| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,830,692 | A→G | intergenic (+35765/‑103639) | unknown → / → unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,830,692 | 0 | A | G | 98.5% | 180.1 / ‑5.0 | 67 | intergenic (+35765/‑103639) | unknown/unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (36/30); total (36/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
CTTGCCTCGTTACAGGGCGAGGGCCAACAAGGCTCATTTCACCTTTAAAGACGTTCCATAACTGCGGCAGCTCATCAAGGCTGGTTTTACGCAAAATTTTGCCGATTGGCGTGATTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTACGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTAGCGAGCTTATTGGGGATCCGCAGCACAATGGTTTCAGAGCTAAAGAAATGCGAAATTTCCGCCCCATAAAGTGGGATGCCTT > 1/1830445‑1830930 | ctggCCTCGTTCCAGGGCGAGGGCAAACAAGGCTCATTTCACCTTTAAAGACGTTCCATAACTGCGGCAGCTCATCAAGGCTGGTTTTACGCAAAATTTTGCCGATTGGCGTGATTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCA‑CATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGAt < 1:117865/248‑1 (MQ=255) tCGTTACAGGGCGAGGGCCAACAAGGCTCATTTCACCTTTAAAGACGTTCCATAACTGCGGCAGCTCATCAAGGCTGGTTTTACGCAAAATTTTGCCGATTGGCGTGATTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCg > 1:404444/1‑250 (MQ=255) ggCGAGGGCCAACAAGGCTCATTTCACCTTTAAAGACGTTCCATAACTGCGGCAGCTCATCAAGGCTGGTTTTACGCAAAATTTTGCCGATTGGCGTGATTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGa > 1:498880/1‑251 (MQ=255) ccAACAAGGCTCATTTCACCTTTAAAGACGTTCCATAACTGCGGCAGCTCATCAAGGCTGGTTTTACGCAAAATTTTGCCGATTGGCGTGATTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGc < 1:159312/250‑1 (MQ=255) caaGGCTCATTTCACCTTTAAAGACGTTCCATAACTGCGGCAGCTCATCAAGGCTGGTTTTACGCAAAATTTTGCCGATTGGCGTGATTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATac < 1:397348/251‑1 (MQ=255) gCTCATTTCACCTTTAAAGACGTTCCATAACTGCGGCAGCTCATCAAGGCTGGTTTTACGCAAAATTTTGCCGATTGGCGTGATTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATacac < 1:306811/249‑1 (MQ=255) cATTTCACCTTTAAAGACGTTCCATAACTGCGGCAGCTCATCAAGGCTGGTTTTACGCAAAATTTTGCCGATTGGCGTGATTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATacac < 1:240782/246‑1 (MQ=255) cATTTCACCTTTAAAGACGTTCCATAACTGCGGCAGCTCATCAAGGCTGGTTTTACGCAAAATTTTGCCGATTGGCGTGATTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCtt > 1:548825/1‑251 (MQ=255) aaGACGTTCCATAACTGCGGCAGCTCATCAAGGCTGGTTTTACGCAAAATTTTGCCGATTGGCGTGATTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCttt > 1:895802/1‑251 (MQ=255) ttCCATAACTGCGGCAGCTCATCAAGGCTGGTTTTACGCAAAATTTTGCCGATTGGCGTGATTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATacac > 1:705007/1‑227 (MQ=255) ttCCATAACTGCGGCAGCTCATCAAGGCTGGTTTTACGCAAAATTTTGCCGATTGGCGTGATTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATac > 1:246380/1‑225 (MQ=255) ttCCATAACTGCGGCAGCTCATCAAGGCTGGTTTTACGCAAAATTTTGCCGATTGGCGTGATTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGaa < 1:91653/250‑1 (MQ=255) ttCCATAACTGCGGCAGCTCATCAAGGCTGGTTTTACGCAAAATTTTGCCGATTGGCGTGATTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAat > 1:108772/1‑251 (MQ=255) ttCCATAACTGCGGCAGCTCATCAAGGCTGGTTTTACGCAAAATTTTGCCGATTGGCGTGATTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAat > 1:493916/1‑251 (MQ=255) ttCCATAACTGCGGCAGCTCATCAAGGCTGGTTTTACGCAAAATTTTGCCGATTGGCGTGATTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAat > 1:627223/1‑251 (MQ=255) aaCTGCGGCAGCTCATCAAGGCTGGTTTTACGCAAAATTTTGCCGATTGGCGTGATTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCaa > 1:470256/1‑251 (MQ=255) cTCATCAAGGCTGGTTTTACGCAAAATTTTGCCGATTGGCGTGATTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCAc < 1:692411/249‑1 (MQ=255) catcaAGGCTGGTTTTACGCAAAATTTTGCCGATTGGCGTGATTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCAc > 1:847264/1‑247 (MQ=255) tGCCGATTGGCGTGATTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCTCCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAAt < 1:9276/251‑1 (MQ=255) aTTGGCGTGATTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCt < 1:833466/251‑1 (MQ=255) aTTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATac > 1:204732/1‑165 (MQ=255) aTTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATac < 1:736686/165‑1 (MQ=255) aTTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAg < 1:473267/239‑1 (MQ=255) aTTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACca > 1:579414/1‑250 (MQ=255) aTTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACca > 1:620658/1‑250 (MQ=255) aTTCTAGGGCCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATcaac > 1:699491/1‑234 (MQ=255) tCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTAGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCTCCATCGTACGGAGTTTATAGCATTTGAAAACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACaa < 1:673786/251‑1 (MQ=255) ggTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCAGCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAatat < 1:820951/249‑1 (MQ=255) aTTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGc < 1:721783/149‑1 (MQ=255) tCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTa < 1:113381/251‑1 (MQ=255) tttAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTtc < 1:815553/250‑1 (MQ=255) ctTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATac < 1:709410/137‑1 (MQ=255) ctTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATcaacaa < 1:554585/208‑1 (MQ=255) ctTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACgg > 1:855106/1‑251 (MQ=255) ttATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACg < 1:612085/158‑1 (MQ=255) ttATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAg > 1:189791/1‑232 (MQ=255) ttATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGt > 1:468387/1‑251 (MQ=255) ttATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGt < 1:606371/251‑1 (MQ=255) ttATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGt > 1:248353/1‑251 (MQ=255) ccACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAAt > 1:320339/1‑166 (MQ=255) gCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACcac > 1:655734/1‑211 (MQ=255) gCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTa > 1:126862/1‑251 (MQ=255) ccTCATCTTTCGCCAGTAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTAGCGAGCTTATTg < 1:523986/251‑1 (MQ=255) tCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGc < 1:526430/168‑1 (MQ=255) tCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTAGCGAGCTTATTGGGGATCCgc < 1:327880/251‑1 (MQ=255) aatTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTAGCGAGCTTATTGGGGATCCGCAGCACAAt < 1:811423/251‑1 (MQ=255) aatTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAAGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTAGCGAGCTTATTGGGGATCCgc > 1:424896/1‑243 (MQ=255) aCGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTAGCGAGCTTATTGGGGATCCGCAGCACAATGGttt < 1:660573/251‑1 (MQ=255) aCGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTAGCGAGCTTATTGGGGATCCGCAGCACAATGGttt < 1:143608/251‑1 (MQ=255) cTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTAGCGAGCTTATTGGGGATCCGCAGCACAATGGTTTCAGAGCTa > 1:537851/1‑251 (MQ=255) gttgAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTAGCGAGCTTATTGGGGa > 1:162309/1‑222 (MQ=255) ttgAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTACGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTAGCGAGCTTATTGGGGATCCGCAGCACAATGGTTTCAGAGCTAAAg < 1:27103/250‑1 (MQ=255) ttAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTAGCGAGCTTATTGGGGATCCGCAGCACAAt > 1:847856/1‑227 (MQ=255) aaCCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTAc < 1:125676/170‑1 (MQ=255) aaCCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTAGCGAGCTTATTGGGGATCTGCAGCACAATGGTTTCAGAGCTAAAGAAATGCGaaa > 1:707330/1‑251 (MQ=255) gTACGGAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTAGCGAGCTTATTGGGGATCCGCAGCACAATGGTTTc > 1:349280/1‑221 (MQ=255) gAGTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTAGCGAGCTTATTGGGGATCCGCAGCACAATGGTTTCAGAGc < 1:420243/221‑1 (MQ=255) gTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGt > 1:29452/1‑169 (MQ=255) gTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTAGCGAGCTTATTGGGGATCCGCAGCACAATGGTTTCag > 1:612068/1‑216 (MQ=255) gTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTAGCGAGCTTATTGGGGATCCGCAGCACAATGGTTTCAGAGCTAAAGAAATGCGAAATTTCCGCCCCATAAAgg > 1:203210/1‑250 (MQ=255) gTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTAGCGAGCTTATTGGGGATCCGCAGCACAATGGTTTCAGAGCTAAAGAAATGCGAAATTTCCGCCCCATAAAgg > 1:895889/1‑250 (MQ=255) gTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTAGCGAGCTTATTGGGGATCCGCAGCACAATGGTTTCAGAGCTAAAGAAATGCGAAATTTCCGCCCCATAAAGt > 1:518574/1‑251 (MQ=255) gTTTATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTAGCGAGCTTATTGGGGATCCGCAGCACAATGGTTTCAGAGCTAAAGAAATGCGAAATTTCCGCCCCATAAAGt > 1:571014/1‑251 (MQ=255) gTTTATAGCATTTGAAGACTTTGCGATTTCGACCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACAAAGAAAAGCGGGGCAAGTAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATAAAAc > 1:550372/1‑165 (MQ=255) tttATAGCATTTGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTAGCGAGCTTATTGGGGATCCGCAGCACAATGGTTTCAGAGCTAAAGAAATGCGAAATTTCCGCCCCATAAAGt < 1:809631/250‑1 (MQ=255) tttGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTg < 1:201336/161‑1 (MQ=255) tttGAAGACTTTGCGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTAGCGAGCTTATTGGGGATCCGCAGCACAATGGTTTCAGAGCTAAAGAAATGCGAAATTTCCGCCCCATAAAGTGGGATGCCtt > 1:94789/1‑251 (MQ=255) | CTTGCCTCGTTACAGGGCGAGGGCCAACAAGGCTCATTTCACCTTTAAAGACGTTCCATAACTGCGGCAGCTCATCAAGGCTGGTTTTACGCAAAATTTTGCCGATTGGCGTGATTCTAGGGTCATTCTTGAGTTTAAACTCTTTATTCCACTGCTCGCGGGCTTCCTCATCTTTCGCCAATAATTCACGCAGCACTTGTTGAGAATTAACCACCATCGTACGGAGTTTATAGCATTTGAAGACTTTACGATTTCGCCCGACACGAACTTGGCTATACACTGCTTTTCCACCATCTTTACGAATCATCAAAAATAGCACCAAGAAAAGCGGGGCAAGCAGAATCAACAATAGGCTGGAAACCACAATATCAAAAGTACGTTTCATCAAACGGGTTGAGCGCTTAGCGAGCTTATTGGGGATCCGCAGCACAATGGTTTCAGAGCTAAAGAAATGCGAAATTTCCGCCCCATAAAGTGGGATGCCTT > 1/1830445‑1830930 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |