Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,822,883 T→C intergenic (+27956/‑111448) unknown → / → unknown tRNA‑Leu‑CAA/tRNA‑Asp‑GTC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,822,8830TC100.0% 224.8 / NA 79intergenic (+27956/‑111448)unknown/unknowntRNA‑Leu‑CAA/tRNA‑Asp‑GTC
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (36/43);  total (36/43)

TTTCATTTCAGATAACGAACCACACGCCGATAACAGTAAAATTGATGAGCATAAGACCACCCTGGTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGTATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGACGGCTTATTCAAACTGCCTACCGATCAGTTTTCCGCCAAATTGAATCTCACCTTCGACACTGTGCCTTATTA  >  1/1822639‑1823129
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                      
tttcatttcaGATAACGAACCACACGCCGATAACAGTAAAATTGATGAGCATAAGACCACCCTGGTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTg                                                                                                                                                                                                                                                   >  1:791682/1‑250 (MQ=255)
          gATAACGAACCACACGCCGATAACAGTAAAATTGATGAGCATAAGACCACCCTGGTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGcc                                                                                                                                                                                                                                           <  1:122802/248‑1 (MQ=255)
                                 cAGTAAAATTGATGAGCATAAGACCACCCTGGTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAAtt                                                                                                                                                                                                                 >  1:205510/1‑251 (MQ=255)
                                    tAAAATTGATGAGCATAAGACCACCCTGGTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGc                                                                                                                                                                                                               <  1:155790/250‑1 (MQ=255)
                                               aGCATAAGACCACCCTGGTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGcac                                                                                                                                                                                                    <  1:896788/250‑1 (MQ=255)
                                                gCATAAGACCACCCTGGTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGTCATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACaa                                                                                                                                                                                                  >  1:559901/1‑251 (MQ=255)
                                                gCATAAGACCACCCTGGTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGccc                                                                                                                                                                                                                                                <  1:891949/205‑1 (MQ=255)
                                                gCATAAGACCACCCTGGTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGcc                                                                                                                                                                                                                                                 >  1:450775/1‑204 (MQ=255)
                                                gCATAAGACCACCCTGGTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAAt                                                                                                                                                                                                                          <  1:151573/227‑1 (MQ=255)
                                                gCATAAGACCACCCTGGTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATc                                                                                                                                                                                                                         <  1:276228/228‑1 (MQ=255)
                                                gCATAAGACCACCCTGGTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGcac                                                                                                                                                                                                    <  1:100058/249‑1 (MQ=255)
                                                gCATAAGACCACCCTGGTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACaa                                                                                                                                                                                                  >  1:770804/1‑251 (MQ=255)
                                                gCATAAGACCACCCTGGTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACaa                                                                                                                                                                                                  >  1:686143/1‑251 (MQ=255)
                                                gCATAAGACCACCCTGGTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACaa                                                                                                                                                                                                  >  1:330494/1‑251 (MQ=255)
                                                gCATAAGACCACCCTGGTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACaa                                                                                                                                                                                                  >  1:898590/1‑251 (MQ=255)
                                                   tAAGACCACCCTGGTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAAt                                                                                                                                                                                                                          >  1:70392/1‑224 (MQ=255)
                                                   tAAGACCACCCTGGTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACaataa                                                                                                                                                                                               <  1:873011/251‑1 (MQ=255)
                                                      gACCACCCTGGTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGc                                                                                                                                                                                                           >  1:619287/1‑236 (MQ=255)
                                                           cccTGGTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATaaaa                                                                                                                                                                                       >  1:877071/1‑251 (MQ=255)
                                                               ggTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCt                                                                                                                                                                                                          >  1:900973/1‑228 (MQ=255)
                                                                gTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACaataat                                                                                                                                                                                              <  1:718178/239‑1 (MQ=255)
                                                                gTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACaataa                                                                                                                                                                                               >  1:594095/1‑238 (MQ=255)
                                                                     atatTTCTGCATGAAAATAAGCTCCTTGAATTGATAAGAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATgg                                                                                                                                                                             <  1:30344/251‑1 (MQ=255)
                                                                     atatTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATgg                                                                                                                                                                             >  1:86212/1‑251 (MQ=255)
                                                                     atatTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATg                                                                                                                                                                              <  1:727888/250‑1 (MQ=255)
                                                                                          cTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGt                                                                                                                                                        <  1:333308/251‑1 (MQ=255)
                                                                                           tCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTc                                                                                                                                                                  <  1:522854/240‑1 (MQ=255)
                                                                                              ttGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGAt                                                                                                                                                    <  1:748949/251‑1 (MQ=255)
                                                                                                 aaTTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTAc                                                                                                                                                 <  1:497180/251‑1 (MQ=255)
                                                                                                 aaTTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTCACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTAc                                                                                                                                                 <  1:44909/251‑1 (MQ=255)
                                                                                                 aaTTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACAATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTACTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCATCCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTAc                                                                                                                                                 <  1:144135/251‑1 (MQ=255)
                                                                                                   ttGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAg                                                                                                                                               <  1:302122/251‑1 (MQ=255)
                                                                                                   ttGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAg                                                                                                                                               <  1:570470/251‑1 (MQ=255)
                                                                                                            gTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATg                                                                                                                                                                                                                              >  1:737225/1‑163 (MQ=255)
                                                                                                                     aGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTc                                                                                                                                                                  <  1:108383/214‑1 (MQ=255)
                                                                                                                      gTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATaaaaa                                                                                                                                                                                      >  1:568187/1‑193 (MQ=255)
                                                                                                                      gTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAg                                                                                                                                               <  1:607230/232‑1 (MQ=255)
                                                                                                                                          tttttAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGTTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCggg                                                                                                        <  1:453029/251‑1 (MQ=255)
                                                                                                                                          tttttAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCggg                                                                                                        >  1:675684/1‑251 (MQ=255)
                                                                                                                                                 aCCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACg                                                                                                  <  1:794853/250‑1 (MQ=255)
                                                                                                                                                  ccTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAg                                                                                                                                               <  1:747716/204‑1 (MQ=255)
                                                                                                                                                  ccTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACg                                                                                                  >  1:763731/1‑249 (MQ=255)
                                                                                                                                                       cGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGaa                                                                                           <  1:778828/251‑1 (MQ=255)
                                                                                                                                                        gATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATgg                                                                                                                                                                             >  1:280204/1‑168 (MQ=255)
                                                                                                                                                        gATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTc                                                                                                                                                                  <  1:678702/179‑1 (MQ=255)
                                                                                                                                                         aTTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAAt                                                                                          <  1:570171/250‑1 (MQ=255)
                                                                                                                                                             ggAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATgg                                                                                                                                                                             >  1:260467/1‑163 (MQ=255)
                                                                                                                                                             ggAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGcc                                                                                                                                                             >  1:249655/1‑179 (MQ=255)
                                                                                                                                                             ggAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGAttt                                                                                                                                   <  1:618820/205‑1 (MQ=255)
                                                                                                                                                             ggAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACACTCCGCGGGAAAACGCTTGGAATTGAg                                                                                      >  1:485142/1‑250 (MQ=255)
                                                                                                                                                             ggAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAg                                                                                      >  1:793714/1‑250 (MQ=255)
                                                                                                                                                              gagaATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACaataa                                                                                                                                                                                               >  1:282488/1‑144 (MQ=255)
                                                                                                                                                                  aTACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATcc                                                                                                             >  1:472700/1‑222 (MQ=255)
                                                                                                                                                                         tGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGa                                                                          >  1:420258/1‑250 (MQ=255)
                                                                                                                                                                         tGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGAc                                                                         <  1:339132/251‑1 (MQ=255)
                                                                                                                                                                         tGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGAGAAAACGCTTGGAATTGAGCGGCATTATCGa                                                                          >  1:536238/1‑250 (MQ=255)
                                                                                                                                                                                   gTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGACGGCTTATTc                                                                <  1:637573/250‑1 (MQ=255)
                                                                                                                                                                                       aaaCCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCa                                                                                                                                                                           <  1:856401/139‑1 (MQ=255)
                                                                                                                                                                                         aCCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGACGGCTTATTCAAACTg                                                          >  1:340080/1‑250 (MQ=255)
                                                                                                                                                                                                tttGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAGTCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGACGGCTTATTCAAACTGCCTACCGa                                                  <  1:321996/251‑1 (MQ=255)
                                                                                                                                                                                                      aCATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGACGGc                                                                      >  1:878129/1‑225 (MQ=255)
                                                                                                                                                                                                      aCATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGACGGCTTATTCAAACTGCCTACCGATCAGtt                                            >  1:739186/1‑251 (MQ=255)
                                                                                                                                                                                                           aCTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGcc                                                                                                                                                             <  1:848632/133‑1 (MQ=255)
                                                                                                                                                                                                                gtgCACTTTTGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGACGGCTTATTCAAACTGCCTACCGATCAGTTTTCCGCCaaa                                  >  1:72902/1‑251 (MQ=255)
                                                                                                                                                                                                                       tttGCTGACCTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGACGGCTTATTCAAACTGCCTACCGATCAGTTTTCCGCCAAATTGAAt                            >  1:768169/1‑250 (MQ=255)
                                                                                                                                                                                                                               ccTCAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGACGGCTTATTCAAACTGCCTACCGATCAGTTTTCCGCCAAATTGAATCTCACCtt                    >  1:838961/1‑250 (MQ=255)
                                                                                                                                                                                                                                  cAACATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGACGGCTTATTCAAACTGCCTACCGATCAGTTTTCCGCCAAATTGAATCTCACCTTCGac                <  1:150705/251‑1 (MQ=255)
                                                                                                                                                                                                                                    aCATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGACGGCTTATTCAAACTGCCTACCGATCAGTTTTCCGCCAAATTGAATCTCACCTTCGacac              <  1:468445/251‑1 (MQ=255)
                                                                                                                                                                                                                                    aCATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGACGGCTTATTCAAACTGCCTACCGATCAGTTTTCCGCCAAATTGAATCTCACCTTCGaca               >  1:840626/1‑250 (MQ=255)
                                                                                                                                                                                                                                     cATTATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATAACAGCCTGCACGATTTCAGTGCCAGAATCGGCCAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCTACGGCTTATTCAAACTGCCTACCGATCAGTTTTCCGCCAAATTGAATCTCACCTTCGaca               >  1:809726/1‑249 (MQ=255)
                                                                                                                                                                                                                                       ttATCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATgg                                                                                                                                                                             <  1:880043/89‑1 (MQ=255)
                                                                                                                                                                                                                                         aTCAACATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGACGGCTTATTCAAACTGCCTACCGATCAGTTTTCCGCCAAATTGAATCTCACCTTCGacac              >  1:228219/1‑246 (MQ=255)
                                                                                                                                                                                                                                            aaCATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGACGGCTTATTCAAACTGCCTACCGATCAGTTTTCCGCCAAATTGAATCTCACCTTCGACACTGTGCCtt      <  1:286967/251‑1 (MQ=255)
                                                                                                                                                                                                                                            aaCATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGACGGCTTATTCAAACTGCCTACCGATCAGTTTTCCGCCAAATTGAATCTCACCTTCGACACTGTGCCtt      <  1:621354/251‑1 (MQ=255)
                                                                                                                                                                                                                                              cATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGACGGCTTATTCAAACTGCCTACCGATCAGTTTTCCGCCAAATTGAATCTCACCTTCGACACTGTGCCttat    <  1:868749/251‑1 (MQ=255)
                                                                                                                                                                                                                                              cATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGACGGCTTATTCAAACTGCCTACCGATCAGTTTTCCGCCAAATTGAATCTCACCTTCGACACTGTGCCttat    <  1:28869/251‑1 (MQ=255)
                                                                                                                                                                                                                                              cATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGACGGCTTATTCAAACTGCCTACCGATCAGTTTTCCGCCAAATTGAATCTCACCTTCGACACTGTGCCttat    <  1:479641/251‑1 (MQ=255)
                                                                                                                                                                                                                                              cATCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGACGGCTTATTCAAACTGCCTACCGATCAGTTTTCCGCAAAATTGAATCTCACCTTCGACACTGTGCCttat    <  1:570890/251‑1 (MQ=255)
                                                                                                                                                                                                                                                tCCGCATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGACGGCTTATTCAAACTGCCTACCGATCAGTTTTCCGCCAAATTGAATCTCACCTTCGACACTGTGCCttatta  <  1:745245/251‑1 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                      
TTTCATTTCAGATAACGAACCACACGCCGATAACAGTAAAATTGATGAGCATAAGACCACCCTGGTGATATATTTCTGCATGAAAATAAGCTCCTTGAATTGATAAAAGTGCGGTCTAGTTTAACCGTTTTTTTATTTTTTTTAAACCTTACGATTAGGAGAATACCTATGTTTGCTTGGTTAAAACCAAAATTTGTGACATTACTTTGTGCACTTTTGCTGACCTCAACATTATCAACATCCGTATTTGCCCTTGCCATCGGCGAAAATGAAATCAACCAATTGCTGGCTCGGCACAATAATTATAAAAATAATTATGGCATCCCCGGTCTTGCCAGCGTGGATTACAGTCTGCACGATTTCAGTGCCAGAATCGGACAATCCGCGGGAAAACGCTTGGAATTGAGCGGCATTATCGACGGCTTATTCAAACTGCCTACCGATCAGTTTTCCGCCAAATTGAATCTCACCTTCGACACTGTGCCTTATTA  >  1/1822639‑1823129

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑