| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,774,929 | A→G | intergenic (+54971/‑19913) | unknown → / → unknown | tRNA‑Asn‑GTT/tRNA‑Leu‑CAA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,774,929 | 0 | A | G | 98.8% | 209.8 / NA | 81 | intergenic (+54971/‑19913) | unknown/unknown | tRNA‑Asn‑GTT/tRNA‑Leu‑CAA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (37/43); minor base C (1/0); total (38/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 | |||||||||||
CTTTCGCCTTTACCGGCTTCTTGGGTTATACCGTCGGACCGATTTTAAATGCGTATGTGAGTGCCGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCAGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAACTTATTTATCAGCTTGTTAAACTTACTTTCATTCTTCTCTTCCCGAGATTAATTATTAATTTAATAGATAAATGCAGCGCCCCTTTTTTGGGGCGTT > 1/1774691‑1775163 | cTTTCGCCTTTACCGGCTTCTTGGGTTATACCGTCGGACCGATTTTAAATGCGTATGTGAGTGCCGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGt < 1:886239/250‑1 (MQ=255) ttCGCCTTTACCGGCTTCTTGGGTTATACCGTCGGACCGATTTTAAATGCGTATGTGAGTGCCGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAgg < 1:609004/251‑1 (MQ=255) cGCCTTTACCGGCTTCTTGGGTTATACCGTCGGACCGATTTTAAATGCGTATGTGAGTGCCGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGGACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGGAGAAAGATATGTCTTTCTTGTCCGGCCCCCTTTTTGCCTTCTTCGTGGGGGTGTTACTTGGCATGATCGCCCGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTa > 1:432478/1‑251 (MQ=255) ccTTTACCGGCTTCTTGGGTTATACCGTCGGACCGATTTTAAATGCGTATGTGAGTGCCGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATc < 1:724604/251‑1 (MQ=255) tACCGGCTTCTTGGGTTATACCGTCGGACCGATTTTAAATGCGTATGTGAGTGCCGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTg < 1:235093/251‑1 (MQ=255) tACCGGCTTCTTGGGTTATACCGTCGGACCGATTTTAAATGCGTATGTGAGTGCCGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTg < 1:510392/251‑1 (MQ=255) tACCGGCTTCTTGGGTTATACCGTCGGACCGATTTTAAATGCGTATGTGAGTGCCGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCATTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTg < 1:566619/251‑1 (MQ=255) cttcttGGGTTATACCGTCGGACCGATTTTAAATGCGTATGTGAGTGCCGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCgctgt < 1:448815/251‑1 (MQ=255) ttcttGGGTTATACCGTCGGACCGATTTTAAATGCGTATGTGAGTGCCGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTTGCCTTTTTCGTGGTGTTGTTACTTGGCATGATTGCCAGTTTCTTCTTCCAATTTCCGGCGCTTTATGTAGGGATc > 1:452462/1‑240 (MQ=255) gggTTATACCGTCGGACCGATTTTAAATGCGTATGTGAGTGCCGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGGACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCCTTTTAGCCTTTTTCGTGGGGTTGTTACTTTGCATGATCGCCAGTTTTTTCTTCCCATTCCCCGCGCTTTTTGTAGGGATCAGTGCGTTGTTCGTgg > 1:470541/1‑250 (MQ=255) gggTTATACCGTCGGACCGATTTTAAATGCGTATGTGAGTGCCGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGGACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGa > 1:735304/1‑251 (MQ=255) ataCCGTCGGACCGATTTTAAATGCGTATGTGAGTGCCGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTTTGTAGGTATCAGTGCGTTGTTCGTGAttttt > 1:314117/1‑250 (MQ=255) tCGGACCGATTTTAAATGCGTATGTGAGTGCCGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTccac < 1:507578/250‑1 (MQ=255) aTTTTAAATGCGTATGTGAGTGCCGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGaa < 1:61418/250‑1 (MQ=255) ttttAAATGCGTATGTGAGTGCCGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTa < 1:468943/213‑1 (MQ=255) tttAAATGCGTATGTGAGTGCCGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGTACTGCGGCGACCTTCTTCGCATGTTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTc < 1:428703/251‑1 (MQ=255) tGCGTATGTGAGTGCCGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGTACTGCGGGGACCTTCTTTGCATGCTCTGCCTATGTTTTGACCACGAAAAAAGATATGTCTTTCTTTTTCGGCACCCTTTTTACCTTTTTTGTGGTGTTGTTACTTTGCATGATTGCCCGTTTTTTTTTTCAATTTCCGGCGCTTTTTGTAGGGATCAGTGCGTTGTTTGTGTTTTTCTCCACCATGGGGATTCTGTAtt > 1:858665/1‑250 (MQ=255) gTATGTGAGTGCCGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGGACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATg > 1:85022/1‑197 (MQ=255) tATGTGAGTGCCGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAAc < 1:635780/251‑1 (MQ=255) tgtgAGTGCCGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTc < 1:213654/239‑1 (MQ=255) ccGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAAcat < 1:643662/250‑1 (MQ=255) ccGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAAcat < 1:792686/250‑1 (MQ=255) gggTGATGCTATCGTGTTGGCATTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTccac < 1:109305/213‑1 (MQ=255) gCTATCGTGTTGGCATTGGCGGGGACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTTACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGGGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCCATTCCCGGCGCTTTTTGTAGGTATCAGTGCGTTGTTCGTGGTTTTCTCCACCATTGGAATTCTGTATGAAACCAGCAACATCATTCACGgcggcgg > 1:573329/1‑250 (MQ=255) tCGTGTTGGCATTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAAcc < 1:356384/251‑1 (MQ=255) cATTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATAtt < 1:655297/251‑1 (MQ=255) cATTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATAtt < 1:6753/251‑1 (MQ=255) aTTGGCGGGTACTGTGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTc < 1:628873/251‑1 (MQ=255) aTTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTc < 1:394233/251‑1 (MQ=255) ggCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGt > 1:589698/1‑156 (MQ=255) ggCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTg > 1:537361/1‑251 (MQ=255) gCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTg < 1:893252/250‑1 (MQ=255) gTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCcaca > 1:138793/1‑251 (MQ=255) tGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATgc > 1:318810/1‑146 (MQ=255) aCCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAAcat < 1:434691/203‑1 (MQ=255) ccTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTc < 1:693671/251‑1 (MQ=255) tcttcGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTg > 1:223689/1‑147 (MQ=255) cGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCAc < 1:246235/202‑1 (MQ=255) tGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCta > 1:831916/1‑251 (MQ=255) ctGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAAcc < 1:489130/179‑1 (MQ=255) gCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATggg < 1:338499/161‑1 (MQ=255) gCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTg < 1:112179/217‑1 (MQ=255) gCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAACtt > 1:803067/1‑251 (MQ=255) gCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAACtt > 1:184129/1‑251 (MQ=255) gCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGCATCAATCTATAACtt > 1:727604/1‑251 (MQ=255) ccTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTa > 1:48355/1‑126 (MQ=255) ccTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTg < 1:37180/132‑1 (MQ=255) aTGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAACtt > 1:62524/1‑247 (MQ=255) tGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAAc < 1:30944/171‑1 (MQ=255) tGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAAc > 1:826269/1‑244 (MQ=255) tGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAACttattta < 1:203315/251‑1 (MQ=255) gTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCg < 1:625808/229‑1 (MQ=255) gTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAAc > 1:328049/1‑243 (MQ=255) gTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAAc > 1:282244/1‑243 (MQ=255) tATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGTCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAACTTATTTATc < 1:423358/251‑1 (MQ=255) aaagaTATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAACTTATTTATCAGCTTGTTAAactt < 1:7363/251‑1 (MQ=255) aaagaTATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAACTTATTTATCAGCTTGTTAAactt < 1:776797/251‑1 (MQ=255) gaTATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGaa > 1:371169/1‑139 (MQ=255) gaTATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAACTTATTTATCAGCTTGTTAAactta > 1:722254/1‑249 (MQ=255) gaTATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAACTTATTTATCAGCTTGTTAAac < 1:873666/246‑1 (MQ=255) gTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCa > 1:818563/1‑152 (MQ=255) gTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATc < 1:193459/205‑1 (MQ=255) ccATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCCCGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAACTTATTTATCAGCTTGTTAAACTTACTTTCATTCTTCTCTTCCCGAGat < 1:147534/251‑1 (MQ=255) aTTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAACTTATTTATCAGCTTGTTAAACTTACTTTCATTCTTCTCTTCCCGAGatta > 1:245505/1‑251 (MQ=255) aTTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAACTTATTTATCAGCTTGTTAAACTTACTTTCATTCTTCTCTTCCCGAGatta > 1:286376/1‑251 (MQ=255) tATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAACTTATTTATCAGCTTGTTAAACTTACTTTCATTCTTCTCTTCCCGAGattaattattaatt < 1:131248/251‑1 (MQ=255) ttCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCg > 1:632260/1‑175 (MQ=255) gtgtTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTAtt > 1:646084/1‑167 (MQ=255) gtgtTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAAc > 1:351032/1‑183 (MQ=255) gtgtTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAAc > 1:158973/1‑183 (MQ=255) gtgtTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAACTTATTTATCAGCTTGTTAAACTTACTTTCATTCTTCTCTTCCCGAGATTAATTATTAATTTAATAGAt > 1:650699/1‑251 (MQ=255) tACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTc > 1:593621/1‑93 (MQ=255) tACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGtt > 1:442147/1‑156 (MQ=255) tACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAACttat < 1:151635/180‑1 (MQ=255) gATCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAACTTATTTATCAGCTTGTTAAACTTACTTTCATTCTTCTCTTCCCGAGATTAATTATTAATTTAATAGATAAATGCAGCGCCCCttt > 1:170566/1‑251 (MQ=255) aTCGCCAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTa < 1:640112/147‑1 (MQ=255) ccAGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAAc > 1:566422/1‑161 (MQ=255) aGTTTCTTCTTCCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAACTTATTTATCAGCTTGTTAAACTTACTTTCATtcttctc < 1:823657/197‑1 (MQ=255) tcttcttcCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAACTTATTTATCAGCTTGTTAAACTTACTTTCATTCTTCTCTTCCCGAGATTAATTATTAATTTAATAGATAAATGCAGCGCCCCTTTTTTGGGGCGtt > 1:409808/1‑251 (MQ=255) ttcCAATTCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAACTTATTTATCAGCTTGTTAAACTTACTTTCATTCTTCTCTTCCCGAGATTAATTATTAATTTAATAGATAAATGc > 1:378286/1‑224 (MQ=255) tCCCGGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAACTTATTTATCAGCTTGTTAAACTTACTTTCATTCTTCTCTTCCCGAGATTAATTATTAATTTAATAGATAAATGc < 1:501535/217‑1 (MQ=255) | CTTTCGCCTTTACCGGCTTCTTGGGTTATACCGTCGGACCGATTTTAAATGCGTATGTGAGTGCCGGTTTGGGTGATGCTATCGTGTTGGCATTGGCGGGTACTGCGGCGACCTTCTTCGCATGCTCTGCCTATGTATTGACCACGAAGAAAGATATGTCTTTCTTGTCCGGCACCATTTTAGCCTTATTCGTGGTGTTGTTACTTGGCATGATCGCCAGTTTCTTCTTCCAATTCCCAGCGCTTTATGTAGGTATCAGTGCGTTGTTCGTGATTTTCTCCACCATGGGAATTCTGTATGAAACCAGCAACATCATTCACGGCGGCGAAACCAACTATATTCGTGCCACAGTAAGTTTATTCGTATCAATCTATAACTTATTTATCAGCTTGTTAAACTTACTTTCATTCTTCTCTTCCCGAGATTAATTATTAATTTAATAGATAAATGCAGCGCCCCTTTTTTGGGGCGTT > 1/1774691‑1775163 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |