| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,856,836 | T→C | intergenic (+61909/‑77495) | unknown → / → unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,856,836 | 0 | T | C | 100.0% | 232.4 / NA | 82 | intergenic (+61909/‑77495) | unknown/unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (42/40); total (42/40) | |||||||||||
CCAGGTTTTTAACGTGGTTTTGGTGTCCATTTCCAAGAAACGGCTTATTAACCAGAAACCGCTGTCGTTCACATGGGAGAATACGGTGGCGCCGGAGGCAATGGCAATCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGTGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACTGCGTTCTCCGCGCAATAAGGCAATGGCAATTAATAATGTGATTAATAACGCGATCGGGGTTTTGCCGATGAGG > 1/1856591‑1857074 | ccAGGTTTTTAACGTGGTTTTGGTGTCCATTTCCAAGAAACGGCTTATTAACCAGAAACCGCTGTCGTTCACATGGGAGAATACGGTGGCGCCGGAGGCAATGGCAATCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGcgatga < 1:218596/251‑1 (MQ=255) ggTTTTTAACGTGGTTTTGGTGTCCATTTCCAAGAAACGGCTTATTAACCAGAAACCGCTGTCGTTCACATGGGAGAATACGGTGGCGCCGGAGGCAATGGCAATCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGcgatgatga > 1:246926/1‑251 (MQ=255) ggTTTTTAACGTGGTTTTGGTGTCCATTTCCAAGAAACGGCTTATTAACCAGAAACCGCTGTCGTTCACATGGGAGAATACGGTGGCGCCGGAGGCAATGGCAATCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGcgatga < 1:600846/248‑1 (MQ=255) cGTGGTTTTGGTGTCCATTTCCAAGAAACGGCTTATTAACCAGAAACCGCTGTCGTTCACATGGGAGAATACGGTGGCGCCGGAGGCAATGGCAATCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATAc < 1:600222/251‑1 (MQ=255) tgtCCATTTCCAAGAAACGGCTTATTAACCAGAAACCGCTGTCGTTCACATGGGAGAATACGGTGGCGCCGGAGGCAATGGTAATCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGac < 1:428178/251‑1 (MQ=255) ccATTTCCAAGAAACGGCTTATTAACCAGAAACCGCTGTCGTTCACATGGGAGAATACGGTGGCGCCGGAGGCAATGGCAATCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGaca‑ac < 1:244556/251‑1 (MQ=255) gAAACGGCTTATTAACCAGAAACCGCTGTCGTTCACATGGGAGAATACGGTGGCGCCGGAGGCAATGGCAATCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATa > 1:462480/1‑251 (MQ=255) aaCGGCTTATTAACCAGAAACCGCTGTCGTTCACATGGGAGAATACGGTGGCGCCGGAGGCAATGGCAATCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAAc < 1:781982/251‑1 (MQ=255) cGGCTTATTAACCAGAAACCGCTGTCGTTCACATGGGAGAATACGGTGGCGCCGGAGGCAATGGCAATCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTc < 1:420773/251‑1 (MQ=255) cGTTCACATGGGAGAATACGGTGGCGCCGGAGGCAATGGCAATCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAAt > 1:217128/1‑251 (MQ=255) tCACATGGGAGAATACGGTGGCGCCGGAGGCAATGGCAATCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCAGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAAc > 1:34363/1‑221 (MQ=255) acaTGGGAGAATACGGTGGCGCCGGAGGCAATGGCAATCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCAt > 1:847229/1‑191 (MQ=255) caTGGGAGAATACGGTGGCGCCGGAGGCAATGGCAATCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCa > 1:287461/1‑251 (MQ=255) aTGGGAGAATACGGTGGCGCCGGAGGCAATGGCAATCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCgcctttattatttctatggcattgcg < 1:245245/251‑26 (MQ=255) tGGGAGAATACGGTGGCGCCGGAGGCAATGGCAATCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCAc > 1:597803/1‑250 (MQ=255) ggAGAATACGGTGGCGCCGGAGGCAATGGCAATCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCgatgatgat < 1:342929/180‑1 (MQ=255) ggAGAATACGGTGGCGCCGGAGGCAATGGCAATCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGa > 1:595043/1‑251 (MQ=255) gagaATACGGTGGCGCCGGAGGCAATGGCAATCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGaa > 1:786756/1‑251 (MQ=255) gaATACGGTGGCGCCGGAGGCAATGGCAATCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACa > 1:257583/1‑251 (MQ=255) gaATACGGTGGCGCCGGAGGCAATGGCAACCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACa > 1:329267/1‑251 (MQ=255) ggcaatCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGac > 1:813198/1‑172 (MQ=255) aatCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAaataa < 1:707340/251‑1 (MQ=255) cACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATgg < 1:310198/251‑1 (MQ=255) cGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATAc < 1:697262/208‑1 (MQ=255) cGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAg < 1:65384/251‑1 (MQ=255) aTAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCa > 1:602145/1‑251 (MQ=255) aCATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCg > 1:378848/1‑251 (MQ=255) aCATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCg > 1:845416/1‑251 (MQ=255) aTCCCATTGGCTGAGATCGGTTGCGTCTTCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCTAACCTTGTGCCACACGCAACGCCATAGAAATAATAAAGGCGGCGACCCTGATCGGCACACCGTTCTTTTACACACAT‑TCTTATCACTCATCCCCGATGCCGCTTGCGCGCATTACGCCACCTAACATACCGGCCGCACCGGTc > 1:190387/1‑223 (MQ=255) ggCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATAccgcc > 1:734655/1‑205 (MQ=255) gCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAAc < 1:788346/196‑1 (MQ=255) gCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATgg > 1:266700/1‑227 (MQ=255) gagaTCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAaataa > 1:764854/1‑221 (MQ=255) gagaTCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTa > 1:515456/1‑250 (MQ=255) aTCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACaa < 1:778140/250‑1 (MQ=255) gTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGc < 1:657234/250‑1 (MQ=255) gcAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCAc > 1:65908/1‑190 (MQ=255) cGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAAc < 1:866530/251‑1 (MQ=255) cGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAAc < 1:836749/251‑1 (MQ=255) cGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATGTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAAc < 1:835128/251‑1 (MQ=255) ggggCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAAc > 1:575997/1‑250 (MQ=255) aTTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAAc < 1:268094/162‑1 (MQ=255) gCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACCGCGTtctc < 1:790307/241‑1 (MQ=255) tagtCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATTCCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACCGCGTTCTCCGCGCAATAAggc < 1:653001/250‑1 (MQ=255) tagtCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACCGCGTTCTCCGCGCAATAAggc < 1:728649/250‑1 (MQ=255) tagtCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACCGCGTTCTCCGCGCAATAAgg < 1:852040/249‑1 (MQ=255) agtCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGac < 1:426882/91‑1 (MQ=255) agtCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTc > 1:782381/1‑222 (MQ=255) agtCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAAc < 1:760309/227‑1 (MQ=255) gggCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATATAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATc < 1:410097/179‑1 (MQ=255) gggCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGaca‑a > 1:132857/1‑88 (MQ=255) gggCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAgg > 1:609766/1‑203 (MQ=255) gggCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACCGCGTTCTCCGCGCAATAAggcaatggca > 1:724236/1‑251 (MQ=255) gggCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACCGCGTTCTCCGCGCAATAAggcaatggca > 1:774600/1‑251 (MQ=255) gCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACCGCGTTCTCCGCGCAATAAggcaatggcaa < 1:316394/250‑1 (MQ=255) aCCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAaat < 1:498629/161‑1 (MQ=255) ccGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACCGCGTTCTCCGCGCAATAAGGCAATGGCAATtaat < 1:292717/251‑1 (MQ=255) ttGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTcc > 1:833767/1‑175 (MQ=255) ttGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAAc > 1:540885/1‑213 (MQ=255) ttGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACCGCGTTCTCCGCGCAATAAGGCAATGGCAATtaat > 1:186713/1‑248 (MQ=255) tGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACCGCGTTCTCCGCGCAATAAGGCAATGGCAATTAATAAtg < 1:643324/251‑1 (MQ=255) gCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAgg < 1:204952/192‑1 (MQ=255) ccTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACCGCGTTCTCCGCGCAATAAGGCAATGGCAATTAATAATGTGATtaa > 1:531054/1‑251 (MQ=255) cTTGTGCCCCACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACCGCGTTCTCCGCGCAATAAGGCAATGGCAATTAATAATGTGATtaat < 1:814531/251‑1 (MQ=255) cTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAgcgc < 1:606218/172‑1 (MQ=255) cTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACCGCGTTCTCCGCGCAATAAGGCAATGGCAATTAATAATGTGATtaat < 1:680437/251‑1 (MQ=255) gtgCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTaa > 1:232677/1‑142 (MQ=255) gtgCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTccc < 1:413026/164‑1 (MQ=255) tgCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACCGCGTTCTCCGCGCAATAAGGCAATGGCAATTAATAATGTGATTAATAAcg < 1:297730/251‑1 (MQ=255) gCCACACGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACCGCGTTCTCCGCGCAATAAGGCAATGGCAATTAATAATGTGATtaataa < 1:762866/248‑1 (MQ=255) acGCAATGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAgcg < 1:735883/161‑1 (MQ=255) aTGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAgg > 1:500913/1‑170 (MQ=255) aTGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAg > 1:509519/1‑169 (MQ=255) aTGCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACCGCGTTCTCCGCGCAATAAggc > 1:190113/1‑211 (MQ=255) gCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAaat > 1:88623/1‑131 (MQ=255) gCCATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACCGCGTTCTCCGCGCAATAAGGCAATGGCAATTAATAATGTGATTAATAACGCGATCGGGGtttt > 1:394982/1‑251 (MQ=255) ccATAGAAATAATAAAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATgg > 1:290550/1‑135 (MQ=255) taataaAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGc < 1:543235/49‑1 (MQ=255) taataaAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATgg > 1:773200/1‑126 (MQ=255) taataaAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAgcg < 1:835428/144‑1 (MQ=255) taataaAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAgg < 1:669571/158‑1 (MQ=255) taataaAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACCGCGTTCTCCGCGCAATAAGGCAATGGCAATTAATAATGTGATTAATAAcg > 1:174603/1‑228 (MQ=255) taataaAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACCGCGTTCTCCGCGCAATAAGGCAATGGCAATTAATAATGTGATTAATAACGCGATCGGGGTTTTGCCGATGAgg > 1:539705/1‑251 (MQ=255) taataaAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACCGCGTTCTCCGCGCAATAAGGCAATGGCAATTAATAATGTGATTAATAACGCGATCGGGGTTTTGCCGATGAgg > 1:41383/1‑251 (MQ=255) taataaAGGCGGCGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACCGCGTTCTCCGCGCAATAAGGCAATGGCAATTAATAATGTGATTAATAACGCGATCGGGGTTTTGCCGATGAgg > 1:363312/1‑251 (MQ=255) | CCAGGTTTTTAACGTGGTTTTGGTGTCCATTTCCAAGAAACGGCTTATTAACCAGAAACCGCTGTCGTTCACATGGGAGAATACGGTGGCGCCGGAGGCAATGGCAATCACGATAAAACATAAATCCAATTGGCTGAGATCGGTTGCGGCGGCAACGGTCGGGGCGATTAATGCGGCTGCAGTAGTCAGGGCTACCGTTGCCGAACCTTGTGCCACACGCAATGCCATAGAAATAATAAAGGCGGTGATGATGATCGGCATACCGGTATTTGACA‑ACATGGCGGATAACTCATCGCCGATGCCGCTGGCGCGCAATACGCCACCGAACATACCGCCCGCACCGGTCACTAAAATAATGGAGCAAATCGGTCCCAGCGCACTGTTACAAAGGCTTTCGATTTGTTCATAACTGCGTTCTCCGCGCAATAAGGCAATGGCAATTAATAATGTGATTAATAACGCGATCGGGGTTTTGCCGATGAGG > 1/1856591‑1857074 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |