| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,649,813 | A→G | intergenic (+7974/+14562) | unknown → / ← unknown | tRNA‑Gly‑GCC/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,649,813 | 0 | A | G | 100.0% | 171.7 / NA | 67 | intergenic (+7974/+14562) | unknown/unknown | tRNA‑Gly‑GCC/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (37/30); total (37/30) | |||||||||||
ATTAAATAACGATGATGTACCACAATGAAACTCGGCAATATCTTTAAATTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCATTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTATGGGTGTTGTCAAACCGTCGCGCCAATGACGAAATGGGGCAATGGCTGGAAGATCATGAAAAACGTTCGGAGCTGTTGGGCGGAGCGGGTAGCGTGCTCG > 1/1649575‑1650058 | aTTAAATAACGATGATGTACCACAATGAAACTCGGCAATATCTTTAAATTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAAATTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAACGCTTTTAGATAAGGAACCGCGTTTTCATGCCGt > 1:727814/1‑251 (MQ=255) aTAACGATGATGTACCACAATGAAACTCGGCAATATCTTTAAATTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTaa > 1:197249/1‑251 (MQ=255) aaCGATGATGTACCACAATGAAACTCGGCAATATCTTTAAATTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAAcc < 1:137743/251‑1 (MQ=255) aaCGATGATGTACCACAATGAAACTCGGCAATATCTTTAAATTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAAcc < 1:369307/251‑1 (MQ=255) atgatgTACCACAATGAAACTCGGCAATATCTTTAAATTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGGTTTCATGCCGTATTAAACCGCa > 1:743525/1‑251 (MQ=255) atgTACCACAATGAAACTCGGCAATATCTTTAAATTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTTATGCCGTATTAACCCGCAACg > 1:796432/1‑251 (MQ=255) gTACCACAATGAAACTCGGCAATATCTTTAAATTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAAACCTTTTTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGGTTTCATGCCGGATTAACCCGCAACgg > 1:642493/1‑250 (MQ=255) ccACAATGAAACTCGGCAATATCTTTAAATTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTGACCCCTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAAGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGAt > 1:424880/1‑251 (MQ=255) caATGAAACTCGGCAATATCTTTAAATTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGTATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTAc < 1:441856/251‑1 (MQ=255) caATGAAACTCGGCAATATCTTTAAATTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCCACCCAAAAATTTTTGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAACGCTTTTAGATAAGGATCCGCGTTTTCATGc > 1:374669/1‑226 (MQ=255) caATGAAACTCGGCAATATCTTTAAATTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTAc < 1:832392/251‑1 (MQ=255) caATGAAACTCGGCAATATCTTTAAATTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCCGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAACGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTa > 1:198748/1‑250 (MQ=255) caATGAAACTCGGCAATATCTTTAAATTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCCGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAACGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTa > 1:662164/1‑250 (MQ=255) caATGAAACTCGGCAATATCTTTAAATTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCCGCGCTATCGGGCGCAACCTAAAAAATTATGAAAAAAAAGTAAACCTTTCTATCGCCCCGGAATTAAAAACGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTa > 1:245403/1‑250 (MQ=255) gAAACTCGGCAATATCTTTAAATTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCCGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCCTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACtttt > 1:829495/1‑250 (MQ=255) cTCGGCAATATCTTTAAATTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTc < 1:817228/251‑1 (MQ=255) gCAATATCTTTAAATTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAAACCCCGGCGCCATCGGGCGCCACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTAttttcttt > 1:534376/1‑246 (MQ=255) tCTTTAAATTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCg > 1:676312/1‑243 (MQ=255) cTTTAAATTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAAcc < 1:417177/217‑1 (MQ=255) aaaTTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTAc > 1:162973/1‑228 (MQ=255) aaTTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGGGAATTAAAAGCGCTTTTAGATAAGGAACCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTTCGTGCCGCAACGTTc > 1:707271/1‑250 (MQ=255) attTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAGTTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGaaa < 1:313331/251‑1 (MQ=255) attTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGaaa < 1:91357/251‑1 (MQ=255) tttCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAAt < 1:900472/251‑1 (MQ=255) cTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACgg < 1:724244/212‑1 (MQ=255) cTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAAACCCCGGCGCCATCCGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCCCCCCGGAATTAAAAACGCTTTTATATAAAGATCCGCGGTTTCATGCCGTATTAACCCCCCACGGCGATTACTTTTTTTcctgtctctttttcacatctccccg > 1:894159/1‑228 (MQ=255) gTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAACGCTTTTTGATAAGGATCCGCGTTTTCATGCCGGATTAACCCGCAACGGCGATTACTTTATTTTCGTGCCGCAACGTTCCGAAATTTcgcg > 1:573731/1‑251 (MQ=255) tGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGGGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCTGTATTAACCCGCAACGGCGATTACTTTATTACCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTgg < 1:561739/249‑1 (MQ=255) gTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAAccc < 1:401383/162‑1 (MQ=255) gTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGAt > 1:147716/1‑251 (MQ=255) cGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAAcc < 1:362065/157‑1 (MQ=255) ggACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGa < 1:211650/250‑1 (MQ=255) aCAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAAc < 1:632981/251‑1 (MQ=255) ttGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAAACCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTTACCCGCAACGGCGATTACTTTATTTTCGTGCCGCAACGGTCCGAAATTGCGCGGAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTTCTCAGAAAACCCg > 1:23404/1‑251 (MQ=255) gCCGTTGATCCCGGTCATGGCGGGAAAGACCCCCGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGGATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGaa > 1:782953/1‑251 (MQ=255) gTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCCATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAAttt > 1:515537/1‑251 (MQ=255) gATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTAcg > 1:848267/1‑251 (MQ=255) aTCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTAcg > 1:160546/1‑250 (MQ=255) tGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTc < 1:626060/150‑1 (MQ=255) cGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTAt < 1:897432/251‑1 (MQ=255) aaaGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTATggg < 1:607068/250‑1 (MQ=255) gACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTc < 1:236998/140‑1 (MQ=255) ccccGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCAtt < 1:466052/196‑1 (MQ=255) cccGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTATGGGTGTTGTc < 1:231651/251‑1 (MQ=255) gcgcTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAAcc > 1:613256/1‑110 (MQ=255) gcgcTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTATGGGTGTTGTCaaa > 1:302204/1‑250 (MQ=255) aCCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTATGGGTGTTGTCAAACCGTCGCGCCAATGa > 1:559203/1‑250 (MQ=255) cTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAAcc > 1:567668/1‑93 (MQ=255) aTGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTATGGGTGTTGTCAAACCGTCGCGCCAATGACGAAATGGGGCAATGGCTGGaa > 1:463528/1‑251 (MQ=255) aTGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTATGGGTGTTGTCAAACCGTCGCGCCAATGACGAAATGGGGCAATGGCTGGaa > 1:178048/1‑251 (MQ=255) tGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTATGGGTGTTGTCAAACCGTCGCGCCAATGACGAAATGGGGCAATGGCTGGAAg < 1:517433/251‑1 (MQ=255) tGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTATGGGTGTTGTCAAACCGTCGCGCCAATGACGAAATGGGGCAATGGCTGGAAg < 1:174828/251‑1 (MQ=255) tAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTATGGGTGTTGTCAAACCGTCGCGCCAATGACGAAATGGGGCAATGGCTGGAAGa < 1:679812/250‑1 (MQ=255) aaCCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTATggg > 1:550068/1‑200 (MQ=255) cccTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAAccc > 1:847361/1‑171 (MQ=255) ccTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGcac < 1:521719/124‑1 (MQ=255) ccTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTATGGGTGTTGTCAAACCGTCGCGCCAATGACGAAATGGGGCAATGGCTGGAAGATCATg > 1:245241/1‑251 (MQ=255) tttCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTAt > 1:73/1‑192 (MQ=255) tCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTAt > 1:82982/1‑190 (MQ=255) gCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAAccc < 1:206137/58‑1 (MQ=255) ttAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTATGGGTGTTGTCAAACCGTCGCGCCAATGACGAAATGGGGCAATGGCTGGAAGATCATGAAAAACGTTCGGAGCTGtt > 1:500321/1‑251 (MQ=255) tAAAAGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTATGGGTGTTGTCAAACCGTCGCGCCAATGACGAAATGGGGCAATGGCTGGAAGATCATGAAAAACGTTCGGAGCTGTTg > 1:835339/1‑251 (MQ=255) aaGCGCTTTTAGATAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTATGGGTGTTGTCAAACCGTCGCGCCAATGACGAAATGGGGCAATGGCTGGAAGATCATGAAAAACGTTCGGAGCTGTTGGGc < 1:192374/251‑1 (MQ=255) aTAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTATGGGTGTTGTCAAACCGTCGCGCCAATGACGAAATGGGGCAATGGCTGGAAGATCATGAAAAACGTTCGGAGCTGTTGGGCGGAGCGGGTAg < 1:163814/250‑1 (MQ=255) tAAGGATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTATGGGTGTTGTCAAACCGTCGCGCCAATGACGAAATGGGGCAATGGCTGGAAGATCATGAAAAACGTTCGGAGCTGTTGGGCGGAGCGGGTAGCg < 1:721220/251‑1 (MQ=255) gATCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTATGGGTGTTGTCAAACCGTCGCGCCAATGACGAAATGGGGCAATGGCTGGAAGATCATGAAAAACGTTCGGAGCTGTTGGGCGGAGCGGGTAGCGTg < 1:893415/249‑1 (MQ=255) tCCGCGTTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTATGGGTGTTGTCAAACCGTCGCGCCAATGACGAAATGGGGCAATGGCTGGAAGATCATGAAAAACGTTCGGAGCTGTTGGGCGGAGCGGGTAGCGTGCTCg > 1:40681/1‑251 (MQ=255) | ATTAAATAACGATGATGTACCACAATGAAACTCGGCAATATCTTTAAATTATTTCTTGTCAACAGCGTTTTTTTCTTTGCAATGCCCGTTCTCGCCGGTAACGCATGGACAATTGCCGTTGATCCCGGTCATGGCGGGAAAGACCCCGGCGCTATCGGGCGCAACCTAAAAATTTATGAAAAAAATGTAACCCTTTCTATCGCCCGTGAATTAAAAGCGCTTTTAGATAAGGATCCGCATTTTCATGCCGTATTAACCCGCAACGGCGATTACTTTATTTCCGTGCCGCAACGTTCCGAAATTGCGCGTAAGCACAAAGCCAATTATTTGGTTTCCATTCATGCAGATTCCTCAGAAACCCCGAATTTACGCGGCGCTTCCGTATGGGTGTTGTCAAACCGTCGCGCCAATGACGAAATGGGGCAATGGCTGGAAGATCATGAAAAACGTTCGGAGCTGTTGGGCGGAGCGGGTAGCGTGCTCG > 1/1649575‑1650058 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |