| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,909,743 | G→A | intergenic (+114816/‑24588) | unknown → / → unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,909,743 | 0 | G | A | 100.0% | 224.5 / NA | 81 | intergenic (+114816/‑24588) | unknown/unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (28/53); total (28/53) | |||||||||||
ATAAACTGCGGTTAAATTTTGGAGCGCTTTTTTCTGTTTATTGTTGAATTAATATCGCATTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACGGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATACCCTAGCGGAGTGCTTTCTTTTGCCTACCTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAGTAGGTCGATGCCGAAACAAACCTATTTATATCGCTTCTTACCACTTTCCTGATCTAA‑CCCCCGCAGCCATTCCAACTTCTCCTTAATC > 1/1909497‑1909988 | aTAAACTGCGGTTAAATTTTGGAGCGCTTTTTTCTGTTTATTGTTGAATTAATATCGCATTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGa < 1:372839/251‑1 (MQ=255) tAAACTGCGGTTAAATTTTGGAGCTCTTTTTTCTGTTTATTGTTGAATTAATATCGCATTTCGCCGATGGCGACCTTCTTTTTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGat < 1:451302/251‑1 (MQ=255) cTGCGGTTAAATTTTGGAGCGCTTTTTTCTGTTTATTGTTGAATTAATATCGCATTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGataaat < 1:344538/251‑1 (MQ=255) cTGCGGTTAAATTTTGGAGCGCTTTTTTCTGTTTATTGTTGAATTAATATCGCATTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGataaat < 1:636100/251‑1 (MQ=255) cTGCGGTTAAATTTTGGAGCGCTTTTTTCTGTTTATTGTTGAATTAATATCGCATTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGataaat < 1:259925/251‑1 (MQ=255) cGGTTAAATTTTGGAGCGCTTTTTTCTGTTTATTGTTGAATTAATATCGCATTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGataaataa < 1:26623/250‑1 (MQ=255) gTTAAATTTTGGAGCGCTTTTTTCTGTTTATTGTTGAATTAATATCGCCTTTCGCCGATGTCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATca > 1:782160/1‑251 (MQ=255) gTTAAATTTTGGAGCGCTTTTTTCTGTTTATTGTTGAATTAATATCGCATTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATc < 1:38602/250‑1 (MQ=255) aTTTTGGAGCGCTTTTTTCTGTTTATTGTTGAATTAATATCGCATTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGataaataa < 1:22080/243‑1 (MQ=255) aTTTTGGAGCGCTTTTTTCTGTTTATTGTTGAATTAATATCGCATTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACaaa > 1:830266/1‑251 (MQ=255) gTTTATTGTTGAATTAATATCGCATTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGataaataa < 1:245948/223‑1 (MQ=255) gTTTATTGTTGAATTAATATCGCATTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCa > 1:101796/1‑251 (MQ=255) tttATTGTTGAATTAATATCGCATTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCa < 1:887960/250‑1 (MQ=255) ttgttgAATTAATATCGCATTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGccc < 1:614025/251‑1 (MQ=255) gttgAATTAATATCGCATTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTa > 1:430480/1‑251 (MQ=255) tgAATTAATATCGCATTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGc < 1:179156/251‑1 (MQ=255) aaTTAATATCGCATTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGataaataa < 1:114236/212‑1 (MQ=255) aTTAATATCGCATTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCa > 1:670840/1‑239 (MQ=255) ttAATATCGCATTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGAATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAg < 1:696312/251‑1 (MQ=255) aaTATCGCATTTCGGCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGGTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTg < 1:590892/251‑1 (MQ=255) aaTATCGCATTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTg > 1:314264/1‑251 (MQ=255) atatCGCATTTCGCCGATGGCTACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCAACGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGa > 1:216166/1‑200 (MQ=255) atCGCATTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGctt > 1:97647/1‑251 (MQ=255) gCATTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGcttt > 1:330658/1‑249 (MQ=255) aTTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGGCTACACTTTTATCATGCCCTAGCGGAGTGctttcttt < 1:838739/251‑1 (MQ=255) aCCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACttttcttt > 1:895995/1‑251 (MQ=255) aCCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACttttcttt < 1:472519/251‑1 (MQ=255) tctttcttTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTAt > 1:78003/1‑207 (MQ=255) ttctttTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAg > 1:388063/1‑251 (MQ=255) tctttTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCgg > 1:788560/1‑216 (MQ=255) cttgcCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGAc < 1:324652/250‑1 (MQ=255) cttgcCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGAc < 1:208882/250‑1 (MQ=255) gcCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAg < 1:311006/208‑1 (MQ=255) cccAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCa > 1:347961/1‑194 (MQ=255) aaagaaagAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCAACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAACCAAAGACAAAATCCaa > 1:378478/1‑251 (MQ=255) gaaagaaGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCa < 1:555328/187‑1 (MQ=255) aaagaaGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGAt < 1:411442/251‑1 (MQ=255) ggCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACaacgttcaaaatccttgga > 1:632237/1‑234 (MQ=255) ggCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGaa > 1:384476/1‑251 (MQ=255) gCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGaa < 1:313879/250‑1 (MQ=255) aGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGaa > 1:260958/1‑246 (MQ=255) gAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGataaataa < 1:262358/146‑1 (MQ=255) gAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATc < 1:589151/148‑1 (MQ=255) ggCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTg > 1:899439/1‑250 (MQ=255) ccGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATgg < 1:27288/251‑1 (MQ=255) aTAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTAc < 1:516469/250‑1 (MQ=255) aTAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTAc < 1:161260/250‑1 (MQ=255) tAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTCCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGa < 1:867047/251‑1 (MQ=255) gCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGt > 1:269225/1‑251 (MQ=255) ccGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAg < 1:217741/249‑1 (MQ=255) gCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATc < 1:212529/150‑1 (MQ=255) tCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAagcgc < 1:855722/251‑1 (MQ=255) ttttttAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAagcgcagcgc < 1:801332/251‑1 (MQ=255) tAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTaa < 1:526364/251‑1 (MQ=255) aaTTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAGt < 1:694132/251‑1 (MQ=255) aTTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAGTa < 1:699797/251‑1 (MQ=255) tttCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAGTAGGt < 1:796916/251‑1 (MQ=255) aCTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAGTAGGTCGATGCCGAAACAAACCTAttt < 1:735994/251‑1 (MQ=255) tCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAGTAGGTCGATGCCGAAACAAACCTATTtat < 1:166590/251‑1 (MQ=255) ccGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAGTAGGTCGATGCCGAAACAAACCTATTtata > 1:85728/1‑251 (MQ=255) gCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGa > 1:102754/1‑165 (MQ=255) gCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGa > 1:22000/1‑195 (MQ=255) cTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTa < 1:563371/179‑1 (MQ=255) cTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAGTAGGTCGATGCCGAAACAAACCTATTTATATCGCTTCTTACCAc < 1:724630/250‑1 (MQ=255) cTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAGTAGGTCGATGCCGAAACAAACCTATTTATATCGCTTCTTACCAc < 1:894867/250‑1 (MQ=255) cTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAGTAGGTCGATGCCGAAACAAACCTATTTATATCGCTTCTTACCACt < 1:536749/251‑1 (MQ=255) ggCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAg < 1:671876/204‑1 (MQ=255) cGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAGTAGGTCGATGCCGAAACAAACCTATTTATATCGCTTCTTACCACTTTcc < 1:332350/251‑1 (MQ=255) tAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATA‑‑‑AATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAGTAGGTCGATGCCGAAACAAACCTATTTATATCGCTTCTTACCACTTTCCTGATc < 1:750604/251‑1 (MQ=255) cTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAGTAGGTCGATGCCGAAACAAACCTATTTATATCGCTTCTTACCACTTTCCTGATc < 1:510783/251‑1 (MQ=255) ccTTAAAAAAATGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAGTAGGTCGATGCCGAAACAAACCTATTTATATCGCTTCTTACCACTTTCCTGATCTAA‑CCCCCGCAGcc < 1:673739/251‑1 (MQ=255) aaaaaaaTGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAGTAGGTCGATGCCGAAACAAACCTATTTATATCGCTTCTTACCACTTTCCTGATCTAA‑CCCCCGCAGCCATTc < 1:607245/251‑1 (MQ=255) aTGGGCGTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAGTAGGTCGATGCCGAAACAAACCTATTTATATCGCTTCTTACCACTTTCCTGATCTAA‑CCCCCGCAGCCATTCCAACtt < 1:319655/251‑1 (MQ=255) gTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCt > 1:699992/1‑128 (MQ=255) gTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAg > 1:508470/1‑167 (MQ=255) gTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAGTAGGTCGATGCCGAAACAAACCTATTTATATCGCTTCTTACCACTTTCCTGATCTAACCCCCCGCAGCCATTCCAACTtctc > 1:756039/1‑249 (MQ=255) gTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAGTAGGTCGATGCCGAAACAAACCTATTTATATCGCTTCTTACCACTTTCCTGATCTAA‑cc < 1:132088/226‑1 (MQ=255) gTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAGAAGGTCGATGCCGAAACAAACCTATTTATATCGCTTCTTACCACTTTCCTGATCTAA‑CCCCCGCACCCATTCCAACTTCTCctt > 1:888035/1‑251 (MQ=255) gTCTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTCGAACGTTGGCTTTGCCAATGGTACGAAg < 1:100199/145‑1 (MQ=255) cTTACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAGTa > 1:509154/1‑167 (MQ=255) tACACAGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATGCCCTAGCGGAGTGCTTTCTTTTGCCTACTTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAGTAGGTCGATGCCGAAACAAACCTATTTATATCGCTTCTTACCACTTTCCTGATCTAA‑CCCCCGCAGCCATTCCAACTTCTCcttaatc < 1:7748/251‑1 (MQ=255) | ATAAACTGCGGTTAAATTTTGGAGCGCTTTTTTCTGTTTATTGTTGAATTAATATCGCATTTCGCCGATGGCGACCTTCTTTCTTTTGCTTGCCCAAAAGAAAGAAGGCAAAGAAAAAGGCACCCCGGATAAGCCGCTTTTCCCTTTTTTTAAGAATTTTTCTTAACGAAAAGTTAGCAGACTCCGCCTAACGCATCGCTGGCGTAACTTTCCTAAAAAATCCTTAAAAAAATGGGCGTCTTACACGGGGATAAATAATCAACAAAAACCGACTACACTTTTATCATACCCTAGCGGAGTGCTTTCTTTTGCCTACCTTTCTTTTCACAAGCAAAGACAAAATCCAAGGATTTTGAACGTTGGCTTTGCCAATGGTACGAAGTGCAAGCGCAGCGCAGTAAAAGTAGGTCGATGCCGAAACAAACCTATTTATATCGCTTCTTACCACTTTCCTGATCTAA‑CCCCCGCAGCCATTCCAACTTCTCCTTAATC > 1/1909497‑1909988 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |