| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,824,704 | T→C | intergenic (+29777/‑109627) | unknown → / → unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,824,704 | 0 | T | C | 100.0% | 233.6 / NA | 83 | intergenic (+29777/‑109627) | unknown/unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (42/41); total (42/41) | |||||||||||
TCACCCAATGCACCAGCCACGCCATTAAAACGGAAATCAATAAATCTATCGGATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGTCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTCACCACCATCGAAAAAGCCATTACAGCAACAGCTAAAATCCATTGTTTACGATTAGAA > 1/1824460‑1824944 | tCACCCAATGCACCAGCCACGCCATTAAAACGGAAATCAATAAATCTATCGGATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTa > 1:626348/1‑251 (MQ=255) cccAATGCACCAGCCACGCCATTAAGACGGAAATCAATAAATCTATCGGATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATc < 1:594854/251‑1 (MQ=255) cccAATGCACCAGCCACGCCATTAAAACGGAAATCAATAAATCTATCGGATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAAt > 1:665655/1‑250 (MQ=255) ccaaaTGCACCAGCCACGCCATTAAAACGGAAATCAATAAATCTATCGGATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATc < 1:504993/248‑1 (MQ=255) aTGCACCAGCCACGCCATTAAAACGGAAATCAATAAATCTATCGGATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCAtt > 1:590599/1‑251 (MQ=255) gCACCAGCCACGCCATTAAAACGGAAATCAATAAATCTATCGGATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATcc < 1:802557/246‑1 (MQ=255) ccACGCCATTAAAACGGAAATCAATAAATCTATCGGATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCAc < 1:157594/249‑1 (MQ=255) ccACGCCATTAAAACGGAAATCAATAAATCTATCGGATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCAc < 1:402642/249‑1 (MQ=255) tCAATAAATCTATCGGATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAAt < 1:97020/251‑1 (MQ=255) tCAATAAATCTATCGGATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAAt < 1:797407/251‑1 (MQ=255) cAATAAATCTATCGGATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAAt > 1:361537/1‑250 (MQ=255) cTATCGGATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAAt < 1:488795/242‑1 (MQ=255) tATCGGATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGa < 1:861361/251‑1 (MQ=255) aTCGGATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAAt > 1:798307/1‑240 (MQ=255) aTCGGATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGAt > 1:410514/1‑251 (MQ=255) ggATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGGATCGGTCAACGATTTg > 1:484403/1‑251 (MQ=255) ggATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTg > 1:71075/1‑251 (MQ=255) ggATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTg > 1:52813/1‑251 (MQ=255) ggATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTg > 1:591837/1‑251 (MQ=255) gATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTg > 1:724871/1‑250 (MQ=255) gATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTg > 1:587530/1‑250 (MQ=255) aaTGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTgcgc > 1:395411/1‑250 (MQ=255) aTGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGAt > 1:505499/1‑227 (MQ=255) aTGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGcc > 1:192192/1‑250 (MQ=255) tGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCcg > 1:446421/1‑251 (MQ=255) ccGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCttt > 1:265999/1‑251 (MQ=255) cAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCt < 1:235159/250‑1 (MQ=255) gACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGAt > 1:47666/1‑239 (MQ=255) cATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATc > 1:719784/1‑169 (MQ=255) cATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAg < 1:208778/199‑1 (MQ=255) cATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGt > 1:194077/1‑251 (MQ=255) cATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGt > 1:210314/1‑251 (MQ=255) aTAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTg < 1:22719/251‑1 (MQ=255) cAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTc < 1:653868/194‑1 (MQ=255) cacaaaGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATc > 1:107911/4‑148 (MQ=255) cATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGtt > 1:109541/1‑251 (MQ=255) gTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGAt < 1:692544/181‑1 (MQ=255) ataatTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATgtaagta < 1:385128/251‑1 (MQ=255) cccTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGcc > 1:693077/1‑210 (MQ=255) cccTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCgg < 1:400322/218‑1 (MQ=255) cTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAg < 1:610977/149‑1 (MQ=255) cTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGtt > 1:220827/1‑218 (MQ=255) tttCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTc < 1:34849/251‑1 (MQ=255) cGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACa < 1:248039/251‑1 (MQ=255) gAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAg < 1:351844/185‑1 (MQ=255) gAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATgtaagta > 1:370700/1‑223 (MQ=255) gTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACAttt > 1:889463/1‑251 (MQ=255) acaAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAAcc < 1:792775/251‑1 (MQ=255) gCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGAtt > 1:230273/1‑251 (MQ=255) cGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAAt > 1:496424/1‑251 (MQ=255) cGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAAt < 1:394939/251‑1 (MQ=255) gTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATc > 1:583383/1‑250 (MQ=255) ttAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATccc < 1:33725/251‑1 (MQ=255) aCATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATcc > 1:547439/1‑247 (MQ=255) aCATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATcc > 1:445195/1‑247 (MQ=255) aTCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTAAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTgtgt < 1:79773/251‑1 (MQ=255) ccagcTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTcacca < 1:230908/251‑1 (MQ=255) ccagcTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTcacca < 1:11443/251‑1 (MQ=255) ccagcTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTcac < 1:264898/249‑1 (MQ=255) cTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTcaccac < 1:261844/248‑1 (MQ=255) gcggcgAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTCACCACCATCg < 1:102522/250‑1 (MQ=255) tGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATCTTTTAAACCGGATTTTAATCCCTGTGTCACCACCATCGAAAAAGCCAtt > 1:623152/1‑251 (MQ=255) gtCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTCACCACCATCGAAAAAGCCATTACAGCa > 1:113547/1‑251 (MQ=255) gtCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTCACCACCATCGAAAAAGCCATTACAGCa > 1:361230/1‑251 (MQ=255) gtCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACAAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTCACCACCATCGAAAAAGCCATTACAGCa > 1:440471/1‑251 (MQ=255) tCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTCACCACCATCGAAAAAGCCATTACAGCa > 1:736564/1‑250 (MQ=255) gaaggaaAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTCaccacc > 1:314596/1‑225 (MQ=255) ggaaAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATc > 1:505344/1‑208 (MQ=255) gaaAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAAc > 1:733921/1‑160 (MQ=255) gaaAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTcacca < 1:900676/219‑1 (MQ=255) gaaAAGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTCACCACCATCGAAAAAGCCATTACAGCAACAGCTaaa > 1:613421/1‑251 (MQ=255) aaGAATAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTCACCACCATCGAAAAAGCCATTACAGCAACAGCTAAAATc < 1:589594/251‑1 (MQ=255) aaTAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTCACCACCATCGAAAAAGCCATTACAGCAACAGCTAAAATcc < 1:728294/249‑1 (MQ=255) aaTAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTCACCACCATCGAAAAAGCCATTACAGCAACAGCTAAAATcc < 1:748190/249‑1 (MQ=255) tAGCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTCACCACCATCGAAAAAGCCATTACAGCAACAGCTAAAATCCATTg < 1:767200/251‑1 (MQ=255) gCCCACTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTCaccacc < 1:211052/211‑1 (MQ=255) cTTCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTCACCACCATCGAAAAAGCCATTACAGCAACAGCTAAAATCCATTGTTTACGa < 1:507531/251‑1 (MQ=255) ttCATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTCACCACCATCGAAAAAGCCATTACAGCAACAGCTAAAATCCATTGTTTACGAt < 1:637773/251‑1 (MQ=255) tgcATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGTTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTCACCACCATCGAAAAAGCCATTACAGCAACAGCTAAAATCCATTGTTTACGAt < 1:192076/249‑1 (MQ=255) cATCGGCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCaa > 1:271812/1‑162 (MQ=255) cGGCATAATGCTCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTCACCACCATCGAAAAAGCCATTACAGCAACAGCTAAAATCCATTGTTTACGATTAGaa < 1:775272/251‑1 (MQ=255) gCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGtt < 1:761946/42‑1 (MQ=255) gCATAATGCCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCt < 1:14293/84‑1 (MQ=255) | TCACCCAATGCACCAGCCACGCCATTAAAACGGAAATCAATAAATCTATCGGATAATGCATACCGAAACGCAGGCGACTGACCAACATCAATAGCGCCCAAATGCTCATAAAGCCAAGTAATAATTTCGCGTTCCCTTTTCTGTTGCCGAGTAATTGCACAAAGCCCACGGTTAACATCAGCCAGCTGGCGGCGAAAATGGTGTGTCCGGAAGGAAAAGAATAGCCCACTTCATCGGCATAATGTCCTTTAATCCATTCAGGCACCGAAGACTGGGTTTGATAGAATCGGTCAACGATTTGCGCCCGCGCTTTACGATCTTGCGCATAAAAAGCGTCGGTGCCTGTGCCGGTTTGTTCGGCGATGTAAGTAACGAAAGGGCGCGGTTCGGCAAATACATTTTTTAAACCGGATTTTAATCCCTGTGTCACCACCATCGAAAAAGCCATTACAGCAACAGCTAAAATCCATTGTTTACGATTAGAA > 1/1824460‑1824944 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |