| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,709,385 | A→G | intergenic (‑39437/‑10498) | unknown ← / → unknown | tRNA‑Arg‑CCG/tRNA‑Asn‑GTT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,709,385 | 0 | A | G | 100.0% | 61.4 / NA | 23 | intergenic (‑39437/‑10498) | unknown/unknown | tRNA‑Arg‑CCG/tRNA‑Asn‑GTT |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (8/15); total (8/15) | |||||||||||
GGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAATGGAGACATTCTACTAAAATAAAATTTCATTTTAAAATATTTTTTGAAGTAATATTCCAACTATGTGATCTACTTCTCATTTTTGAAATAAAGCTTCATTCTCTATTTAAAAACGATTTTTTTACTTTAGAATGCAAACTGAGCTGTAATTCAAACATCCCATATTCATTATTTGTTACTACAGGAGTGTAGCCATGAAACTAGCCAAACTTTTCCTTGCCACTGCAATTGCACTAGGTG > 1/1709139‑1709625 | gggCGCACGGTTTTTAAATTGCCCCCCCCTCCAAGGCGCACCCCCCCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTgg < 1:408515/250‑1 (MQ=255) ccACGTCTTTAAAATTGCCCCCCCCTCCAAGGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACa < 1:386460/250‑1 (MQ=255) cgctttttAAATTGCCCACCCCTCCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTc < 1:265338/247‑1 (MQ=255) gCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACa > 1:868139/1‑246 (MQ=255) gcccacacctcaaaggcccacccccgccgccccgccgATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACa < 1:216808/214‑1 (MQ=255) gTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACa > 1:134311/1‑235 (MQ=255) ctccaatgcccccccccgccgccccgccgATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACTATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACTAAAATAAAATTTCAttt < 1:435298/238‑1 (MQ=255) aCGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACTAAAATAAAATTTCATTTTAAAATATTTTTTGAAATAATATTCCAACTAt > 1:209759/1‑251 (MQ=255) tGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACTAAAATAAAATTTCATTTTAAAATATTTTTTGAAATAATATTCCAACTATGTGATCTAc < 1:387401/251‑1 (MQ=255) tGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACTAAAATAAAATTTCATTTTAAAATATTTTTTGAAATAATATTCCAACTATGTGATCTAc < 1:45375/251‑1 (MQ=255) aCAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACa < 1:544093/171‑1 (MQ=255) tcatcCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTctact < 1:51997/151‑1 (MQ=255) tcCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACTAAAATAAAATTTCATTTTAAAATATTTTTTGAAATAATATTCCAACTATGTGATCTACTTCTCATTTTTGAAATAAAGc < 1:388346/227‑1 (MQ=255) cAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACTAAAATAAAATTTCATTTTAAAATATTTTTTGAAATAATATTCCAACTATGTGATCTACTTCTCATTTTTGAAATAAAGCTTCATTCTCTATTTAAAAACGATTTTTTTACTTTAGAATGCaa > 1:794681/1‑251 (MQ=255) gTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACTAAAATAAAATTTCATTTTAAAATATTTTTTGAAATAATATTCCAACTATGTGATCTAc > 1:718156/1‑177 (MQ=255) aaaCGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACTAAAATAAAATTTCATTTTAAAATATTTTTTGAAATAATATTCCAACTATGTGATCTACTTCTCATTTTTGAAATAAAGCTTCATTCTCTATTTAAAAACGATTTTTTTACTTTAGAATGCAAACTGAGCTGTAATTCAAACATCCCata < 1:771915/251‑1 (MQ=255) ggCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACTAAAATAAAATTTCATTTTAAAATATTTTTTGAAATAATATTCCAACTATGTGATCTACTTCTCATTTTTGAAATAAAGCTTCATtc < 1:390569/184‑1 (MQ=255) tGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACTAAAATAAAATTTCATTTTAAAATATTTTTTGTAATAATATTCCAACTATGTGATCTACTTCTCATTTTTGAAATAAAGCTTCATTCTCTATTTAAAAACGATTTTTTTACTTTAGAATGCAAACTGAGCTGTAATTCAAACATCCCATATTCATTATTTGTTACTACAGGAg < 1:237341/251‑1 (MQ=255) tGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACTAAAATAAAATTTCATTTTAAAATATTTTTTGAAATAATATTCCAACTATGTGATCTACTTCTCATTTTTGAAATAAAGCTTCATTCTCTATTTAAAAACGATTTTTTTACTTTAGAATGCAAACTGAGCTGTAATTCAAACATCCCATATTCATTATTTGTTACTACAGGAg < 1:71736/251‑1 (MQ=255) cATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACTAAAATAAAATTTCATTTTAAAATATTTTTTGAAATAATATTCCAACTATGTGATCTACTTCTCATTTTTGAAATAAAGCTTCATtc < 1:756924/151‑1 (MQ=255) ctcctcTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACTAAAATAAAATTTCATTTTAAAATATTTTTTGAAATAATATTCCAACTATGTGATCTACTTCTCATTTTTGAAATAAAGCTTCATTCTCTATTTAAAAACGATTTTTTTACTTTAGAATGCAAACTGAGCTGTAATTCAAACATCCCATAtt > 1:56457/1‑208 (MQ=255) aTTCTAGTCAGTGGAGACATTCTACTAAAATAAAATTTCATTTTAAAATATTTTTTGAAATAATATTCCAACTATGTGATCTACTTCTCATTTTTGAAATAAAGCTTCATTCTCTATTTAAAAACGATTTTTTTACTTTAGAATGCAAACTGAGCTGTAATTCAAACATCCCATATTCATTATTTGTTACTACAGGAGTGTAGCCATGAAACTAGCCAAACTTTTCCTTGCCACTGCAATTGCACTAGgtg > 1:636916/1‑251 (MQ=255) aGTCAGTGGAGACATTCTACTAAAATAAAATTTCATTTTAAAATATTTTTTGAAATAATATTCCAACTATGTGATCTACTTCTCATTTTTGAAATAAAGCTTCATTCTCTATTTAAAAACGATTTTTTTACTTTAGAATGCAAACTGAGCTGTAATTCAAACATCCCATATTCATTATTTGTTACTACAGGAg > 1:106523/1‑193 (MQ=255) | GGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAATGGAGACATTCTACTAAAATAAAATTTCATTTTAAAATATTTTTTGAAGTAATATTCCAACTATGTGATCTACTTCTCATTTTTGAAATAAAGCTTCATTCTCTATTTAAAAACGATTTTTTTACTTTAGAATGCAAACTGAGCTGTAATTCAAACATCCCATATTCATTATTTGTTACTACAGGAGTGTAGCCATGAAACTAGCCAAACTTTTCCTTGCCACTGCAATTGCACTAGGTG > 1/1709139‑1709625 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |