| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 2,006,940 | G→A | intergenic (‑14232/+33737) | unknown ← / ← unknown | tRNA‑Lys‑TTT/tRNA‑Ser‑TGA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 2,006,940 | 0 | G | A | 100.0% | 110.6 / NA | 42 | intergenic (‑14232/+33737) | unknown/unknown | tRNA‑Lys‑TTT/tRNA‑Ser‑TGA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (21/21); total (21/21) | |||||||||||
AATAGAAACGCCCTTTTTGGCGATACCCTTCCAACAAGGTATTGCCCGTATCCAAGGTATATTGCACACCAAATCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGGATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATAAATTGACCATAAAAATGCAATGGAAACCATTTATAATAGAATTTAACAATTGAGTAAAGAAAATAAAATTCTACCTCAGAGAAAATAGCAGAATAAAACTCTGATTATTTAATAATTTCAGGAAATAATATTAAGATAAAAAATAAATAACCGGCA > 1/2006701‑2007143 | aaTAGAAACGCCCTTTTTGGCGATACCCTTCCAACAAGGTATTGCCCGTATCCAAGGTATATTGCACACCAAATCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTAc > 1:287550/1‑250 (MQ=255) aCCCTTCCAACAAGGTATTGCCCGTATCCAAGGTATATTGCACACCAAATCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATaaaa < 1:75430/251‑1 (MQ=255) cccTTCCAACAAGGTATTGCCCGTATCCAAGGTATATTGCACACCAAATCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAat > 1:782702/1‑251 (MQ=255) cccTTCCAACAAGGTATTGCCCGTATCCAAGGTATATTGCACACCAAATCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTAATCGCCCAAGTGAATTTTTCTACCAGATTTGACACTTCACTCATAAAat > 1:769419/1‑251 (MQ=255) ccTTCCAACAAGGTATTGCCCGTATCCAAGGTATATTGCACACCAAATCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAata < 1:684654/251‑1 (MQ=255) tCCAACAAGGTATTGCCCGTATCCAAGGTATATTGCACACCAAATCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATcc < 1:780639/251‑1 (MQ=255) tCCAACAAGGTATTGCCCGTATCCAAGGTATATTGCACACCAAATCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATcc < 1:290029/251‑1 (MQ=255) caacaaGGTATTGCCCGTATCCAAGGTATATTGCACACCAAATCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAGTGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCct > 1:435145/1‑250 (MQ=255) caacaaGGTATTGCCCGTATCCAAGGTATATTGCACACCAAATCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCctc < 1:364507/251‑1 (MQ=255) caacaaGGTATTCCCCGTATCCAAGGTATATTGCACACCAAATCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCct > 1:125272/1‑250 (MQ=255) tATTGCCCGTATCCAAGGTATATTGCACACCAAATCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATAAAt < 1:819500/251‑1 (MQ=255) tATTGCCCGTATCCAAGGTATATTGCACACCAAATCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATAAAt < 1:838354/251‑1 (MQ=255) tATTGCCCGTATCCAAGGTATATTGCACACCAAATCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATAAAt < 1:367541/251‑1 (MQ=255) gCCCGTATCCAAGGTATATTGCACACCAAATCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGaaa < 1:720702/218‑1 (MQ=255) cccGTATCCAAGGTATATTGCACACCAAATCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAGCAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCTCCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCGCTCATAAAATATCCTCTTATAAAt < 1:739511/246‑1 (MQ=255) ccAAGGTATATTGCACACCAAATCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATAAATTGACCATaaaaa < 1:794570/251‑1 (MQ=255) aaGGTATATTGCACACCAAATCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACCCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAACGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCATTCATAAAATATCCTCTTATAAAt > 1:491407/1‑237 (MQ=255) gTATATTGCACACCAAATCGGAAAAAAGGATATTTGAATAAATTGACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAata > 1:701958/1‑221 (MQ=255) ttGCACACCAAATCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATAAAt > 1:543453/1‑229 (MQ=255) cacCAAATCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATAAATTGACCATAAAAATGCAATGGAAACCAt > 1:865850/1‑251 (MQ=255) aaTCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATAAATTGACCATAAAAATGc < 1:875721/234‑1 (MQ=255) tCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATAAATTGACCATAAAAATGCAATGGAAACCATTTataat < 1:413391/251‑1 (MQ=255) gAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATAAATTGACCATAAAAATGCAATGGAAACCATTTATAATAg < 1:115955/250‑1 (MQ=255) aaaTTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATAAATTGACCATAAAAATGCAATGGAAACCATTTATAATAGAATTTAACAATTGAGTAAAg > 1:640517/1‑251 (MQ=255) ggATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATaaaa < 1:307058/170‑1 (MQ=255) ggATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATaaa > 1:420325/1‑184 (MQ=255) ggATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATAAAt < 1:488576/185‑1 (MQ=255) ggATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATAAATTGACCATAAAAATGCAATGGAAACCATTTATAATAGAATTTAAc > 1:133418/1‑229 (MQ=255) ggATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATAAATTGACCATAAAAATGCAATGGAAACCATTTATAATAGAATTTAACAATTGAGTAAAGaaaataaaat > 1:366687/1‑251 (MQ=255) tAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAAc > 1:445383/1‑154 (MQ=255) cACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATAAATTGACCATAAAAATGCAATGGAAACCATTTATAATAGAATTTAACAATTGAGTAAAGAAAATAAAATTCTACCTCAgaga > 1:755800/1‑251 (MQ=255) cACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATAAATTGACCATAAAAATGCAATGGAAACCATTTATAATAGAATTTAACAATTGAGTAAAGAAAATAAAATTCTACCTCAgaga > 1:491915/1‑251 (MQ=255) aCCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATaaaa < 1:538006/145‑1 (MQ=255) aCCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCct > 1:309678/1‑151 (MQ=255) aCCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATaaa > 1:865814/1‑159 (MQ=255) aaaTTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCctct < 1:445370/148‑1 (MQ=255) ggCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCGGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATAAATTGACCATAAAAATg < 1:405097/159‑1 (MQ=255) ggCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATAAATTGACCATAAAAATGCAATGGAAACCATTTataat < 1:47903/179‑1 (MQ=255) ataataTGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATAAATTGACCATAAAAATGCAATGGAAACCATTTATAATAg > 1:558845/1‑165 (MQ=255) gcagcTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCACCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATcc > 1:238716/1‑98 (MQ=255) ccATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGaaa < 1:305312/69‑1 (MQ=255) ccATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGAATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATAAATTGACCATAAAAATGCAATGGAAACCATTTATAATAGAATTTAACAATTGAGTAAAGAAAATAAAATTCTACCTCAGAGAAAATAGCAGAATAAAACTCTGATTATTTAATAATTTCAGGAAATAATATTAAGATAAAAAATAAATAACCGGCa > 1:249026/1‑251 (MQ=255) | AATAGAAACGCCCTTTTTGGCGATACCCTTCCAACAAGGTATTGCCCGTATCCAAGGTATATTGCACACCAAATCGGAAAAAAGGATATTTGAATAAATTAACCAGGATAACAATGCTCACCAACTCCCAACCATAAATTGCACCGGCTTGGGTTGAAGCGATAATATGCGAACCACCGACAGCAGCTGACGCCATGACAATGCCCGGACCTAAGGCAGAAAATTTACTCGCCCAAGTGGATTTTTCTACCAGATTTGAAACTTCACTCATAAAATATCCTCTTATAAATTGACCATAAAAATGCAATGGAAACCATTTATAATAGAATTTAACAATTGAGTAAAGAAAATAAAATTCTACCTCAGAGAAAATAGCAGAATAAAACTCTGATTATTTAATAATTTCAGGAAATAATATTAAGATAAAAAATAAATAACCGGCA > 1/2006701‑2007143 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |