| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,693,905 | A→G | intergenic (‑23957/‑25978) | unknown ← / → unknown | tRNA‑Arg‑CCG/tRNA‑Asn‑GTT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,693,905 | 0 | A | G | 98.7% | 204.4 / NA | 77 | intergenic (‑23957/‑25978) | unknown/unknown | tRNA‑Arg‑CCG/tRNA‑Asn‑GTT |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (48/28); total (49/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCATTACTTCATAAACGCTGCAAAAATTGACCGCACTTAGTAGCATTTTTGCCAAGCATGGATCGACTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAAGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGCCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATAGCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGCCAAATTGGTTCGCAGGATTTCCGGATCGGTAAATTCCGGGCGATTGTTGAAATCGTCTTCCGAATAAAGACGAATACAAATGC > 1/1693658‑1694143 | tCATTACTTCATAAACGCTGCAAAAATTGACCGCACTTAGTAGCATTTTTGCCAAGCATGGATCGACTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAgggg > 1:500670/1‑251 (MQ=255) aCTTCATAAACGCTGCAAAAATTGACCGCACTTAGTAGCATTTTTGCCAAGCATGGATCGACTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGg‑aga > 1:114523/1‑251 (MQ=255) ttCATAAACGCTGCAAAAATTGACCGCACTTAGTAGCATTTTTGCCAAGCATGGATCGACTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGAtt > 1:46619/1‑251 (MQ=255) tCATAAACGCTGCAAAAATTGACCGCACTTAGTAGCATTTTTGCCAAGCATGGATCGACTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGAttt > 1:866387/1‑251 (MQ=255) cATAAACGCTGCAAAAATTGACCGCACTTAGTAGCATTTTTGCCAAGCATGGATCGACTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTg > 1:687521/1‑251 (MQ=255) aaaCGCTGCAAAAATTGACCGCACTTAGTAGCATTTTTGCCAAGCATGGATCGACTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGa < 1:100586/251‑1 (MQ=255) gCAAAAATTGACCGCACTTAGTAGCATTTTTGCCAAGCATGGATCGACTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑Gc > 1:434640/1‑249 (MQ=255) aaaaTTGACCGCACTTAGTAGCATTTTTGCCAAGCATGGATCGACTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCttcc < 1:531446/251‑1 (MQ=255) aCCGCACTTAGTAGCATTTTTGCCAAGCATGGATCGACTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCaa < 1:838312/251‑1 (MQ=255) aCCGCACTTAGTAGCATTTTTGCCAAGCATGGATCGACTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCaa < 1:161646/251‑1 (MQ=255) aTTTTTGCCAAGCATGGATCGACTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAAttcttc < 1:188644/251‑1 (MQ=255) aGCATGGATCGACTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGgggg < 1:394710/198‑1 (MQ=255) aGCATGGATCGACTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCaa > 1:800827/1‑226 (MQ=255) aGCATGGATCGACTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAAttt > 1:274565/1‑250 (MQ=255) aGCATGGATCGACTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAAttt > 1:656897/1‑250 (MQ=255) aGCATGGATCGACTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAAttt > 1:173768/1‑250 (MQ=255) gCATGGATCGACTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCa > 1:489510/1‑251 (MQ=255) gATCGACTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCa > 1:897138/1‑251 (MQ=255) aCTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATc > 1:721227/1‑248 (MQ=255) aCTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATc > 1:737963/1‑248 (MQ=255) aCTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCAATTCCAACGCCCCAAATTTTCCCAAAAATTACACGCCATc > 1:513589/1‑248 (MQ=255) ggAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAat < 1:264396/250‑1 (MQ=255) gAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAatat > 1:601468/1‑251 (MQ=255) ttGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCTTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCACTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATcc < 1:445562/250‑1 (MQ=255) aGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAat > 1:509144/1‑227 (MQ=255) gtgtgtGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGa < 1:30648/169‑1 (MQ=255) gtgtgAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCTTGAAAACGAGGGGAGCGAAGTTCCTCCTCCTGATAAAATACCCTTTCCCTCCCCCGGTTAAGGGGGGGACTAACGGAAGGC‑GAAGGGGGCAGATTTGCG‑ATAGGCCTTCCATTCAAACGCCCCCACTCCTTCCAACAATTTCACCCCACCCGGAATATGCCGTTTATCCGGTCCATcaccgaa > 1:444494/1‑244 (MQ=255) gtgAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACgg > 1:341354/1‑251 (MQ=255) gaACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGaa < 1:637673/244‑1 (MQ=255) ttttCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAAt < 1:693197/251‑1 (MQ=255) ttCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATat < 1:542910/251‑2 (MQ=255) aGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAat > 1:496075/1‑198 (MQ=255) ggAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAat > 1:162226/1‑194 (MQ=255) gTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGc < 1:519697/227‑1 (MQ=255) aTTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCg > 1:233624/1‑251 (MQ=255) ttCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGg‑aga < 1:637848/125‑1 (MQ=255) ttCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATat < 1:7202/232‑2 (MQ=255) cccccccTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCa > 1:783634/1‑251 (MQ=255) cccccTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCAtt < 1:458839/251‑1 (MQ=255) cccccTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCAtt > 1:276967/1‑251 (MQ=255) ccccTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCAttt > 1:606023/1‑251 (MQ=255) ccTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAAttc > 1:211685/1‑154 (MQ=255) ccTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATcc > 1:340012/1‑194 (MQ=255) ccTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTCCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATcc > 1:607284/1‑194 (MQ=255) gCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAAt > 1:461430/1‑251 (MQ=255) gCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAAt > 1:117252/1‑251 (MQ=255) ccTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAat > 1:421728/1‑174 (MQ=255) ggCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAATCACCGAc < 1:147602/250‑1 (MQ=255) cAGATCCCACTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGc < 1:42004/250‑1 (MQ=255) gATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGCCaa > 1:384957/1‑251 (MQ=255) ccTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGCCAAATTGGt > 1:218417/1‑251 (MQ=255) cTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATat < 1:32710/201‑2 (MQ=255) tGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAAc < 1:498687/184‑1 (MQ=255) gagCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGTGGAAGCACCGAAGGCGGAGGGGGG‑AGATTTCCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGCCGTTTATCCGGTGCATCCACGAATGGGAAGGCTCCAATATCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGCCAAATTGGTTCGCAGGATTTCCg > 1:411094/1‑251 (MQ=255) gagCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAat < 1:745838/144‑1 (MQ=255) tCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGCCAAATTGGTTCGCAGGATTTCCGGATCGGTaa > 1:888539/1‑251 (MQ=255) tCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGCCAAATTGGTTCGCAGGATTTCCGGATCGGTaa > 1:525827/1‑251 (MQ=255) tCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGCCAAATTGGTTCGCAGGATTTCCGGATCGGTaa > 1:495214/1‑251 (MQ=255) tctGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGCCAAATTGGTTCGCAGGATTTCCGGATCGGTAAATTCCgg > 1:637738/1‑251 (MQ=255) tGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGCCAAATTGGTTCGCAGGATTTCCGGATCGGTAAATTCCGGGc < 1:541026/251‑1 (MQ=255) gATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGc > 1:595172/1‑115 (MQ=255) gATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGCCAAATTGGTTCGCAGGATTTCCGGATCGGTAAATTc > 1:222402/1‑245 (MQ=255) gATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGCCAAATTGGTTCGCAGGATTTCCGGATCGGTAAATTCCGGGCg > 1:181570/1‑251 (MQ=255) aaaTACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGc < 1:223578/139‑1 (MQ=255) tACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGCCAAATTGGTTCGCAGGATTTCCGGATCGGTAAATTCCGGGCGAttgttg > 1:231214/1‑251 (MQ=255) ttCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCa > 1:39958/1‑135 (MQ=255) ccccccTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTGCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGCCAAATTGGTTCGCAGGATTTCCGGATCGGTAAATTCCGGGCGATTGTTGAAATCGTCTTc < 1:454942/250‑1 (MQ=255) cccccTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAacac < 1:848044/166‑1 (MQ=255) ccccTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGCCAAATTGGTTCGCAGGATTTCCGGATCGGTAAATTc > 1:738921/1‑225 (MQ=255) ccccTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGCCAAATTGGTTCGCAGGATTTCCGGATCGGTAAATTCCGGGCGATTGTTGAAATCGTCTTCCg > 1:742171/1‑251 (MQ=255) ccTGTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGCCAAATTGGTTCGCAGGATTTCCGGATCGGTAAATTCCGGGCGATTGTTGAAATCGTCTTCCGaa > 1:769064/1‑251 (MQ=255) gTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAat > 1:180868/1‑100 (MQ=255) gTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAAc < 1:234460/153‑1 (MQ=255) gTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGCCAAATTGGTTCGCAGGATTTCCGGATCGGTAAATTc > 1:527926/1‑220 (MQ=255) gTTTACGGGGGGAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGCCAAATTGGTTCGCAGGATTTCCGGATCGGTAAATTCCGGGCGATTGTTGAAATCGTCTTCCGAAt > 1:563789/1‑249 (MQ=255) gggggAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGCCAAATTGGTTCGCAGGATTTCCGGATCGGTAAATTCCGGGCGATTGTTGAAATCGTCTTCCGAATAAAGa > 1:339053/1‑247 (MQ=255) gAAGTACCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGCCAAATTGGTTCGCAGGATTTCCGGATCGGTAAATTCCGGGCGATTGTTGAAATCGTCTTCCGAATAAAGACGAATAc < 1:344591/250‑1 (MQ=255) aCCGAAGGCGGAGGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGTCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATATCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGCCAAATTGGTTCGCAGGATTTCCGGATCGGTAAATTCCGGGCGATTGTTGAAATCGTCTTCCGAATAAAGACGAATACAAATGc < 1:702270/251‑1 (MQ=255) | TCATTACTTCATAAACGCTGCAAAAATTGACCGCACTTAGTAGCATTTTTGCCAAGCATGGATCGACTGGGAGCTGGGCGAGTTGGCGACCGAGGTGTGTGAGAACACGTTTTTCTTTGAAAGTTGGAGTATTCCCCCCCTCAGCCCTACGGGCAGATCCCCCTGTAAACGGAGGGAGCGAAGATCCTTCTTCTGATAAAATACCCTTTCCCTCCCCCTGTTTACGGGGGGAAGTACCGAAGGCGGAAGGGGG‑AGATTTGCGAATA‑GCCTTCCATTCCAACGCCCCCAATTCTTCCAACAATTTCACGCCATCCTGAATATGCCGTTTATCCGGTGCATCCACGAACGGGAAGGCTTCAATAGCATCCAAACCCAACACCGTCATTTGCAAAATCACCGACGCCAAATTGGTTCGCAGGATTTCCGGATCGGTAAATTCCGGGCGATTGTTGAAATCGTCTTCCGAATAAAGACGAATACAAATGC > 1/1693658‑1694143 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |