| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 2,085,140 | T→G | intergenic (‑29257/–) | unknown ← / – | tRNA‑Met‑CAT/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 2,085,140 | 0 | T | G | 98.8% | 234.1 / NA | 86 | intergenic (‑29257/–) | unknown/– | tRNA‑Met‑CAT/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base G (35/50); minor base A (1/0); total (36/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTCCTCGGCACGCTCTATTCTTTCATTCGTTTTCGTAACCCAAGTAACGTGGGCATTTTCGCCCGTTGGTTCGGTCGGCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGTAAGAAAAGCCTGATTTGGTTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTCGCGGACGCGGATTATTGCCGTTTAAAACCGGCGCCTTTCATGCTGCCATTGCTGCCGACGTGCCTGTCGTGCCGGTGGTCTGCTCCACTACAC > 1/2084894‑2085386 | gTCCTCGGCACGCTCTATTCTTTCATTCGTTTTCGTAACCCAAGTAACGTAGGCATTTTCGCCCGTTGGTTCGGTCGGCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGc > 1:31573/1‑250 (MQ=255) tCCTCGGCACGCTCTATTCTTTCATTCGTTTTCGTAACCCAAGTAACGTAGGCATTTTCGCCCGTTGGTTCGGTCGGCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGATGCCg > 1:298871/1‑251 (MQ=255) gCTCTATTCTTTCATTCGTTTTCGTAACCCAAGTAACGTAGGCATTTTCGCCCGTTGGTTCGGTCGGCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCa > 1:471554/1‑251 (MQ=255) gCTCTATTCTTTCATTCGTTTTCGTAACCCAAGTAACGTAGGCATTTTCGCCCGTTGGTTCGGTCGGCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCa > 1:224355/1‑251 (MQ=255) gCTCTATTCTTTCATTCGTTTTCGTAACCCAAGTAACGTAGGCATTTTCGCCCGTTGGTTCGGTCGGCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCa > 1:264025/1‑251 (MQ=255) ttCTTTCATTCGTTTTCGTAACCCAAGTAACGTAGGCATTTTCGCCCGTTGGTTCGGTCGGCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTtat < 1:113016/251‑1 (MQ=255) cTTTCATTCGTTTTCGTAACCCAAGTAACGTAGGCATTTTCGCCCGTTGGTTCGGTCGGCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTatat < 1:168821/251‑1 (MQ=255) cTTTCATTCGTTTTCGTAACCCAAGTAACGTAGGCATTTTCGCCCGTTGGTTCGGTCGGCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTatat < 1:199829/251‑1 (MQ=255) cTTTCATTCGTTTTCGTAACCCAAGTAACGTAGGCATTTTCGCCCGTTGGTTCGGTCGGCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTatat > 1:75366/1‑251 (MQ=255) cTTTCATTCGTTTTCGTAACCCAAGTAACGTAGGCATTTTCGCCCGTTGGTTCGGTCGGCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTatat < 1:600879/251‑1 (MQ=255) ttCGTAACCCAAGTAACGTAGGCATTTTCGCCCGTTGGTTCGGTCGGCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACggg > 1:745184/1‑250 (MQ=255) ttCGTAACCCAAGTAACGTAGGCATTTTCGCCCGTTGGTTCGGTCGGCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACggg > 1:569776/1‑250 (MQ=255) tCGTAACCCAAGTAACGTAGGCATTTTCGCCCGTTGGTTCGGTCGGCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCa > 1:672554/1‑251 (MQ=255) cccAAGTAACGTAGGCATTTTCGCCCGTTGGTTCGGTCGGCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATAttt > 1:28983/1‑251 (MQ=255) aaCGTAGGCATTTTCGCCCGTTGGTTCGGTCGGCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTatat > 1:362930/1‑225 (MQ=255) aaCGTAGGCATTTTCGCCCGTTGGTTCGGTCGGCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGa > 1:263417/1‑251 (MQ=255) aCGTAGGCATTTTCGCCCGTTGGTTCGGTCGGCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATAGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGAt > 1:481112/1‑251 (MQ=255) tGGTTCGGTCGGCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGc < 1:305430/251‑1 (MQ=255) ggTTCGGTCGGCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACggg < 1:488461/214‑1 (MQ=255) ggtcggCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTatat > 1:833154/1‑198 (MQ=255) tcggCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCacaac < 1:367432/250‑1 (MQ=255) tcggCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCacaac < 1:414637/250‑1 (MQ=255) gCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTCCCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCG‑TTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCcaca < 1:244221/244‑1 (MQ=255) tCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACgg < 1:652889/251‑1 (MQ=255) cGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGaa < 1:802677/251‑1 (MQ=255) cTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGaa > 1:123677/1‑249 (MQ=255) tCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCa < 1:93184/251‑1 (MQ=255) cTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCAcgccg < 1:871359/251‑1 (MQ=255) tCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATaaa < 1:438610/250‑1 (MQ=255) tCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAAt > 1:372469/1‑251 (MQ=255) caaaCATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATc < 1:291232/249‑1 (MQ=255) cGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATc < 1:58934/251‑1 (MQ=255) cGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATc < 1:657128/251‑1 (MQ=255) gAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCg < 1:43698/203‑1 (MQ=255) cATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGa > 1:52494/1‑251 (MQ=255) aTCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGAc < 1:42003/251‑1 (MQ=255) tCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGAc < 1:722967/250‑1 (MQ=255) gccgAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGAc < 1:558646/241‑1 (MQ=255) cgAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTAtt < 1:751266/251‑1 (MQ=255) gAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCacaac < 1:85280/202‑1 (MQ=255) aaTACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTg < 1:388848/251‑1 (MQ=255) gCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTa > 1:43209/1‑225 (MQ=255) gCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCg > 1:523484/1‑250 (MQ=255) cATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGAc > 1:166830/1‑214 (MQ=255) cATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCa > 1:495736/1‑251 (MQ=255) aTTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAg > 1:826947/1‑251 (MQ=255) tttATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGt < 1:109061/251‑1 (MQ=255) cGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTcgcggac < 1:471727/251‑1 (MQ=255) cGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTcgcggac < 1:397208/251‑1 (MQ=255) aaaTAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGc < 1:235141/115‑1 (MQ=255) aaaTAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTCGCGGACGCGGATTATTGc < 1:651875/251‑1 (MQ=255) aaaTAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTCGCGGACGCGGATTATTGc < 1:773646/251‑1 (MQ=255) aaaTAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTCGCGGACGCGGATTATTGc < 1:414028/251‑1 (MQ=255) aCGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGAc < 1:741619/157‑1 (MQ=255) atagTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATc > 1:506506/4‑175 (MQ=255) aTGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATc > 1:506540/1‑175 (MQ=255) ggTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAatat < 1:518331/105‑1 (MQ=255) ccATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTg > 1:87218/1‑187 (MQ=255) ttCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTCGCGGACGCGGATTATTGCCGTTGAAAACCGGCGCCTTTCAtg < 1:92976/251‑1 (MQ=255) ttCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTCGCGGACGCGGATTATTGCCGTTGAAAACCGGCGCCTTTCAtg < 1:739821/251‑1 (MQ=255) cTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTatat < 1:728451/77‑1 (MQ=255) cTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGc < 1:258816/82‑1 (MQ=255) cTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCacaac < 1:496534/131‑1 (MQ=255) cTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAacac < 1:708189/133‑1 (MQ=255) cTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGAc > 1:292386/1‑139 (MQ=255) cTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTa < 1:780696/177‑1 (MQ=255) cTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATg < 1:764423/185‑1 (MQ=255) cTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTCGCGGACGCGGATTATTGCCGTTGAAAAc < 1:684943/235‑1 (MQ=255) cTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTCGCGGACGCGGATTATTGCCGTTGAAAACCGGCGCCTTTCAtgc < 1:739742/250‑1 (MQ=255) cTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTCGCGGACGCGGATTATTGCCGTTGAAAACCGGCGCCTTTCAtg > 1:734407/1‑249 (MQ=255) cTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTCGCGGACGCGGATTATTGCCGTTGAAAACCGGCGCCTTTCAtg > 1:428339/1‑249 (MQ=255) cTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTCGCGGACGCGGATTATTGCCGTTGAAAACCGGCGCCTTTCAtg > 1:456852/1‑249 (MQ=255) cTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTCGCGGACGCGGATTATTGCCGTTGAAAACCGGCGCCTTTCAtg > 1:879467/1‑249 (MQ=255) cTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTCGCGGACGCGGATTATTGCCGTTGAAAACCGGCGCCTTTCAtg > 1:498474/1‑249 (MQ=255) cTTATATGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGCGCCGTTTTTCGGCATTTTATCTTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAg > 1:504947/1‑195 (MQ=255) tataTGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGCAGGCACTCGCAGTCGCGGACGCGGATTATTGCCGTTGAAAACCGGCGCCTTTCAtgctg > 1:228159/1‑250 (MQ=255) tGGTGATGCCGCGCACCGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTCGCGGACGCGGATTATTGCCGTTGAAAACCGGCGCCTTTCATGCTGCCAtt > 1:467023/1‑251 (MQ=255) ccGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTg < 1:747804/160‑1 (MQ=255) ccGTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAgg > 1:864830/1‑175 (MQ=255) gTCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGc > 1:249191/1‑59 (MQ=255) tCAGCGTCGGCAAGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTCGCGGACGCGGATTATTGCCGTTGAAAACCGGCGCCTTTCATGCTGCCATTGCTGCCGACGTGCCTGt < 1:849291/250‑1 (MQ=255) cggcaaGAAAAGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTCGCGGACGCGGATTATTGCCGTTGAAAACCGGCGCCTTTCATGCTGCCATTGCTGCCGACGTGCCTGTCGTGCCgg < 1:548456/247‑1 (MQ=255) aaaaGCCTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTCGCGGACGCGGATTATTGCCGTTGAAAACCGGCGCCTTTCATGCTGCCATTGCTGCCGACGTGCCTGTCGTGCCGGTGGTc < 1:396207/249‑1 (MQ=255) ccTGATTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTCGCGGACGCGGATTATTGCCGTTGAAAACCGGCGCCTTTCATGCTGCCATTGCTGCCGACGTGCCTGTCGTGCCGGTGGTCTGCTc < 1:179695/249‑1 (MQ=255) aTTTGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTCGCGGACGCGGATTATTGCCGTTGAAAACCGGCGCCTTTCATGCTGCCATTGCTGCCGACGTGCCTGTCGTGCCGGTGGTCTGCTCCACTa < 1:353316/250‑1 (MQ=255) ttGGGTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTCGCGGACGCGGATTATTGCCGTTGAAAACCGGCGCCTTTCATGCTGCCATTGCTGCCGACGTGCCTGTCGTGCCGGTGGTCTGCTCCACTacac < 1:722549/251‑1 (MQ=255) | GTCCTCGGCACGCTCTATTCTTTCATTCGTTTTCGTAACCCAAGTAACGTGGGCATTTTCGCCCGTTGGTTCGGTCGGCTATATCCGCTTTTCGGGCTGAACGTCGAACATCGCTACCCGCCGAATACCGACAAAATCGGGCGCTGCATTTATATCGGCAACCACCAAAATAACTACGACATGGTGACCATTTCTTATATGGTGATGCCGCGCACCGTCAGCGTCGGTAAGAAAAGCCTGATTTGGTTGCCGTTTTTCGGCATTTTATATTGGGCGACGGGCAATATTTTTCTGGATCGCGACAATCGCTCCAAAGCCCACAACACCATGACGGAACTGGCACGCCGCATAAATCAGGACAATCTGTCTATTTGGATGTTCCCGGAAGGCACTCGCAGTCGCGGACGCGGATTATTGCCGTTTAAAACCGGCGCCTTTCATGCTGCCATTGCTGCCGACGTGCCTGTCGTGCCGGTGGTCTGCTCCACTACAC > 1/2084894‑2085386 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |