| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,752,446 | C→T | intergenic (+32488/‑42396) | unknown → / → unknown | tRNA‑Asn‑GTT/tRNA‑Leu‑CAA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,752,446 | 0 | C | T | 98.7% | 185.9 / NA | 74 | intergenic (+32488/‑42396) | unknown/unknown | tRNA‑Asn‑GTT/tRNA‑Leu‑CAA |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (32/41); total (33/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.46e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATATTATTTAACCGAAGTGCAAGCACAAGCCATTTTAGATTTACGTTTGCAAAAATTAACCAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGCGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAAAGAAGAAGATTTTATCGAAAAATTACTGGTTGCCAACACCCACGATACCATTCTCTGCTTCTCCAGCCGCGGACGTTTATACTGGCTGAAAGTATATCAACT > 1/1752209‑1752688 | atatTATTTAACCGAAGTGCAAGCACAAGCCATTTTAGATTTACGTTTGCAAAAATTAACCAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTgg > 1:346318/1‑251 (MQ=255)atatTATTTAACCGAAGGGCAAGCACAAGCCATTTTAGATTTACGTTTGCAAAAATTAACCAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTgg > 1:384573/1‑251 (MQ=255) gTGCAAGCACAAGCCATTTTAGATTTACGTTTGCAAAAATTAACCAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCa > 1:119070/1‑251 (MQ=255) gTGCAAGCACAAGCCATTTTAGATTTACGTTTGCAAAAATTAACCAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCa > 1:657748/1‑251 (MQ=255) gTGCAAGCACAAGCCATTTTAGATTTACGTTTGCAAAAATTAACCAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCa > 1:368705/1‑251 (MQ=255) gTGCAAGCACAAGCCATTTTAGATTTACGTTTGCAAAAATTAACCAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCa > 1:360679/1‑251 (MQ=255) aaGCACAAGCCATTTTAGATTTACGTTTGCAAAAATTAACCAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCaagaa < 1:128578/251‑1 (MQ=255) gCACAAGCCATTTTAGATTTACGTTTGCAAAAATTAACCAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAagaaga > 1:696425/1‑251 (MQ=255) ccATTTTAGATTTACGTTTGCAAAAATTAACCAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATgtgg < 1:752976/249‑1 (MQ=255) cATTTTAGATTTACGTTTGCAAAAATTAACCAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATgtggtgg < 1:488860/251‑1 (MQ=255) aTTTTAGATTTACGTTTGCAAAAATTAACCAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAagaaga < 1:877363/242‑1 (MQ=255) aTTTTAGATTTACGTTTGCAAAAATTAACCAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGAtg < 1:331340/244‑1 (MQ=255) ttttAGATTTACGTTTGCAAAAATTAACCAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATgtggtggtg < 1:689472/251‑1 (MQ=255) tAGATTTACGTTTGCAAAAATTAACCAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGAcc < 1:772947/251‑1 (MQ=255) tAGATTTACGTTTGCAAAAATTAACCAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGAcc < 1:270327/251‑1 (MQ=255) ttACGTTTGCAAAAATTAACCAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTc < 1:818608/251‑1 (MQ=255) aCGTTTGCAAAAATTAACCAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTcc > 1:727974/1‑250 (MQ=255) cAAAAATTAACCAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAgg < 1:820551/251‑1 (MQ=255) aaaaaTTAACCAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGt < 1:798548/251‑1 (MQ=255) tAACCAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTAtgtg < 1:368204/251‑1 (MQ=255) ccAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATgtggtgg > 1:774704/1‑222 (MQ=255) aTTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAatat < 1:97889/251‑1 (MQ=255) gAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGAt > 1:884343/1‑180 (MQ=255) aCGAATACAAAAAATTATTGGATGGCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCGTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGc < 1:728871/250‑1 (MQ=255) aCGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGc < 1:846751/250‑1 (MQ=255) aaaaaTTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGcgtcgt < 1:98270/251‑1 (MQ=255) aaaTTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCgtgg < 1:892357/251‑1 (MQ=255) attGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTggta < 1:35313/251‑1 (MQ=255) ttGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTAtgt < 1:211429/203‑1 (MQ=255) aTGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTggtaaaggt < 1:330504/251‑1 (MQ=255) aTCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAGTTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATc < 1:802311/251‑1 (MQ=255) cGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGcac > 1:274329/1‑224 (MQ=255) cGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATc > 1:605169/1‑249 (MQ=255) gTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTc < 1:348738/175‑1 (MQ=255) gTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCa > 1:418304/1‑251 (MQ=255) attattGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGc > 1:598811/1‑216 (MQ=255) ttattGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATc > 1:858464/1‑127 (MQ=255) ttattGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTAtgt > 1:364020/1‑185 (MQ=255) ttattGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGcac < 1:884036/217‑1 (MQ=255) ttattGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCaa > 1:391994/1‑251 (MQ=255) ttattGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCaa > 1:520009/1‑251 (MQ=255) ttattGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGCGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGAAAATCCGCAACCaa > 1:201919/1‑251 (MQ=255) ttattGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATACGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCaa > 1:37502/1‑251 (MQ=255) ttattGTACATCTTGCGTAGCCCCGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTggtaaaggt > 1:419512/1‑237 (MQ=255) attGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGTGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGAc < 1:204713/205‑1 (MQ=255) tGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATg > 1:258721/1‑251 (MQ=255) tGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATg < 1:305759/251‑1 (MQ=255) cATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAaag < 1:315241/251‑1 (MQ=255) aTCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGc < 1:598016/206‑1 (MQ=255) ttGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAaagaaga > 1:673988/1‑251 (MQ=255) gCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCaagaa > 1:378452/1‑136 (MQ=255) gCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATcc < 1:771128/229‑1 (MQ=255) gCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCTAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAAAGAAGAAGAtttt > 1:196470/1‑251 (MQ=255) gCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAAAGAAGAAGAtttt > 1:829388/1‑251 (MQ=255) gCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAAAGAAGAAGAtttt > 1:254548/1‑251 (MQ=255) cGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGtggtgg < 1:850047/203‑1 (MQ=255) tAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAAAGAAGAAGATTTTATCGAAAAATTa > 1:863296/1‑251 (MQ=255) gAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAAAGAAGAAGATTTTATCGAAAAATTACTgg < 1:784339/250‑1 (MQ=255) gaaTTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGAc < 1:412322/156‑1 (MQ=255) gaaTTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCACAAcc < 1:423677/198‑1 (MQ=255) gAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAAAGAAGAAGATTTTATCGAAAAATTACTGGTTGCCAACACCCACGATACCAt > 1:464859/1‑251 (MQ=255) cAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAAAGAAGAAGATTTTATCGAAAAATTACTGGTTGCCAACACCCACGATACCATtc < 1:843051/250‑1 (MQ=255) tCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAAAGAAGAAGATTTTATCGAAAAATTACTGGTTGCCAACACCCACGATACCATTCTCTGc < 1:267455/251‑1 (MQ=255) tCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAAAGAAGAAGATTTTATCGAAAAATTACTGGTTGCCAACACCCACGATACCATTCTCTGc < 1:487949/251‑1 (MQ=255) aGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAAAGAAGAAGATTTTATCGAAAAATTACTGGTTGCCAACACCCACGATACCATTCTCTGCTtctc < 1:722355/250‑1 (MQ=255) aTTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAAAGAAGAAGATTTTAt > 1:40975/1‑198 (MQ=255) aTTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAAAGAAGAAGATTTTATCGAAAAATTACTGGTTGCCAACACCCACGATACCATTCTCTGCTTCTCCAGc > 1:828172/1‑250 (MQ=255) ttAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAAAGAAGAAGATTTTATCGAAAAATTACTGGTTGCCAACACCCACGATACCAt > 1:549155/1‑232 (MQ=255) cgcAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAAAGAAGAAGATTTTATCGAAAAATTACTGGTTGCCAACACCCACGATACCATTCTCTGCTTCTCCAGCCGCGGACGTTtat < 1:870643/250‑1 (MQ=255) cAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAAAGAAGAAGATTTTATCGAAAAATTACTGGTTGCCAACACCCACGATACCATTCTCTGCTTCTCCAGCCGCGGACGTTTATAc < 1:645339/250‑1 (MQ=255) cAGAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAAAGAAGAAGATTTTATCGAAAAATTACTGGTTGCCAACACCCACGATACCATTCTCTGCTTCTCCAGCCGCGGACGTTTATAc < 1:708253/250‑1 (MQ=255) gAACCGAAATCACGGCGGCTTCCGGTGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAAAGAAGAAGATTTTATCGAAAAATTACTGGTTGCCAACACCCACGATACCATTCTCTGCTTCTCCAGCCGCGGACGTTTATACTg > 1:561598/1‑250 (MQ=255) gcggcTTCCGGTGATATAAATCTGGAAGTTTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAAAGAAGAAGATTTTATCGAAAAATTACTGGTTGCCAACACCCACGATACCATTCTCTGCTTCTCCAGCCGCGGACGTTTATACTGGCTGAAAGTATATc < 1:696472/250‑1 (MQ=255) cTTCCGGTGATATAAATCTGGAAGATTTGATTGCGCAAGAAGATGTGGTGGTGTTCCTTTCCCGCGGAAGTTATGTGAAATATCAACCGATTACCGACTGCGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAAAGAAGAAGATTTTATCGAAAAATTTCTGGTTGCCTACACCCACGATGCCATTCTCTGCTTCTCCAGCCGCGGACGTTTATGCTGGCTGAAAGTATATCAACt < 1:669905/250‑1 (MQ=255) | ATATTATTTAACCGAAGTGCAAGCACAAGCCATTTTAGATTTACGTTTGCAAAAATTAACCAATTTAGGTCACGATGAAATCCTGGACGAATACAAAAAATTATTGGATGCCATCGGTAAATTATTGTACATCTTGCGTAGCCCTGAGCGTTTAATGGAAGTGATTCGTGAAGAATTGGAGCAAATCCGCGAGCAATTTAACGATCCGCGCAGAACCGAAATCACGGCGGCTTCCGGCGATATAAATCTGGAAGATTTGATTGCCCAAGAAGATGTGGTGGTGACCCTTTCCCACGAAGGTTATGTGAAATATCAACCGATTACCGACTACGAAGCACAGCGTCGTGGTGGTAAAGGTAAATCCGCAACCAAAATGAAAGAAGAAGATTTTATCGAAAAATTACTGGTTGCCAACACCCACGATACCATTCTCTGCTTCTCCAGCCGCGGACGTTTATACTGGCTGAAAGTATATCAACT > 1/1752209‑1752688 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |