| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,767,907 | T→C | intergenic (+47949/‑26935) | unknown → / → unknown | tRNA‑Asn‑GTT/tRNA‑Leu‑CAA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,767,907 | 0 | T | C | 100.0% | 177.3 / NA | 67 | intergenic (+47949/‑26935) | unknown/unknown | tRNA‑Asn‑GTT/tRNA‑Leu‑CAA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (21/46); total (21/46) | |||||||||||
TGAAATGCAACGGTTGGGTTTTCCGCTCAAATAACGGCAAGCCGTATTGTTCTTCCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGGCTCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATACAGGATCATTAATTTCTTTCATAAACTTTTAGAAAATTATTAATTTGCATAATACCCCCGTTTTCGTCATTCTAGCCCACGTATAGACGTTTAGCCGTCTAAATCATTTAATACATTGAGGAATTAGTA > 1/1767663‑1768149 | tGAAATGCAACGGTTGGGTTTTCCGCTCAAATAACGGCAAGCCGTATTGTTCTTCCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCAc < 1:493396/250‑1 (MQ=255) tGCAACGGTTGGGTTTTCCGCTCAAATAACGGCAAGCCGTATTGTTCTTCCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAAc < 1:184109/251‑1 (MQ=255) cAACGGTTGGGTTTTCCGCTCAAATAACGGCAAGCCGTATTGTTCTTCCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACg < 1:862914/250‑1 (MQ=255) cAACGGTTGGGTTTTCCGCTCAAATAACGGCAAGCCGTATTGTTCTTCCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACg < 1:848615/250‑1 (MQ=255) cAACGGTTGGGTTTTCCGCTCAAATAACGGCAAGCCGTATTGTTCTTCCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGt < 1:103377/251‑1 (MQ=255) cAACGGTTGGGTTTTCCGCTCAAATAACGGCAAGCCGTATTGTTCTTCCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGt < 1:34336/251‑1 (MQ=255) gTTTTCCGCTCAAATAACGGCAAGCCGTATTGTTCTTCCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATagaag > 1:430906/1‑251 (MQ=255) ttttCCGCTCAAATAACGGCAAGCCGTATTGTTCTTCCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATagaag < 1:624411/250‑1 (MQ=255) ccGCTCAAATAACGGCAAGCCGTATTGTTCTTCCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGaaatc < 1:267077/251‑1 (MQ=255) ccGCTCAAATAACGGCAAGCCGTATTGTTCTTCCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGaaatc < 1:21844/251‑1 (MQ=255) aaTAACGGCAAGCCGTATTGTTCTTCCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGaaatccataaaa < 1:672565/251‑1 (MQ=255) tAACGGCAAGCCGTATTGTTCTTCCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGaaatccataaaatc < 1:524041/251‑1 (MQ=255) aaGCCGTATTGTTCTTCCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGaaatccataaaat < 1:102023/243‑1 (MQ=255) gCCGTATTGTTCTTCCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGt < 1:730326/218‑1 (MQ=255) gCCGTATTGTTCTTCCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGt < 1:239718/218‑1 (MQ=255) ccGTATTGTTCTTCCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGa < 1:164475/249‑1 (MQ=255) gTATTGTTCTTCCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAAt > 1:526389/1‑250 (MQ=255) tATTGTTCTTCCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATc < 1:554920/250‑1 (MQ=255) ttGTTCTTCCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGGTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGAt > 1:301955/1‑251 (MQ=255) ttGTTCTTCCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGCATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGAt > 1:444680/1‑251 (MQ=255) cttcCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGaaaa < 1:54943/251‑1 (MQ=255) aatttaatttGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAAt > 1:578243/1‑234 (MQ=255) tGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTGCCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATagaaga < 1:232919/201‑1 (MQ=255) tGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTaa > 1:735121/1‑251 (MQ=255) tGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTaa > 1:776286/1‑251 (MQ=255) tGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGCAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTaa > 1:616473/1‑251 (MQ=255) tGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAg < 1:91993/251‑1 (MQ=255) ggACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATagaag > 1:852743/1‑195 (MQ=255) ccGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTa < 1:72318/250‑1 (MQ=255) gATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACAt > 1:821554/1‑180 (MQ=255) gggTGAGATAAACCCGCTTTGCCGCTAAGGAAATGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGa < 1:441821/203‑1 (MQ=255) gggTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAAc > 1:102499/1‑169 (MQ=255) gTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTacc < 1:605681/250‑1 (MQ=255) gagaTAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTaccac > 1:98352/1‑250 (MQ=255) aTAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCg < 1:863252/249‑1 (MQ=255) cTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACtaataa < 1:615163/251‑1 (MQ=255) ttGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATaaaa < 1:467300/251‑1 (MQ=255) ccGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATAc < 1:204812/251‑1 (MQ=255) ccGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATAc < 1:225195/251‑1 (MQ=255) aaGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATAc < 1:656907/246‑1 (MQ=255) aaGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATACAGGAt < 1:126071/251‑1 (MQ=255) aaGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATACAGGAt < 1:106159/251‑1 (MQ=255) aGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGGAAACTAATAAAATACAGGAt > 1:61813/1‑250 (MQ=255) ggAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATCCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACAt < 1:204584/148‑1 (MQ=255) cGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATACAGGATCATTAAt < 1:41151/251‑1 (MQ=255) cTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATACAGGATCATTa < 1:116853/247‑1 (MQ=255) cTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATACAGGATCATTAAttt > 1:395334/1‑251 (MQ=255) cTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATACAGGATCATTAAttt < 1:803437/251‑1 (MQ=255) aCCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTaccac > 1:897681/1‑217 (MQ=255) tttcAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGt < 1:733467/125‑1 (MQ=255) cAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATACAGGATCATTAATTTCTTTCATAAACTTTTAGaa < 1:185010/251‑1 (MQ=255) aaGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGaaatccataaaat < 1:857305/139‑1 (MQ=255) gTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACAt > 1:676175/1‑114 (MQ=255) gTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGa > 1:623096/1‑141 (MQ=255) gTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAg > 1:575382/1‑163 (MQ=255) gTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAAt < 1:457728/198‑1 (MQ=255) gTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATACAGGATCATTAATTTCTTTCATAAACTTTTAGAAAATTATTAATTTGCataa > 1:509600/1‑251 (MQ=255) tGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATACAGGATCATTAATTTCTTTCATAAACTTTTAGAAAATTATTAATTTGCATAATAc < 1:75017/251‑1 (MQ=255) gTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATAc < 1:482807/194‑1 (MQ=255) cATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATACAGGATCATTAATTTCTTTCATAAACTTTTAGAAAATTATTAATTTGCATAATACCCCCGTTTTCGTCATTCTAGcc < 1:815456/251‑1 (MQ=255) cATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATACAGGATCATTAATTTCTTTCATAAACTTTTAGAAAATTATTAATTTGCATAATACCCCCGTTTTCGTCATTCTAGcc < 1:746489/251‑1 (MQ=255) aGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATACAGGATCATTAAttt > 1:111390/1‑181 (MQ=255) aaaTTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATACAGGATCATTAATTTCTTTCATAAACTTTTAGAAAATTATTAATTTGCATAATACCCCCGTTTTCGTCATTCTAGCCCACGTATAGACGTTTAGc < 1:837378/251‑1 (MQ=255) ccGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATACAGGATCATTAAttt > 1:602508/1‑151 (MQ=255) ccGTATCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATACAGGATCATTAATTTCTTTCATAAACTTTTAGAAAATTATTAATTTGCATAATACCCCCGTTTTCGTCATTCTAGCCCACGTATAGACGTTTAGCCGTCTAAATCATTTaacac < 1:290496/250‑4 (MQ=255) aTCATACACGAAAACGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATACAGGATCATTAATTTCTTTCATAAACTTTTAGAAAATTATTAATTTGCATAATACCCCCGTTTTCGTCATTCTAGCCCACGTATAGATGTTTAGCCGTCTAAATCATTTaac < 1:190254/244‑2 (MQ=255) aaaaCGACCCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATACAGGATCATTAATTTCTTTCATAAACTTTTAGAAAATTATTAATTTGCATAATACCCCCGTTTTCGTCATTCTAGCCCACGTATAGACGTTTAGCCGTCTAAATCATTTAACACATTGAGGAATTAGTa < 1:218830/251‑1 (MQ=255) | TGAAATGCAACGGTTGGGTTTTCCGCTCAAATAACGGCAAGCCGTATTGTTCTTCCAATAATTTAATTTGATGGGACAGCGCCGATTGGGTGAGATAAACCCGCTTTGCCGCTAAGGAAACGCTACCGGTTTCTTTCAGGGCAAGTAAAGTTTTGAGATGTCTGAGTTCAAGGAAGATCGGTTTCATGAGAAAGATTCATCTAAATTCGAAAAAGAATGAAGCCGTATCATACACGAAAACGGCTCGCACTTTAACGTTACATAGAAGAAATCCATAAAATCCATAAAGAAATCGATGAAAAAGTGCGGTCGTTTTTAAAAGCGTTTTTTATGATTACCACCGCAAACTAATAAAATACAGGATCATTAATTTCTTTCATAAACTTTTAGAAAATTATTAATTTGCATAATACCCCCGTTTTCGTCATTCTAGCCCACGTATAGACGTTTAGCCGTCTAAATCATTTAATACATTGAGGAATTAGTA > 1/1767663‑1768149 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |