| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,748,767 | G→T | intergenic (+28809/‑46075) | unknown → / → unknown | tRNA‑Asn‑GTT/tRNA‑Leu‑CAA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,748,767 | 0 | G | T | 98.7% | 208.6 / ‑4.5 | 76 | intergenic (+28809/‑46075) | unknown/unknown | tRNA‑Asn‑GTT/tRNA‑Leu‑CAA |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base T (46/29); total (47/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.82e-01 | |||||||||||
ATTTAATGAATTAAAACAAGCAATTAACAAGCCGACTTTGGTTTTTATTCACGGTTTATTCGGCGATATGAATAATTTGGGTATTATTGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGG‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATATTTACGATGAAAGCGTGCAACAGTTTATGCTGAAGTCTTTTGATG > 1/1748524‑1749008 | aTTTAATGAATTAAAACAAGCAATTAACAAGCCGACTCTGGTTTTTATTCACGGTTTATTCGGCGATATGAATAATTTGGGTATTATTGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTa < 1:545642/251‑1 (MQ=255) aaTGAATTAAAACAAGCAATTAACAAGCCGACTCTGGTTTTTATTCACGGTTTATTCGGCGATATGAATAATTTGGGTATTATTGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGAGTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATggg < 1:194134/251‑1 (MQ=255) aaCAAGCCGACTCTGGTTTTTATTCACGGTTTATTCGGCGATATGAATAATTTGGGTATTATTGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTa > 1:40430/1‑249 (MQ=255) gTTTATTCGGCGATATGAATAATTTGGGTATTATTGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATggg < 1:602693/202‑1 (MQ=255) ttATTCGGCGATATGAATAATTTGGGTATTATTGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAgg < 1:638368/251‑1 (MQ=255) ttATTCGGCGATATGAATAATTTGGGTATTATTGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAgg < 1:841742/251‑1 (MQ=255) aTTCGGCGATATGAATAATTTGGGTATTATTGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGAc < 1:767993/251‑1 (MQ=255) gCGATATGAATAATTTGGGTATTATTGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACtggtg > 1:517265/1‑251 (MQ=255) cGATATGAATAATTTGGGTATTATTGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACtggtgg < 1:136125/251‑1 (MQ=255) gATATGAATAATTTGGGTATTATTGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTAc > 1:702995/1‑211 (MQ=255) gATATGAATAATTTGGGTATTATTGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGAAAAAGGACTggtggt > 1:250139/1‑251 (MQ=255) atGAATAATTTGGGTATTATTGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGtgat < 1:806037/251‑1 (MQ=255) gAATAATTTGGGTATTATTGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGtgattg > 1:774886/1‑251 (MQ=255) aatTTGGGTATTATTGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGatat < 1:242380/251‑1 (MQ=255) atTTGGGTATTATTGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGatat > 1:620209/1‑250 (MQ=255) gggTATTATTGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACtggtgg > 1:674438/1‑236 (MQ=255) gTATTATTGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGcc > 1:221646/1‑250 (MQ=255) gTATTATTGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTAT‑GGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCa > 1:883522/1‑251 (MQ=255) attattGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTcc > 1:586696/1‑209 (MQ=255) attattGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCAt > 1:709622/1‑251 (MQ=255) attattGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCAt > 1:467249/1‑251 (MQ=255) cATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGaa > 1:118067/1‑251 (MQ=255) gATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTgcgc < 1:368227/223‑1 (MQ=255) ccATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACaagtaaaattggatgc > 1:765762/1‑235 (MQ=255) aTTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCat > 1:739056/1‑240 (MQ=255) aTTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGtttt > 1:848601/1‑251 (MQ=255) tttACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCa > 1:145046/1‑251 (MQ=255) tACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAAc < 1:515789/251‑1 (MQ=255) gggTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACggg > 1:752315/1‑251 (MQ=255) gATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTAtt > 1:234305/1‑251 (MQ=255) aTCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGaaa > 1:284130/1‑251 (MQ=255) aTCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGaaa > 1:306471/1‑251 (MQ=255) aTCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGaaa > 1:482012/1‑251 (MQ=255) aTCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGaaa > 1:651143/1‑251 (MQ=255) cACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCat > 1:293074/1‑216 (MQ=255) cTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATggg < 1:320968/105‑1 (MQ=255) cTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCt > 1:241167/1‑250 (MQ=255) cacaGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCACTCCTTATCTCTGCGCGAAGTGATTTTGGTGGGT‑CATTCTAGGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATAc < 1:344862/251‑1 (MQ=255) cacaGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATAc < 1:594617/251‑1 (MQ=255) cacaGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATAc < 1:560852/251‑1 (MQ=255) cacaGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATAc < 1:354065/251‑1 (MQ=255) ccaGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATAcc < 1:707954/250‑1 (MQ=255) caGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATAcc > 1:543978/1‑250 (MQ=255) gaagaaATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGGTCATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCat > 1:243994/1‑196 (MQ=255) gAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCa > 1:332324/1‑251 (MQ=255) aaCTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCaa > 1:827991/1‑251 (MQ=255) cTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATAcc > 1:458994/1‑235 (MQ=255) cTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCaaa > 1:755814/1‑250 (MQ=255) aTGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCa > 1:774922/1‑251 (MQ=255) gCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGc > 1:664070/1‑197 (MQ=255) tgtTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATATTTa < 1:797389/250‑1 (MQ=255) tgtTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATATTTa < 1:133287/250‑1 (MQ=255) gtTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATg > 1:260321/1‑76 (MQ=255) gtTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATATTTACg > 1:51307/1‑251 (MQ=255) tCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATATTTACGATGAAAg < 1:503411/250‑1 (MQ=255) aTTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATAtt < 1:179334/237‑1 (MQ=255) aTTCAATCCTTATCACTGCGCGAAGAGATTTTCGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTggcg > 1:374363/1‑75 (MQ=255) aTCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATATTTACGATGAAAGCGTGCaa > 1:682383/1‑250 (MQ=255) tCCTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATATTTa < 1:874515/233‑1 (MQ=255) ccTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATg > 1:587056/1‑138 (MQ=255) ccTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCatgatg > 1:638497/1‑147 (MQ=255) ccTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATATTTAc < 1:715395/233‑1 (MQ=255) ccTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATATTTACGATGAAAg < 1:746051/241‑1 (MQ=255) ccTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATATTTACGATGAAAGCGTGCAAc < 1:735440/249‑1 (MQ=255) ccTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATATTTACGATGAAAGCGTGCAACAg > 1:675603/1‑251 (MQ=255) ccTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATATTTACGATGAAAGCGTGCAACAg > 1:858632/1‑251 (MQ=255) ccTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATATTTACGATGAAAGCGTGCAACAg < 1:184459/251‑1 (MQ=255) ccTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATATTTACGATGAAAGCGTGCAACAg > 1:329516/1‑251 (MQ=255) ccTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATATTTACGATGAAAGCGTGCAACAg > 1:490077/1‑251 (MQ=255) ccTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATATTTACGATGAAAGCGTGCAACAg > 1:552970/1‑251 (MQ=255) cTTATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATAcc < 1:575661/193‑1 (MQ=255) ttATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATATTTACGATGAAAGCGTGCAACAGtt < 1:816914/251‑1 (MQ=255) tATCACTGCGCGAAGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATATTTACGATGAAAGCGTGCAACAGttt < 1:861952/251‑1 (MQ=255) aaGTGATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATATTTACGATGAAAGCGTGCAACAGTTTATGCTGAAGt > 1:328122/1‑249 (MQ=255) gATTTTGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATATTTACGATGAAAGCGTGCAACAGTTTATGCTGAAGTCTTTTg > 1:865975/1‑251 (MQ=255) ttGGTGGGT‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATATTTACGATGAAAGCGTGCAACAGTTTATGCTGAAGTCTTTTGATg > 1:842546/1‑250 (MQ=255) | ATTTAATGAATTAAAACAAGCAATTAACAAGCCGACTTTGGTTTTTATTCACGGTTTATTCGGCGATATGAATAATTTGGGTATTATTGCCCGCGCATTTAGTGAAGATTATGCCATTTTACGGGTAGATTTGCGCAATCACGGCGCGAGCTTTCACAGTGAAGAAATGAACTATGATTTGATGGCGGAAGATGTGTTTCATGTCATTCAATCCTTATCACTGCGCGAAGTGATTTTGGTGGGG‑CATTCTATGGGCGGCAAAACCGCCATGGTACTGGCGGCGAATTCTCCTGATTTGGTAAAAGGACTGGTGGTGATTGATATTGCGCCCATTGCCTACGGCGAACATGGGCATGATGCGGTTTTCAACGGGTTATTTGCGGTGAAAAACACGCAGCCTCATACCCGTCAGGAAGCCAAACCAATTTTGGCACAACATATTTACGATGAAAGCGTGCAACAGTTTATGCTGAAGTCTTTTGATG > 1/1748524‑1749008 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |