| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,763,905 | C→T | intergenic (+43947/‑30937) | unknown → / → unknown | tRNA‑Asn‑GTT/tRNA‑Leu‑CAA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,763,905 | 0 | C | T | 98.7% | 186.1 / NA | 74 | intergenic (+43947/‑30937) | unknown/unknown | tRNA‑Asn‑GTT/tRNA‑Leu‑CAA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (45/28); minor base G (1/0); total (46/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AATGGTATAGACCGGATAATATGTCCCTTATTGTCGTCGGTGATATCGATGCGCACAAAATTGCACAGTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGCCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCAATTAATCGATACCAATTATTTAAAAAATATCACCGCACTTTTTGCTTTTATCGCCGAAATTAAACAACATGGATTTACCGCCGA > 1/1763662‑1764148 | aaTGGTATAGACCGGATAATATGTCCCTTATTGTCGTCGGTGATATCGATGCGCACAAAATTGCACAGTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGc < 1:535395/251‑1 (MQ=255) ggTATAGACCGGATAATATGTCCCTTATTGTCGTCGGTGATATCGATGCGCACAAAATTGCACAGTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTa > 1:562032/1‑250 (MQ=255) gTATAGACCGGATAATATGTCCCTTATTGTCGTCGGTGATATCGATGCGCACAAAATTGCACAGTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTaca > 1:207456/1‑251 (MQ=255) gTATAGACCGGATAATATGTCCCTTATTGTCGTCGGTGATATCGATGCGCACAAAATTGCACAGTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAAAAAGGCACCAATATCCCCGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAAAAAAAAGAAACGGGCATTGGCTaca > 1:869256/1‑251 (MQ=255) ggATAATATGTCCCTTATTGTCGTCGGTGATATCGATGCGCACAAAATTGCACAGTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGAt > 1:578753/1‑250 (MQ=255) ggATAATATGTCCCTTATTGTCGTCGGTGATATCGATGCGCACAAAATTGCACAGTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCACTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGAt > 1:55083/1‑250 (MQ=255) gATAATATGTCCCTTATTGTCGTCGGTGATATCGATGCGCACAAAATTGCACAGTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGAt > 1:21490/1‑249 (MQ=255) ataataTGTCCCTTATTGTCGTCGGTGATATCGATGCGCACAAAATTGCACAGTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGAtctc < 1:404389/251‑1 (MQ=255) ataataTGTCCCTTATTGTCGTCGGTGATATCGATGCGCACAAAATTGCACAGTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGAtctc < 1:397445/251‑1 (MQ=255) atatGTCCCTTATTGTCGTCGGTGATATCGATGCGCACAAAATTGCACAGTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGCGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCAtt > 1:645013/1‑251 (MQ=255) atatGTCCCTTATTGTCGTCGGTGATATCGATGCGCACAAAATTGCACAGTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCA‑TGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCAtt > 1:409515/1‑250 (MQ=255) cccTTATTGTCGTCGGTGATATCGATGCGCACAAAATTGCACAGTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCACTATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTcaacaa > 1:794937/1‑251 (MQ=255) ccTTATTGTCGTCGGTGATATCGATGCGCACAAAATTGCACAGTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACaaa > 1:258655/1‑251 (MQ=255) gtcgtcGGTGATATCGATGCGCACAAAATTGCACAGTTAATATCACAACAACTAGATAAACCGAGTCCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGa > 1:59857/1‑250 (MQ=255) gTGATATCGATGCGCACAAAATTGCACAGTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATtg < 1:237718/240‑1 (MQ=255) atatCGATGCGCACAAAATTGCACAGTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTc < 1:400206/251‑1 (MQ=255) atatCGATGCGCACAAAATTGCACAGTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTc < 1:879084/251‑1 (MQ=255) aaaTTGCACAGTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCCACAAATTATGACCCGTTTAGTCAATTTACGTCTGCaa > 1:536061/1‑251 (MQ=255) gTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCTAGTATTTCCGAACAAGGCACCAATATCCCGGCACTGGAGATGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGAtctc > 1:690303/1‑199 (MQ=255) gTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGaaa > 1:623317/1‑251 (MQ=255) gTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGaaa > 1:202907/1‑251 (MQ=255) gTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGaaa > 1:663803/1‑251 (MQ=255) gTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGaaa > 1:436943/1‑251 (MQ=255) tatCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGGAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTAAGTCTGCAAAAATGGGAAAAAAg > 1:320521/1‑250 (MQ=255) caacTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATTCCGGCACTGGAGTTTAGCTTTTTTGAAGAAGATAAACAAAAAAAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATTGGa > 1:679875/1‑236 (MQ=255) caacTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAg > 1:33895/1‑181 (MQ=255) caacTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGGCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAaacaa > 1:740278/1‑251 (MQ=255) caacTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCCTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAaacaa > 1:265758/1‑251 (MQ=255) tAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTacaaaca < 1:507002/175‑1 (MQ=255) cacaACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTacaaac < 1:266086/153‑1 (MQ=255) caACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCg > 1:283523/1‑251 (MQ=255) caACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCg > 1:777114/1‑251 (MQ=255) caACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCg < 1:45262/251‑1 (MQ=255) ttAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATc < 1:537159/250‑1 (MQ=255) ttAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCt < 1:279679/251‑1 (MQ=255) aGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTg > 1:681188/1‑251 (MQ=255) gATTTTAGCATTCCGCTGATTCATCATTGGCGGGGAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTaaacaaa > 1:759950/1‑250 (MQ=255) aTTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTaaacaaac < 1:667481/250‑1 (MQ=255) aTTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTaaacaaac < 1:788745/250‑1 (MQ=255) cATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCaa < 1:68483/250‑1 (MQ=255) cATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTCTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATTGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCaa < 1:439624/250‑1 (MQ=255) gATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCtttt > 1:712856/1‑251 (MQ=255) gATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCtttt > 1:474683/1‑251 (MQ=255) aTTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATTGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTc < 1:527346/251‑1 (MQ=255) ttCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGCAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTc > 1:8862/1‑250 (MQ=255) ttGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCAAt < 1:672762/251‑1 (MQ=255) ggTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCAATTAATc < 1:168419/250‑1 (MQ=255) ggTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCAATTAATc < 1:773880/250‑1 (MQ=255) gTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAGCTGGTTGGATTCGGCGAATTTCTATCg > 1:423296/1‑197 (MQ=255) tAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAAcc > 1:526313/1‑218 (MQ=255) tAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCAATTAATCGAt > 1:587078/1‑251 (MQ=255) gTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAaacaac > 1:407616/1‑164 (MQ=255) tATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCAATTAATCGATACCAatt < 1:173114/251‑1 (MQ=255) ccGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCAATTAATCGATACCAATTAttt < 1:559792/250‑1 (MQ=255) gAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTc > 1:350036/1‑221 (MQ=255) aCAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCAATTAATCGATACCAATTATTTaaaaa < 1:337325/251‑1 (MQ=255) aCCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCAATTAATCGATACCAATTATTTAAAAAATATCAc < 1:350516/251‑1 (MQ=255) ccAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAaacaac > 1:38567/1‑146 (MQ=255) ccAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCAATTAATc > 1:311321/1‑224 (MQ=255) ccAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCAATTAATCGATACCAATTATTTAAAAAATATCAc > 1:289432/1‑250 (MQ=255) ccAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCAATTAATCGATACCAATTATTTAAAAAATATCAc > 1:772115/1‑250 (MQ=255) tatCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCAATTAATCGATACCAATTATTTAAAAAATATCACCGCAc < 1:296448/251‑1 (MQ=255) gCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCaa > 1:723696/1‑189 (MQ=255) gCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCAATTAATCGATACCAATTATTTAAAAAATATCACCGCACTTTTTg > 1:572995/1‑250 (MQ=255) tttttGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCAATTAATc < 1:570439/197‑1 (MQ=255) tttttGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCAATTAATCGATACCAATTATTTAAAAAATATCACCGCACTTTTTGCTTTTATCGCCGAAAtt > 1:403888/1‑251 (MQ=255) tGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCAATTAATCGATACCAATTATTTAAAAAATATCACCGCACTTTTTGCTTTTATCGCCGAAATTAaac < 1:353431/251‑1 (MQ=255) tGAAGAAGATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCAATTAATCGATACCAATTATTTAAAAAATATCACCGCACTTTTTGCTTTTATCGCCGAAATTAaac < 1:738475/251‑1 (MQ=255) aagaagATAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCAATTAATCGATACCAATTATTTAAAAAATATCACCGCACTTTTTGCTTTTATCGCCGAAATTAaacaa < 1:39641/251‑1 (MQ=255) aagaTAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTaaacaa > 1:409091/1‑155 (MQ=255) gaTAAACAAAAAGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAAcc > 1:635543/1‑156 (MQ=255) aaaGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCCATTAATCGATACCAATTATTTAAAAAATATCACCGCACTTTTTGCtt > 1:427376/1‑217 (MQ=255) aaGAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCAATTAATCGATACCAATTATTTAAAAAATATCACCGCACTTTTTGCTTTTATCGCCGAAATTAAACAACATGGATTTAccgc > 1:670239/1‑250 (MQ=255) gAAACGGTCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAACACAACTGGCTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCAATTAATCGATACCAATTATTTAAAAAATATCACCGCACTTTTTGCTTTTATCGCCGAAATTAAACAACATGGATTTACCGCcga > 1:156458/1‑251 (MQ=255) | AATGGTATAGACCGGATAATATGTCCCTTATTGTCGTCGGTGATATCGATGCGCACAAAATTGCACAGTTAATATCACAACAACTAGATAAACCGAGTTCTCGCACACAACGCCCGTTAGATAAAATTGATTTTAGCATTCCGCTGATTCATCATTGGCGGGTAGCAAGTATTGCCGAACAAGGCACCAATATCCCGGCACTGGAGTTGAGCTTTTTTGAAGAAGATAAACAAAAAGAAACGGCCATTGGCTACAAACAAGATCTCATTCAACAAATTGTGACCCGTTTAGTCAATTTACGTCTGCAAAAATGGGAAAAAAGCCAAAACAACTGGTTGGATTCGGCGAATTTCTATCGTTCTCATCTTGGTAAACAAACCCTGCAAAGTGTCTTTTCCTTGCAATTAATCGATACCAATTATTTAAAAAATATCACCGCACTTTTTGCTTTTATCGCCGAAATTAAACAACATGGATTTACCGCCGA > 1/1763662‑1764148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |