Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,815,588 T→C intergenic (+20661/‑118743) unknown → / → unknown tRNA‑Leu‑CAA/tRNA‑Asp‑GTC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,815,5880TC100.0% 223.8 / NA 80intergenic (+20661/‑118743)unknown/unknowntRNA‑Leu‑CAA/tRNA‑Asp‑GTC
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (47/33);  total (47/33)

GCTCCGGCCCTGCCGGCTATACTGCTGCGATTTATGCGGCACGCGCTAATTTGAAACCGTTATTAGTAACCGGTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTTAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTGATCGGCGGTGGCAATACGGCGGTCGAAGAAGCTTTGTATTTAGCCAATATTGCCAGCGAAGTGCATTTGAT  >  1/1815341‑1815827
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                               
gCTCCGGCCCTGCCGGCTATACTGCTGCGATTTATGCGGCACGCGCTAATTTGAAACCGTTATTAGTAACCGGTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCaaa                                                                                                                                                                                                                                              >  1:647850/1‑251 (MQ=255)
        ccTGCCGGCTATACTGCTGCGATTTATGCGGCACGCGCTAATTTGAAACCGTTATTAGTAACCGGTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACgg                                                                                                                                                                                                                                      <  1:584435/251‑1 (MQ=255)
                      tgctgcGATTTATGCGGCACGCGCTAATTTGAAACCGTTATTAGTAACCGGTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCt                                                                                                                                                                                                                        <  1:584305/251‑1 (MQ=255)
                             aTTTATGCGGCACGCGCTAATTTGAAACCGTTATTAGTAACCGGTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAg                                                                                                                                                                                                                    >  1:80025/1‑248 (MQ=255)
                                  tGCGGCACGCGCTAATTTGAAACCGTTATTAGTAACCGGTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATg                                                                                                                                                                                                            <  1:201325/251‑1 (MQ=255)
                                           cgcTAATTTGAAACCGTTATTAGTAACCGGTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAAtt                                                                                                                                                                                                    <  1:760931/250‑1 (MQ=255)
                                           cgcTAATTTGAAACCGTTATTAGTAACCGGTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTa                                                                                                                                                                                                   >  1:62671/1‑251 (MQ=255)
                                               aaTTTGAAACCGTTATTAGTAACCGGTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGc                                                                                                                                                                                               <  1:301580/251‑1 (MQ=255)
                                                 tttGAAACCGTTATTAGTAACCGGTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCa                                                                                                                                                                                             >  1:717578/1‑251 (MQ=255)
                                                       aCCGTTATTAGTAACCGGTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTg                                                                                                                                                                                       >  1:692210/1‑251 (MQ=255)
                                                        ccGTTATTAGTAACCGGTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGt                                                                                                                                                                                                                                     <  1:739611/204‑1 (MQ=255)
                                                        ccGTTATTAGTAACCGGTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTg                                                                                                                                                                                       >  1:727159/1‑250 (MQ=255)
                                                        ccGTTATTAGTAACCGGTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTg                                                                                                                                                                                       >  1:687717/1‑250 (MQ=255)
                                                         cGTTATTAGTAACCGGTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAAt                                                                                                                                                                                                                                             >  1:594198/1‑195 (MQ=255)
                                                         cGTTATTAGTAACCGGTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGc                                                                                                                                                                                      >  1:586535/1‑250 (MQ=255)
                                                         cGTTATTAGTAACCGGTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGc                                                                                                                                                                                      >  1:577817/1‑250 (MQ=255)
                                                              ttaGTAACCGGTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTccg                                                                                                                                                                                 >  1:588053/1‑250 (MQ=255)
                                                                     ccGGTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTAt                                                                                                                                                                         >  1:587423/1‑251 (MQ=255)
                                                                        gTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGc                                                                                                                                                                                                                   <  1:731203/206‑1 (MQ=255)
                                                                        gTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGa                                                                                                                                                                                                              >  1:689256/1‑211 (MQ=255)
                                                                        gTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTg                                                                                                                                                                      >  1:626783/1‑251 (MQ=255)
                                                                        gTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAACTATCGCCACCGGTGCCTCCGCCCGCTATTTg                                                                                                                                                                      >  1:818883/1‑251 (MQ=255)
                                                                            acaacaAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGc                                                                                                                                                                                                                   <  1:403494/202‑1 (MQ=255)
                                                                             caacaaGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGAtt                                                                                                                                                                 >  1:658864/1‑251 (MQ=255)
                                                                             caacaaGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGAtt                                                                                                                                                                 >  1:591597/1‑251 (MQ=255)
                                                                                       gTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCgaa                                                                                                                                                       >  1:121845/1‑251 (MQ=255)
                                                                                         cAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCgaaga                                                                                                                                                     >  1:826104/1‑251 (MQ=255)
                                                                                           actaactaCCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGAAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACgg                                                                                                                                                                                                                                      >  1:526442/1‑168 (MQ=255)
                                                                                              aactaCCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTgg                                                                                                                                                                     <  1:247674/230‑1 (MQ=255)
                                                                                               actaCCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTAACGACCGATGAAAGCTa                                                                                                                                               >  1:487207/1‑251 (MQ=255)
                                                                                                            aaaTTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTgg                                                                                                                                   <  1:478025/250‑1 (MQ=255)
                                                                                                              aTTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGa                                                                                                                                                                                                                                   <  1:742936/152‑1 (MQ=255)
                                                                                                              aTTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGt                                                                                                                                >  1:270077/1‑251 (MQ=255)
                                                                                                                                    tCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGAc                                                                                                          <  1:99629/251‑1 (MQ=255)
                                                                                                                                    tCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGAc                                                                                                          <  1:307531/251‑1 (MQ=255)
                                                                                                                                         gAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGAtt                                                                                                     >  1:290904/1‑251 (MQ=255)
                                                                                                                                           aaCTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATAc                                                                                                                                                                                                                                        >  1:91871/1‑118 (MQ=255)
                                                                                                                                              tACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCtttt                                                                                                <  1:649483/251‑1 (MQ=255)
                                                                                                                                                   gTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCg                                                                                            >  1:694833/1‑250 (MQ=255)
                                                                                                                                                             gATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCtg                                                                                                              <  1:147214/222‑1 (MQ=255)
                                                                                                                                                             gATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGAc                                                                                                          <  1:639315/226‑1 (MQ=255)
                                                                                                                                                             gATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGcc                                                                                   >  1:173803/1‑249 (MQ=255)
                                                                                                                                                             gATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGc                                                                                    >  1:862627/1‑248 (MQ=255)
                                                                                                                                                                 cAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGc                                                                             <  1:67019/251‑1 (MQ=255)
                                                                                                                                                                     gAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTg                                                                         >  1:645295/1‑251 (MQ=255)
                                                                                                                                                                      aaTGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTGa                                                                        <  1:415140/251‑1 (MQ=255)
                                                                                                                                                                      aaTGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTCTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCGGTg                                                                         <  1:217508/250‑1 (MQ=255)
                                                                                                                                                                       aTGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATAc                                                                                                                                                                                                                                        <  1:551288/90‑1 (MQ=255)
                                                                                                                                                                       aTGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCtg                                                                                                                                                                                                                 <  1:93802/113‑1 (MQ=255)
                                                                                                                                                                       aTGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACaa                                                                                                                                            >  1:586557/1‑182 (MQ=255)
                                                                                                                                                                       aTGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTGAt                                                                       >  1:20178/1‑251 (MQ=255)
                                                                                                                                                                                      gAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAgg                                                                                                                                         <  1:15069/170‑1 (MQ=255)
                                                                                                                                                                                      gAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTGATCGGCGGTGGCAATa                                                         >  1:683414/1‑250 (MQ=255)
                                                                                                                                                                                                   cGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTGATCGGCGGTGGCAATACGGCGGTCgaagaa                                           >  1:11186/1‑251 (MQ=255)
                                                                                                                                                                                                     gAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTGATCGGCGGTGGCAATACGGCGGGCgaaaaaag                                         >  1:270836/1‑246 (MQ=255)
                                                                                                                                                                                                       aaTTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTGATCGGCGGTGGCAATACGGCGGTCGAAGAAGCtt                                       <  1:154547/251‑1 (MQ=255)
                                                                                                                                                                                                           gTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAg                                                                           <  1:663322/211‑1 (MQ=255)
                                                                                                                                                                                                           gTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTGATCGGCGGTGGCAATACGGCGGTCGAAGAAGGtttttt                                   >  1:60054/1‑248 (MQ=255)
                                                                                                                                                                                                            tCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTGATCGGCGGTGGCAATACGGCGGTCGAAGAAGCTTTGTAt                                  <  1:286865/251‑1 (MQ=255)
                                                                                                                                                                                                             cTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGcc                                                                                   >  1:416775/1‑201 (MQ=255)
                                                                                                                                                                                                              ttCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTGATCGGCGGTGGCAATACGGCGGTCGAAGAAGCTTTGTAttt                                <  1:716766/251‑1 (MQ=255)
                                                                                                                                                                                                                  aTCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGcc                                                                                   <  1:224258/196‑1 (MQ=255)
                                                                                                                                                                                                                  aTCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTGATCGGCGGTGGCAATACGGCGGTCGAAGAAGCTTTTTTTTTAGc                             >  1:71776/1‑250 (MQ=255)
                                                                                                                                                                                                                    cATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTGATCGGCGGTGGCAATAcgg                                                      >  1:298907/1‑223 (MQ=255)
                                                                                                                                                                                                                    cATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTGATCGGCGGTGGCAATACGGCGGTCCGAGAAGccttttttttttccaa                          >  1:40147/1‑236 (MQ=255)
                                                                                                                                                                                                                    cATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTGATCGGCGGTGGCAATACGGCGGGCGGAGAAACTTTGTATTTTGccca                          >  1:653534/1‑249 (MQ=255)
                                                                                                                                                                                                                    cATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTGATCGGCGGTGGCAATACGGCGGGCGAAGAAGCTTTTTTTTTTGCCaa                          >  1:354196/1‑251 (MQ=255)
                                                                                                                                                                                                                    cATATTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTGATCGGCGGTGGCAATACGGCCGTCGAAAAAACCTTGTATTTTGccca                          >  1:787139/1‑249 (MQ=255)
                                                                                                                                                                                                                     atatTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGcc                                                                                   <  1:570114/193‑1 (MQ=255)
                                                                                                                                                                                                                     atatTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGcc                                                                                   >  1:119375/1‑193 (MQ=255)
                                                                                                                                                                                                                      tatTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTg                                                                         <  1:896733/202‑1 (MQ=255)
                                                                                                                                                                                                                      tatTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTGATCGGCGGTGGCAATACGGCGGTCGAAGAAACTTTTTAtttttgcaaaa                        >  1:868370/1‑243 (MQ=255)
                                                                                                                                                                                                                       atTAACCGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTGATCGGCGGTGGCAATACGGCGGTCGAAGAAGCTTTGTATTTAGCCAatat                       <  1:879085/251‑1 (MQ=255)
                                                                                                                                                                                                                            ccGTGTTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACaa                                                                                                                                            <  1:238787/129‑1 (MQ=255)
                                                                                                                                                                                                                              gtgtTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTg                                                                         >  1:824590/1‑194 (MQ=255)
                                                                                                                                                                                                                              gtgtTGATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTGa                                                                        <  1:227582/195‑1 (MQ=255)
                                                                                                                                                                                                                                   gATCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGAt                                                                                                                                                                  >  1:397431/1‑100 (MQ=255)
                                                                                                                                                                                                                                     tCTTTCCTCCCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTGATCGGCGGTGGCAATACGGCGGGCGGAGAAGCTTTTTATTTAGCCAATATTTCCCGCGAAgggg         >  1:749313/1‑248 (MQ=255)
                                                                                                                                                                                                                                          cctccCGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCtt                                                                                                  >  1:634157/1‑157 (MQ=255)
                                                                                                                                                                                                                                            ccccGCCCATTCAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTGATCGGCGGTGGCAATACGGCGGTCGAAGAAGCTTTGTATTTAGCCAATATTGCCAGCGAAGTGCATTTGAt  <  1:654436/250‑1 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                               
GCTCCGGCCCTGCCGGCTATACTGCTGCGATTTATGCGGCACGCGCTAATTTGAAACCGTTATTAGTAACCGGTTTACAACAAGGCGGTCAACTAACTACCACCAATGAAATTGAAAACTGGCCGGGCGATTTCGGTGAAACTACCGGTCCGGAACTGATGCAAAGAATGCTACAACACGCAGAAAAATTCGAGACGGAAATTGTCTTCGATCATATTAACCGTGTTGATCTTTCCTCCCGCCCATTTAAATTATACGGTGATGCTCAAACCTTTAGCTGTGATGCGTTAATTATCGCCACCGGTGCCTCCGCCCGCTATTTGGGATTACCGACCGAAGAAAGCTACAAAGGTCGTGGCGTTTCTGCCTGTGCCACCTGTGACGGATTCTTTTATCGCAATAAGCCTGTTGCAGTGATCGGCGGTGGCAATACGGCGGTCGAAGAAGCTTTGTATTTAGCCAATATTGCCAGCGAAGTGCATTTGAT  >  1/1815341‑1815827

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑