Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,648,682 T→C intergenic (+6843/+15693) unknown → / ← unknown tRNA‑Gly‑GCC/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,648,6820TC100.0% 64.7 / NA 24intergenic (+6843/+15693)unknown/unknowntRNA‑Gly‑GCC/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (13/11);  total (13/11)

ATCATTTTATTTTTATCAATACCTACATTTCTATTAATTTCAACTAAAATAATCATAAATTTCAACGATGAAAATGAATCCAAAGAGATTTATGACGAAAAATATAATAATAGCTACTATGCGACGAAAAAATTACTTAATAAAAACAATTTAGAAAATAAAATTATATTACCTCCTATTGATTTAGGTGCTGCCGTTATTGCTACAACATCCAATGCTTCTATTTCTGCGCCTTACCATAGAAATATAAGAGGAAATTCTGATACAATGCGGTTTTATACGTCAGTTAATACAGATGATGCAGAAAAATACTTGATTAGAAATAATGTGGATTATATTCTGATTGAGAAAAATTTTGCCAATGTTTTAGCCGATAAATATAAGGGGAAAGAAATCATGGCTCAAAAATTAATAGATAAGAAAGATATACCTGATTATCT  >  1/1648443‑1648882
                                                                                                                                                                                                                                               |                                                                                                                                                                                                        
aTCATTTTATTTTTATCAATACCTACATTTCTATTAATTTCAACTAAAATAATCATAAATTTCAACGATGAAAATGAATCCAAAGAGATTTATGACGAAAAATATAATAATAGCTACTATGCGACGGAAAAATTACTTAATAAAAACAATTTAGAAAATAAAATTATATTACCTCCTATTGATTTAGGTGCTGCCGTTATTGCTACAACATCCAATGCTTCTATTTCTGCGCCTTACCACAGAAATATAag                                                                                                                                                                                               <  1:16505/251‑1 (MQ=255)
               tCAATACCTACATTTCTATTAATTTCAACTAAAATAATCATAAATTTCAACGATGAAAATGAATCCAAAGAGATTTATGACGAAAAATATAATAATAGCTACTATGCGACGGAAAAATTACTTAATAAAAACAATTTAGAAAATAAAATTATATTACCTCCTATTGATTTAGGTGCTGCCGTTATTGCTACAACATCCAATGCTTCTATTTCTGCGCCTTACCACAGAAATATAAGAGGAAATTCTGATAc                                                                                                                                                                                <  1:438127/251‑1 (MQ=255)
                                aTTAATTTCAACTAAAATAATCATAAATTTCAACGATGAAAATGAATCCAAAGAGATTTATGACGAAAAATATAATAATAGCTACTATGCGACGGAAAAATTACTTAATAAAAACAATTTAGAAAATAAAATTATATTACCTCCTATTGATTTAGGTGCTGCCGTTATTGCTACAACATCCAATGCTTCTATTTCTGCGCCTTACCACAGAAATATAAGAGGAAATTCTGATACAATGCGGTTTTATACGt                                                                                                                                                               >  1:336669/1‑251 (MQ=255)
                                          aCTAAAATAATCATAAATTTCAACGATGAAAATGAATCCAAAGAGATTTATGACGAAAAATATAATAATAGCTACTATGCGACGGAAAAATTACTTAATAAAAACAATTTAGAAAATAAAATTATATTACCTCCTATTGATTTAGGTGCTGCCGTTATTGCTACAACATCCAATGCTTCTATTTCTGCGCCTTACCACAGAAATATAAGAGGAAATTCTGATACAATGCGGTTTTATACGTCAGTTAATAc                                                                                                                                                     <  1:197881/251‑1 (MQ=255)
                                                     cATAAATTTCAACGATGAAAATGAATCCAAAGAGATTTATGACGAAAAATATAATAATAGCTACTATGCGACGGAAAAATTACTTAATAAAAACAATTTAGAAAATAAAATTATATTACCTCCTATTGATTTAGGTGCTGCCGTTATTGCTACAACATCCAATGCTTCTATTTCTGCGCCTTACCACAGAAATATAAGAGGAAATTCTGATA‑AATGCGGTTTTATACGTCAGTTAATAc                                                                                                                                                     >  1:336391/1‑239 (MQ=255)
                                                      aTAAATTTCAACGATGAAAATGAATCCAAAGAGATTTATGACGAAAAATATAATAATAGCTACTATGCGACGGAAAAATTACTTAATAAAAACAATTTAGAAAATAAAATTATATTACCTCCTATTGATTTAGGTGCTGCCGTTATTGCTACAACATCCAATGCTTCTATTTCTGCGCCTTACCACAGAAATATAagag                                                                                                                                                                                             >  1:446569/1‑199 (MQ=255)
                                                                                     agaTTTATGACGAAAAATATAATAATAGCTACTATGCGACGGAAAAATTACTTAATAAAAACAATTTAGAAAATAAAATTATATTACCTCCTATTGATTTAGGTGCTGCCGTTATTGCTACAACATCCAATGCTTCTATTTCTGCGCCTTACCACAGAAATATAAGAGGAAATTCTGATACAATGCGGTTTTATACGTCAGTTAATACAGATGATGCAGAAAAATACTTGATTAAAAATAATGTGGATtat                                                                                                          >  1:527916/1‑251 (MQ=255)
                                                                                                                gCTACTATGCGACGGAAAAATTACTTAATAAAAACAATTTAGAAAATAAAATTATATTACCTCCTATTGATTTAGGTGCTGCCGTTATTGCTACAACATCCAATGCTTCTATTTCTGCGCCTTACCACAGAAATATAAGAGGAAATTc                                                                                                                                                                                      <  1:772459/148‑1 (MQ=255)
                                                                                                                                           ataaAAACAATTTAGAAAATAAAATTATATTACCTCCTATTGATTTAGGTGCTGCCGTTATTGCTACAACATCCAATGCTTCTATTTCTGCGCCTTACCACAGAAATATAAGAGGAAATTCTGATACAATGCGGTTTTATACGTCAGTTAATACAGATGATGCAGAAAACTACTTGATTAAAAATAATGTGGATTATATTCTGATTGAGAAAAATTTTGCCAATGTTTTAGCCGATAAATATAAGGGgaaa                                                    >  1:439739/1‑251 (MQ=255)
                                                                                                                                                                aaatTATATTACCTCCTATTGATTTAGGTGCTGCCGTTATTGCTACAACATCCAATGCTTCTATTTCTGCGCCTTACCACAGAAATATAAGAGGAAATTCTGATACAATGCGGTTTtat                                                                                                                                                                   >  1:660317/1‑119 (MQ=255)
                                                                                                                                                                  atTATATTACCTCCTATTGATTTAGGTGCTGCCGTTATTGCTACAACATCCAATGCTTCTATTTCTGCGCCTTACCACAGAAATATAAGAGGAAATTCTGATAc                                                                                                                                                                                <  1:751958/104‑1 (MQ=255)
                                                                                                                                                                     atatTACCTCCTATTGATTTAGGTGCTGCCGTTATTGCTACAACATCCAATGCTTCTATTTCTGCGCCTTACCACAGAAATATAAGAGGAAATTCTGATACAATGCGGTTTTATACGTCAGTTAATACAGATGATGCAGAAAAATACTTGATTAAAAATAATGTGGATTATATTCTGATTGAGAAAAATTTTGCCAATGTTTTAGCCGATAAATATAAggg                                                        <  1:139466/221‑1 (MQ=255)
                                                                                                                                                                          aCCTCCTATTGATTTAGGTGCTGCCGTTATTGCTACAACATCCAATGCTTCTATTTCTGCGCCTTACCACAGAAATATAAGAGGAAATTCTGATACAATGCGGTTTTATACGTCAGTTAATACAGATGATGCAGAAAAATACTTGATTAAAAATAATGTGGATTATATTCTGATTGAGAAAAATTTTGCCAATGTTTTAGCCGATAAATATAAggg                                                        <  1:556961/216‑1 (MQ=255)
                                                                                                                                                                              cctATTGATTTAGGTGCTGCCGTTATTGCTACAACATCCAATGCTTCTATTTCTGCGCCTTACCACAGAAATATAAGAGGAAATTCTGATACAATGCGGTTTTATAc                                                                                                                                                                 <  1:305872/107‑1 (MQ=255)
                                                                                                                                                                                tATTGATTTAGGTGCTGCCGTTATTGCTACAACATCCAATACTTCTATTTCTGCGCCTTACCACAGAAATATAAGAGGAAATTCTGATACAATGCGGTTTTATACGTCAGTTAATACAGATGATGCAGAAAAATACTTGATTAAAAATAATGTGGATTATATTCTGATTGAGAAAAATTTTGCCAATGTTTTAGCCGATAAATATAAGGGGAAAGAAATCATGGCTCAAAAATTAATAGATAAGAAAGata               >  1:273666/1‑251 (MQ=255)
                                                                                                                                                                                     aTTTAGGTGCTGCCGTTATTGCTACAACATCCAATGCTTCTATTTCTGCGCCTTACCACAGAAATATAAGAGGAAAATCTGATACAATGCGGTTTTATAc                                                                                                                                                                 <  1:230539/100‑1 (MQ=255)
                                                                                                                                                                                              ctgcCGTTATTGCTACAACATCCAATGCTTCTATTTCTGCGCCTTACCACAGAAATATAAGAGGAAATTCTGATACAATGCGGTTTTATACGTCAGTTAATACAGATGATGCAGAAAAATACTTGATTAAAAATAATGTGGATTATATTCTGATTGAGAAAAATTTTGCCAATGTTTTAGCCGATAAATATAAGGGGAAAGAAATCATGGCTCAAAAATTAATAGATAAGAAAGATATACCTGATTATCt  <  1:99260/250‑1 (MQ=255)
                                                                                                                                                                                                gcCGTTATTGCTACAACATCCAATGCTTCTATTTCTGCGCCTTACCACAGAAATATAAGAGGAAATTCTGATACAATGCGGTTTTATACGTCAGTTAATACAGATGATGCAGAAAAATACTTGATTAAAAATAATGTGGATTATATTCTGATTGAGAAAAATTTTGCCAATGTTTTAGCCGATAAATATAAGGGGAAAGAAATCATGGCTCAAAAATTAATAGATAAGAAAGATATAcc           <  1:546466/239‑1 (MQ=255)
                                                                                                                                                                                                   gTTATTGCTACAACATCCAATGCTTCTATTTCTGCGCCTTACCACAGAAATATAAGAGGAAATTCTGATACAATGCGGTTTTATACGTCAGTTAATACAGATGATGCAGAAAAATACTTGATTAAAAATAATGTGGATTATATTCTGa                                                                                                   >  1:139765/1‑148 (MQ=255)
                                                                                                                                                                                                     tATTGCTACAACATCCAATGCTTCTATTTCTGCGCCTTACCACAGAAATATAAGAGGAAATTCTGATACAATGCGGTTTTATACGTCAGTTAATAc                                                                                                                                                     >  1:790473/1‑96 (MQ=255)
                                                                                                                                                                                                            acaacaTCCAATGCTTCTATTTCTGCGCCTTACCACAGAAATATAAGAGGAAATTCTGATACAATGCGGTTTTATACGTCAGTTAATAc                                                                                                                                                     >  1:217194/1‑89 (MQ=255)
                                                                                                                                                                                                               acaTCCAATGCTTCTATTTCTGCGCCTTACCACAGAAATATAAGAGGAAATTCTGATACAATGCGGTTTTATACGTCAGTTAATACAGATGATGCAGAAAAATACt                                                                                                                                 >  1:197866/1‑106 (MQ=255)
                                                                                                                                                                                                                 aTCCAATGCTTCTATTTCTGCGCCTTACCACAGAAATATAAGAGGAAATTCTGATACAATGCGGTTTTATACGTCAGTTAATACAgat                                                                                                                                                 >  1:799875/1‑88 (MQ=255)
                                                                                                                                                                                                                        gCTTCTATTTCTGCGCCTTACCACAGAAATATAAGAGGAAATTCTGATACAATGCGGTTTTATACGTCAGTTAATACAGATGATGCAGAAAAATACTTGATTAAAaat                                                                                                                      >  1:721180/1‑108 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                        
ATCATTTTATTTTTATCAATACCTACATTTCTATTAATTTCAACTAAAATAATCATAAATTTCAACGATGAAAATGAATCCAAAGAGATTTATGACGAAAAATATAATAATAGCTACTATGCGACGAAAAAATTACTTAATAAAAACAATTTAGAAAATAAAATTATATTACCTCCTATTGATTTAGGTGCTGCCGTTATTGCTACAACATCCAATGCTTCTATTTCTGCGCCTTACCATAGAAATATAAGAGGAAATTCTGATACAATGCGGTTTTATACGTCAGTTAATACAGATGATGCAGAAAAATACTTGATTAGAAATAATGTGGATTATATTCTGATTGAGAAAAATTTTGCCAATGTTTTAGCCGATAAATATAAGGGGAAAGAAATCATGGCTCAAAAATTAATAGATAAGAAAGATATACCTGATTATCT  >  1/1648443‑1648882

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑