| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,880,230 | C→T | intergenic (+85303/‑54101) | unknown → / → unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,880,230 | 0 | C | T | 100.0% | 230.6 / NA | 85 | intergenic (+85303/‑54101) | unknown/unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (43/42); total (43/42) | |||||||||||
TTGTGGGCATTCAACCGGATCTGGTTTCCTTCGGTTTTCCCATGACCGATGCCGTCAAAGAATCCGTGCAGTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGACATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACGCTTACTGCCTCGCCTTCCTCCGATCTGCTTGGAAAAATGCTAAAAATCAGCATTATTAAAAAGGT > 1/1879983‑1880469 | ttGTGGGCATTCAACCGGATCTGGTTTCCTTCGGTTTTCCCATGACCGATGCCGTCAAAGAATCCGTGCAGTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATAtt > 1:846129/1‑251 (MQ=255) tgtgGGCATTCAACCGGATCTGGTTTCCTTCGGTTTTCCCATGACCGATGCCGTCAAAGAATCCGTGCAGTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTc < 1:102166/251‑1 (MQ=255) ggCATTCAACCGGATCTGGTTTCCTTCGGTTTTCCCATGACCGATGCCGTCAAAGAATCCGTGCAGTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAAc < 1:224566/250‑1 (MQ=255) tCTGGTTTCCTTCGGTTTTCCCATGACCGATGCCGTCAAAGAATCCGTGCAGTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGata > 1:86466/1‑251 (MQ=255) ttCCTTCGGTTTTCCCATGACCGATGCCGTCAAAGAATCCGTGCAGTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAAc < 1:805002/251‑1 (MQ=255) ttttCCCATGACCGATGCCGTCAAAGAATCCGTGCAGTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAAc < 1:331584/251‑1 (MQ=255) ttttCCCATGACCGATGCCGTCAAAGAATCCGTGCAGTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAAc < 1:641591/251‑1 (MQ=255) ttCCCATGACCGATGCCGTCAAAGAATCCGTGCAGTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAAc < 1:581928/249‑1 (MQ=255) tCCCATGACCGATGCCGTCAAAGAATCCGTGCAGTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGat > 1:541239/1‑232 (MQ=255) tCCCATGACCGATGCCGTCAAAGAATCCGTGCAGTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAgg > 1:825800/1‑251 (MQ=255) ccATGACCGATGCCGTCAAAGAATCCGTGCAGTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGat < 1:247051/251‑1 (MQ=255) gACCGATGCCGTCAAAGAATCCGTGCAGTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAAcc > 1:627310/1‑213 (MQ=255) ccGATGCCGTCAAAGAATCCGTGCAGTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGaa < 1:533961/251‑1 (MQ=255) cGATGCCGTCAAAGAATCCGTGCAGTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGaaa < 1:80251/251‑1 (MQ=255) tGCCGTCAAAGAATCCGTGCAGTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATc < 1:486693/251‑1 (MQ=255) ccGTCAAAGAATCCGTGCAGTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAAc > 1:543152/1‑213 (MQ=255) cAAAGAATCCGTGCAGTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAg > 1:85984/1‑251 (MQ=255) gTGCAGTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAg > 1:158437/1‑250 (MQ=255) tGCAGTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGc < 1:310105/250‑1 (MQ=255) gTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGc > 1:789193/1‑246 (MQ=255) gTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAAt > 1:765593/1‑250 (MQ=255) gTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAAt > 1:656290/1‑250 (MQ=255) gtatgATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAg > 1:174376/1‑190 (MQ=255) tttAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCat < 1:32884/251‑1 (MQ=255) acggacggacgCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAGCCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGc < 1:595656/223‑1 (MQ=255) acggacggacgCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATaaaa < 1:557216/249‑1 (MQ=255) acggacggacgCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAAc < 1:569913/250‑1 (MQ=255) acggacggacgCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAAc < 1:6280/250‑1 (MQ=255) cgCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAAc < 1:308720/241‑1 (MQ=255) cTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGt < 1:4969/206‑1 (MQ=255) gaTTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAAt > 1:865460/1‑251 (MQ=255) gaTTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAAt > 1:746378/1‑251 (MQ=255) ttCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATta > 1:21609/1‑251 (MQ=255) gttgtAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAAc > 1:565828/1‑222 (MQ=255) gttgtAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATta > 1:176128/1‑244 (MQ=255) gttgtAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTgg > 1:117450/1‑251 (MQ=255) ttgtAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTgg > 1:658595/1‑250 (MQ=255) ttgtAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGc < 1:833892/251‑1 (MQ=255) gtAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAg > 1:376184/1‑251 (MQ=255) tAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGt > 1:160536/1‑251 (MQ=255) gAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAAc < 1:450799/215‑1 (MQ=255) aaaaGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCgg < 1:655595/250‑1 (MQ=255) cGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTa < 1:289177/251‑1 (MQ=255) ggTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTAt > 1:842452/1‑251 (MQ=255) tGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTAttt < 1:208735/251‑1 (MQ=255) gggTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGtttt < 1:586359/173‑1 (MQ=255) gggTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTAtttt > 1:856108/1‑251 (MQ=255) gggTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTAtttt > 1:384321/1‑251 (MQ=255) ggCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAAc < 1:49891/137‑1 (MQ=255) ggCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTcc > 1:756849/1‑247 (MQ=255) gCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGat > 1:259634/1‑141 (MQ=255) tCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGat > 1:116462/1‑134 (MQ=255) cAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAAc < 1:173746/179‑1 (MQ=255) cAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGc < 1:229352/248‑1 (MQ=255) cAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTAt > 1:342228/1‑251 (MQ=255) gCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTTAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTc > 1:486903/1‑185 (MQ=255) gCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTAttt > 1:189263/1‑251 (MQ=255) cTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTa < 1:425613/220‑1 (MQ=255) aCATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTaa > 1:177905/1‑251 (MQ=255) aCATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTaa > 1:109572/1‑251 (MQ=255) aTAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACg > 1:308905/1‑251 (MQ=255) aTAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACg < 1:700621/251‑1 (MQ=255) cgcgAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACGCTTAc < 1:627016/251‑1 (MQ=255) cTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAAc < 1:360898/156‑1 (MQ=255) gAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTc < 1:457159/161‑1 (MQ=255) gAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGc < 1:236458/183‑1 (MQ=255) aaaaTATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAATCTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACGCTTACTGCCTCGCCTtcctc < 1:808331/251‑1 (MQ=255) aaaaTATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACGCTTACTGCCTCGCCTtcctc < 1:753432/251‑1 (MQ=255) aaaTATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACGc < 1:439992/231‑1 (MQ=255) atatGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACGCTTACTGCCTCGCCTTCCTCCGa > 1:92683/1‑251 (MQ=255) atGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACGCTTACTGCCTCGCCTTCCTCCGATc < 1:984/251‑1 (MQ=255) cTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACGCTTACTGCCTCGCCTTCCTCCGATCTGCTTGGaa > 1:836250/1‑251 (MQ=255) aaaTAGAATATTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACGCTTACTGCCTCGCCTTCCTCCGATCCGCTTGGaaa > 1:284037/1‑239 (MQ=255) atatTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACGCTTACTGCCTCGCCTtcctc > 1:91681/1‑217 (MQ=255) atatTCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACGCTTACTGCCTCGCCTTCCTCCGATCTGCTTGGAAAAATGCTAAAAATCAGCatt > 1:533841/1‑251 (MQ=255) tCAAACTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACGCTTACTGCCTCGCCTTCCTCCGATCTGCTTGGAAAAATGCTAAAAATCAGCAttatta < 1:664918/251‑1 (MQ=255) cTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACGCTTACTGCCTCGCCTTCCTCCGATCTGCTTGGAAAAATGCTAAAAATCAGCat < 1:465112/241‑1 (MQ=255) cTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACGCTTACTGCCTCGCCTTCCTCCGATCTGCTTGGAAAAATGCTAAAAATCAGCATTATTAAAAAg > 1:758937/1‑251 (MQ=255) cTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACGCTTACTGCCTCGCCTTCCTCCGATCTGCTTGGAAAAATGCTAAAAATCAGCATTATTAAAAAg > 1:736625/1‑251 (MQ=255) cTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACGCTTACTGCCTCGCCTTCCTCCGATCTGCTTGGAAAAATGCTAAAAATCAGCATTATTAAAAAg < 1:342311/251‑1 (MQ=255) cTTAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTG‑AAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACGCTTACTGCCTCGCCTTCCTCCGATCTGCTTGGAAAAATGCTAAAAATCAGCATTATTAAAAAgg > 1:299425/1‑251 (MQ=255) tAAAATCAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACGCTTACTGCCTCGCCTTCCTCCGATCTGCTTGGAAAAATGCTAAAAATCAGCATTATTAAAAAGGt < 1:398303/251‑1 (MQ=255) cAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTa > 1:540546/1‑145 (MQ=255) cAGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACg > 1:815295/1‑180 (MQ=255) aGGATATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACGc < 1:431615/180‑1 (MQ=255) | TTGTGGGCATTCAACCGGATCTGGTTTCCTTCGGTTTTCCCATGACCGATGCCGTCAAAGAATCCGTGCAGTTTATGTATGATTTTTTAAAAGACGGACGGACGCTTGCGGAGATTCCGGTGTTGTAAGAAAAGTGCGGTGGGTTTTGGGCGTAAATCCGGCAACAGCTACATAATCGCGAAAAACACTTGAAAATATGACCGCACTTTTTTGCCGAAAAATAGAATATTCAAACTTAAAATCAGGACATTCAACCTGAAAAACAGGATATTCAACCTAAAAAACAGGATATTGAAAATCTGAAAGACGTTTTAGCAAATCAAAAAGGGCTTTCATATAAAACTATCAGTCACATTGAAAAATTATATCTGGCAGTCGGTTATTCTATTTTTTCCCGCGCTGACCTTATTGCTATTTTAACGCTTACTGCCTCGCCTTCCTCCGATCTGCTTGGAAAAATGCTAAAAATCAGCATTATTAAAAAGGT > 1/1879983‑1880469 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |