ccTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTgc < 1:868554/251‑1 (MQ=255) cTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTgcg < 1:149091/251‑1 (MQ=255) gTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGttt > 1:344238/1‑238 (MQ=255) gcgTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTAc < 1:236457/250‑1 (MQ=255) gTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTAt > 1:100525/1‑211 (MQ=255) aTCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAAc < 1:26949/191‑1 (MQ=255) aTCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTAtt < 1:301225/210‑1 (MQ=255) aTCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAac > 1:863756/1‑214 (MQ=255) ttATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTccc < 1:883702/251‑1 (MQ=255) cgGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTcc < 1:481855/250‑1 (MQ=255) ggCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCTGCAAAAATACGGCGTGGAGGACATTCCGTTAATTTTTCAGGCTTTGCAACTCAACGGCGAAGGCGCGAAATTGTTTTAGCAAAATCAAACCCCGCTACTCAGCGTTCGTTTATTTGCCAAAGGGTGAGAAACCCCTTTTTTAACCGCACCGCGGGGTTTTGCGCGGTTAAGGTTACGGAACCCTTCCCTTTCCCg > 1:791932/1‑250 (MQ=255) cTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTTCGTTTACTGAACGCTTCCCTTTCCCGTg > 1:680399/1‑250 (MQ=255) cTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTg > 1:567968/1‑250 (MQ=255) gtgGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAaccgcac < 1:545438/199‑1 (MQ=255) gtgGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCg < 1:762345/245‑1 (MQ=255) gtgGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGGTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTa > 1:832154/1‑251 (MQ=255) ggCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTg > 1:747850/1‑224 (MQ=255) ggCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGa < 1:575353/250‑1 (MQ=255) gCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGAc < 1:304921/250‑1 (MQ=255) gCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGACa > 1:865171/1‑251 (MQ=255) gtgGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGGGCGCTTACGTTTACTGAACGCTTCCCTTTcc > 1:562831/1‑235 (MQ=255) tgGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGACATTCg < 1:90331/251‑1 (MQ=255) gATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGc < 1:492081/76‑1 (MQ=255) gATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCa < 1:377367/77‑1 (MQ=255) gTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAgg < 1:595089/82‑1 (MQ=255) gTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAAACTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGACATTCGCTTTGACGACGAACGCGAAttt > 1:234728/1‑251 (MQ=255) cAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGACATTCGCTTTGACGACGAACGCGAATTTAccc < 1:137224/251‑1 (MQ=255) cAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGACATTCGCTTTGACGACGAACGCGAATTTAccc < 1:346203/251‑1 (MQ=255) aaaCCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGaa < 1:731624/194‑1 (MQ=255) aaaCCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCg > 1:476511/1‑209 (MQ=255) ggCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGACATTCGCTTTGACGACGAACGCGAATTTACCCTTATCg < 1:640668/250‑1 (MQ=255) tGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTcc > 1:741700/1‑197 (MQ=255) aaaaTACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGt < 1:348199/154‑1 (MQ=255) aaaaTACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGACATTCGCTTTGACGACGAACGCGAATTTACCCTTATCGCTCAAGATCTCg > 1:113794/1‑251 (MQ=255) aaTACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGACATTCGCTTTGACGACGAACGCGAATTTACCCTTATCGCTCAAGATCTCgg > 1:532866/1‑250 (MQ=255) aaTACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGACATTCGCTTTGACGACGAACGCGAATTTACCCTTATCGCTCAAGATCTCgg > 1:638739/1‑250 (MQ=255) aaTACGGCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGACATTCGCTTTGACGACGAACGCGAATTTACCCTTATCGCTCAAGATCTCGGc < 1:555591/251‑1 (MQ=255) gCGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGACATTCGCTTTGACGACGAACGCGAATTTACCCTTATCGCTCAAGATCTCGGCTTCCTa > 1:59572/1‑251 (MQ=255) cGTGGATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGACATTCGCTTTGACGACGAACGCGAATTTACCCTTATCGCTCAAGATCTCGGCTTCCTAc < 1:727380/251‑1 (MQ=255) ggATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTAc < 1:130233/161‑1 (MQ=255) ggATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGACATTCGCTTTGACGACGAACGCGAATTTACCCTTATCGCTCAAGATCTCGGCTTCCTACCg > 1:521559/1‑250 (MQ=255) gATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTTATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGACATTCGCTTTGACGACGAACGCGAATTTACCCTTATCGCTCAAGATCTCGGCTTCCTACCGc < 1:443790/250‑1 (MQ=255) gATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGACATTCGCTTTGACGACGAACGCGAATTTAccc > 1:47951/1‑220 (MQ=255) gATGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGACATTCGCTTTGACGACGAACGCGAATTTACCCTTATCGCTCAAGATCTCGGCTTCCTACCGc < 1:37256/250‑1 (MQ=255) aTGACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTAc < 1:168172/159‑1 (MQ=255) gACATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGACATTCGCTTTGACGACGAACGCGAATTTACCCTTATc < 1:728431/222‑1 (MQ=255) aCATTCCGTTAATTTTGCAGGATATGCAACTCAACGGTGAAAGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGACATTCGCTTTGACGACGAACGCGAATTTACCCTTATCGCTCAAGATCTCGGCTTCCTACCGCAAgg > 1:639831/1‑250 (MQ=255) cATTCCGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTgcg < 1:325962/144‑1 (MQ=255) ccGTTAATTTTGCAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGACATTCGCTTTGACGACGAACGCGAATTTACCCTTATCGCTCAAGATCTCGGCTTCCTACCGCAAGGCaaaaa > 1:619231/1‑251 (MQ=255) | GGGTTTACAGGCTTCCGGCGAATTAATGGGCGGTATCGCCAAAAATCTGCAAAAAGGCGAAACCTGGGCGCCAATCGTGCCGATTACCCAAGCACCCGCCACTTGCTGGTATCACGCCTGCACCCTTGCCAGTGCGGCGTATCAAACTTATCGCGGGCTTGTGGGGCTGTGGCTGATTGAAGATAAAAACAGTGCCAAACCGGGCTTGCCGCAAAAATACGGCGTGGATGACATTCCGTTAATTTTACAGGATATGCAACTCAACGGCGAAGGCGCGCAATTGTTTCAGCAAAATCAAACCTCGCTCATCGGCGATCGTTTATTTGTCAACGGGCGAGAAGCCCCTTATTTAACCGCACCGCGTGGTTTGGTGCGCTTACGTTTACTGAACGCTTCCCTTTCCCGTGCCTACGACATTCGCTTTGACGACGAACGCGAATTTACCCTTATCGCTCAAGATCTCGGCTTCCTACCGCAAGGCAAAAA > 1/2085902‑2086387 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |