| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,794,614 | T→C | intergenic (+74656/‑228) | unknown → / → unknown | tRNA‑Asn‑GTT/tRNA‑Leu‑CAA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,794,614 | 0 | T | C | 100.0% | 85.2 / NA | 32 | intergenic (+74656/‑228) | unknown/unknown | tRNA‑Asn‑GTT/tRNA‑Leu‑CAA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (15/17); total (15/17) | |||||||||||
CTGACCGGCACGAACAACAGTGCCATATAACGAACCAGAAAATTAGAGAAAAACATCACCCATTCGATTTTGATAATGCGCGTAATTAAGCACGTAAAGAGCAACAATAATCCCCAAATACTGGAGGGAATGCCAATGGGAACAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAATTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCCACTACACTAGTAGAAAAGAAAGTAAGGGAAAAATTTCACATAGATCAAAATTATTGAATGTGTTGAATTTTAAACAGTTAAACAAAATTGCAAAGTTTTTGCTTGCAACTGAAACATAATCCCTTATAATACCGCTCGTTTTTACGAAGCTTATCAA > 1/1794374‑1794837 | cTGACCGGCACGAACAACAGTGCCATATAACGAACCAGAAAATTAGAGAAAAACATCACCCATTCGATTTTGATAATGCGCGTAATTAAGCACGTAAAGAGCAACAATAATCCCCAAATACTGGAGGGAATGCCAATGGGAACAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTaa < 1:138880/251‑1 (MQ=255) cGAACAACAGTGCCATATAACGAACCAGAAAATTAGAGAAAAACATCACCCATTCGATTTTGATAATGCGCGTAATTAAGCACGTAAAGAGCAACAATAATCCCCAAATACTGGAGGGAATGCCAATGGGAACAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAaat < 1:834113/251‑1 (MQ=255) atatAACGAACCAGAAAATTAGAGAAAAACATCACCCATTCGATTTTGATAATGCGCGTAATTAAGCACGTAAAGAGCAACAATAATCCCCAAATACTGGAGGGAATGCCAATGGGAACAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTActc > 1:394773/1‑247 (MQ=255) aCCAGAAAATTAGAGAAAAACATCACCCATTCGATTTTGATAATGCGCGTAATTAAGCACGTAAAGAGCAACAATAATCCCCAAATACTGGAGGGAATGCCAATGGGAACAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACaaga < 1:597744/251‑1 (MQ=255) aCATCACCCATTCGATTTTGATAATGCGCGTAATTAAGCACGTAAAGAGCAACAATAATCCCCAAATACTGGAGGGAATGCCAATGGGAACAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTActc > 1:458134/1‑219 (MQ=255) tCGATTTTGATAATGCGCGTAATTAAGCACGTAAAGAGCAACAATAATCCCCAAATACTGGAGGGAATGCCAATGGGAACAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCcactacac < 1:442117/251‑1 (MQ=255) cGATTTTGATAATGCGCGTAATTAAGCACGTAAAGAGCAACAATAATCCCCAAATACTGGAGGGAATGCCAATGGGAACAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCcactacact < 1:424575/251‑1 (MQ=255) ttGATAATGCGCGTAATTAAGCACGTAAAGAGCAACAATAATCCCCAAATACTGGAGGGAATGCCAATGGGAACAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCCACTACACtagtag > 1:496218/1‑251 (MQ=255) tAATTAAGCACGTAAAGAGCAACAATAATCCCCAAATACTGGAGGGAATGCCAATGGGAACAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCcactacac < 1:567867/232‑1 (MQ=255) tAATTAAGCACGTAAAGAGCAACAATAATCCCCAAATACTGGAGGGAATGCCAATGGGAACAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCCACTACACTAGTAGAAAAGAAAGTAAg < 1:169840/251‑1 (MQ=255) tAATTAAGCACGTAAAGAGCAACAATAATCCCCAAATACTGGAGGGAATGCCAATGGGAACAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCCACTACACTAGTAGAAAAGAAAGTAAg > 1:42143/1‑251 (MQ=255) cGTAAAGAGCAACAATAATCCCCAAATACTGGAGGGAATGCCAATGGGAACAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAaat > 1:401961/1‑169 (MQ=255) cGTAAAGAGCAACAATAATCCCCAAATACTGGAGGGAATGCCAATGGGAACAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCCACTACACTAGTAGAAAAGAAAGTAAGGGAAAAAttt > 1:53378/1‑251 (MQ=255) gagCAACAATAATCCCCAAATACTGGAGGGAATGCCAATGGGAACAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTAttt > 1:738874/1‑179 (MQ=255) gagCAACAATAATCCCCAAATACTGGAGGGAATGCCAATGGGAACAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCCACTACACTAGTagaaa < 1:103544/225‑1 (MQ=255) caacaaTAATCCCCAAATACTGGAGGGAATGCCAATGGGAACAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCCACTACACTAGTAGAAAAGAAAGTAAGGGAAAAATTTCACATAGAt > 1:429729/1‑251 (MQ=255) aaaTACTGGAGGGAATGCCAATGGGAACAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCCACTACACTAGTAGAAAAGAAAGTAAGGGAAAAATTTCACATAGATCAAAATTATTg > 1:541583/1‑248 (MQ=255) gAATGCCAATGGGAACAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTc < 1:875730/139‑1 (MQ=255) tGCCAATGGGAACAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCCACTACACTAGTAGAAAAGAAAGTAAGGGAAAAATTTCACAt > 1:712280/1‑218 (MQ=255) ggAACAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTc > 1:823392/1‑128 (MQ=255) cAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCCACTACACTAGTAGAAAAGAAAGTAAGGGAAAAATTTCACAt > 1:424324/1‑206 (MQ=255) ccgcccAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCCACTACACTAGTAGAAAAGAAAGTAAGGGAAAAATTTCACATAGATCAAAATTATTGAATGTGTTGAATTTTAAACAGTTAAACAAAATTGCAAAGTTTttgct < 1:73320/251‑1 (MQ=255) cgcccAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTActc < 1:816708/111‑1 (MQ=255) cccAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTAttt < 1:883063/115‑1 (MQ=255) cccAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCCACTACACTAGTAGAAAAGAAAGTAAGGGAAAAATTTCACATAGATCAAAATTATTGAATGTGTTGAATTTTAAACAGTTAAACAAAATTGCAAAGTTTttgcttg > 1:503676/1‑250 (MQ=255) aaaTATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCCACTACACTAGTAGAAAAGAAAGTAAGGGAAAAATTTCACATAGATCAAAATTATTGAATGTGTTGAATTTTAAACAGTTAAACAAAATTGCAAAGTTTTTGCTTGCAACTGAAACATAAt > 1:256779/1‑250 (MQ=255) gAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCCACTACACTAGTAGAAAAGAAAGTAAGGGAAAAATTTCACATAGATCAAAATTATTGAATGTGTTGAATTTTAAACAGTTAAACAAAATTGCAAAGTTTttgct > 1:301477/1‑222 (MQ=255) gAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCCACTACACTAGTAGAAAAGAAAGTAAGGGAAAAATTTCACATAGATCAAAATTATTGAATGTGTTGAATTTTAAACAGTTAAACAAAATTGCAAAGTTTTTGCTTGCAACTGAAACATAATCCCTTataat < 1:880347/249‑1 (MQ=255) aGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCCACTACACTAGTAGAAAAGAAAGTAAGGGAAAAATTTCACATAGATCAAAATTATTGAATGTGTTGAATTTTAAACAGTTAAACAAAATTGCAAAGTTTTTGCTTGCAACTGAAACATAATCCCTTATAATAc < 1:546687/250‑1 (MQ=255) aGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCCACTACACTAGTAGAAAAGAAAGTAAGGGAAAAATTTCACATAGATCAAAATTATTGAATGTGTTGAATTTTAAACAGTTAAACAAAATTGCAAAGTTTTTGCTTGCAACTGAAACATAATCCCTTATAATAc < 1:811780/250‑1 (MQ=255) aTCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCCACTACACTAGTAGAAAAGAAAGTAAGGGAAAAATTTCACATAGATCAAAATTATTGAATGTGTTGAATTTTAAACAGTTAAACAAAATTGCAAAGTTTTTGCTTGCAACTGAAACATAATCCCTTATAATAc < 1:847519/243‑1 (MQ=255) cATAGTGAAAACTCAACTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCCACTACACTAGTAGAAAAGAAAGTAAGGGAAAAATTTCACATAGATCAAAATTATTGAATGTGTTGAATTTTAAACAGTTAAACAAAATTGCAAAGTTTTTGCTTGCAACTGAAACATAATCCCTTATAATACCGCTCGTTCTTACGAAGCTTATCaa < 1:901771/240‑1 (MQ=255) | CTGACCGGCACGAACAACAGTGCCATATAACGAACCAGAAAATTAGAGAAAAACATCACCCATTCGATTTTGATAATGCGCGTAATTAAGCACGTAAAGAGCAACAATAATCCCCAAATACTGGAGGGAATGCCAATGGGAACAAAATGCGCGGTAAGCCCGCCCAAATACAGCATGAAATATAACAGGAGTAACGATCTTGCTAAGTCAAAAACTTTCCGATACATAGTGAAAACTCAATTTTTTTTTAATATTTAAAATAATTCTACTCTTATTTTACAAGAAGGGGAATTTTTTCCGGAAAGCCACTACACTAGTAGAAAAGAAAGTAAGGGAAAAATTTCACATAGATCAAAATTATTGAATGTGTTGAATTTTAAACAGTTAAACAAAATTGCAAAGTTTTTGCTTGCAACTGAAACATAATCCCTTATAATACCGCTCGTTTTTACGAAGCTTATCAA > 1/1794374‑1794837 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |