| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,643,257 | C→T | intergenic (+1418/+21118) | unknown → / ← unknown | tRNA‑Gly‑GCC/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,643,257 | 0 | C | T | 100.0% | 34.6 / NA | 15 | intergenic (+1418/+21118) | unknown/unknown | tRNA‑Gly‑GCC/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (6/9); total (6/9) | |||||||||||
ATATGACACTCTTGCCAGCAGATCAGGTGCAAGTGCAGATTTTCATTACTTCACGAAAAAAGGTGGATTTATTACCAATAATACCGATGATTTCAAATTACTGGATGAACTTAAAGTCAAATTTAAAGAGAAAAGTTATGCAAATAATACACGACTATTTGTCATTCATTTGATGGGATCTCATCGTAATTTTTGCCAGAGAATCACAAAAGATGAAAAGAAATACGAATTTATAAATGAAAGTTTATCCTGTTATGTCAATAGTATTTTAAAAACGGATAAATTAATTGAAGAGATCGTCTATTTATTAAAAGCACAGAATGAAAGTTATTCTTTAATTTATTTTTCAGATCATGGATTATCGCACAAAAATAAAGAAAGCAAAGAAGAAATAGATTTAGATTTTGGTG > 1/1643032‑1643441 | atatGACACTCTTGCCAGCAGATCAGGTGCAAGTGCAGATTTTCATTACTTCACGAAAAAAGGTGGATTTATTACCAATAATACCGATGATTTCAAATTACTGGATGAACTTAAAGTCAAATTTAAAGAGAAAAGTTATGCAAATAATACACGACTATTTGTCATTCATTTGATGGGATCTCATCGTAATTTTTGCCAGAGAATCACAAAAGATGAAAAGAAATATGAATTTATAAATGAAAGTTTATcc < 1:317422/250‑1 (MQ=255) acTCTTGCCAGCAGATCAGGTGCAAGTGCAGATTTTCATTACTTCACGAAAAAAGGTGGATTTATTACCAATAATACCGATGATTTCAAATTACTGGATGAACTTAAAGTCAAATTTAAAGAGAAAAGTTATGCAAATAATACACGACTATTTGTCATTCATTTGATGGGATCTCATCGTAATTTTTGCCAGAGAATCACAAAAGATGAAAAGAAATATGAATTTATAAAt > 1:384265/1‑231 (MQ=255) tctTGCCAGCAGATCAGGTGCAAGTGCAGATTTTCATTACTTCACGAAAAAAGGTGGATTTATTACCAATAATACCGATGATTTCAAATTACTGGATGAACTTAAAGTCAAATTTAAAGAGAAAAGTTATGCAAATAATACACGACTATTTGTCATTCATTTGATGGGATCTCATCGTAATTTTTGCCAGAGAATCACAAAAGATGAAAAGAAATATGAATTTATAAATGAAAGTTTATCCTGTTATGTCa < 1:58150/251‑1 (MQ=255) ccAGCAGATCAGGTGCAAGTGCAGATTTTCATTACTTCACGAAAAAAGGTGGATTTATTACCAATAATACCGATGATTTCAAATTACTGGATGAACTTAAAGTCAAATTTAAAGAGAAAAGTTATGCAAATAATACACGACTATTTGTGATTCATTTGATGGGATCTCATCGTAATTTTTGCCAGAGAATCACAAAAGATGAAAAGAAATATGAATTTATAAATGAAAGTTTATCCTGTTATGTCAATAg < 1:227393/250‑1 (MQ=255) ccAGCAGATCAGGTGCAAGTGCAGATTTTCATTACTTCACGAAAAAAGGTGGATTTATTACCAATAATACCGATGATTTCAAATTACTGGATGAACTTAAAGTCAAATTTAAAGAGAAAAGTTATGCAAATAATACACGACTATTTGTCATTCATTTGATGGGATCTCATCGTAATTTTTGCCAGAGAATCACAAAAGATGAAAAGAAATATGAATTTATAAATGAAAGTTTATCCTGTTATGTCAATAg < 1:42767/250‑1 (MQ=255) gATCAGGTGCAAGTGCAGATTTTCATTACTTCACGAAAAAAGGTGGATTTATTACCAATAATACCGATGATTTCAAATTACTGGATGAACTTAAAGTCAAATTTAAAGAGAAAAGTTATGCAAATAATACACGACTATTTGTCATTCATTTGATGGGATCTCATCGTAATTTTTGCCAGAGAATCACAAAAGATGAAAAGAAATATGaa > 1:872107/1‑209 (MQ=255) tCAGGTGCAAGTGCAGATTTTCATTACTTCACGAAAAAAGGTGGATTTATTACCAATAATACCGATGATTTCAAATTACTGGATGAACTTAAAGTCAAATTTAAAGAGAAAAGTTATGCAAATAATACACGACTATTTGTCATTCATTTGATGGGATCTCATCGTAATTTTTGCCAGAGAATCACAAAAGATGAAAAGAAATATGAATTTATAAATGAAAGTTTATcc < 1:517130/228‑1 (MQ=255) gATTTTCATTACTTCACGAAAAAAGGTGGATTTATTACCAATAATACCGATGATTTCAAATTACTGGATGAACTTAAAGTCAAATTTAAAGAGAAAAGTTATGCAAATAATACACGACTATTTGTCATTCATTTGATGGGATCTCATCGTAATTTTTGCCAGAGAATCACAAAAGATGAAAAGAAATATGAATTTATAAATGAAAGTTTATCCTGTTATGTCa < 1:520878/223‑1 (MQ=255) gATTTTCATTACTTCACGAAAAAAGGTGGATTTATTACCAATAATACCGATGATTTCAAATTACTGGATGAACTTAAAGTCAAATTTAAAGAGAAAAGTTATGCAAATAATACACGACTATTTGTCATTCATTTGATGGGATCTCATCGTAATTTTTGCCAGAGAATCACAAAAGATGAAAAGAAATATGAATTTATAAATGAAAGTTTATCCTGTTATGTCAAt < 1:757416/225‑1 (MQ=255) aCCAATAATACCGATGATTTCAAATTACTGGATGAACTTAAAGTCAAATTTAAAGAGAAAAGTTATGCAAATAATACACGACTATTTGTCATTCATTTGATGGGATCTCATCGTAATTTTTGCCAGAGAATCACAAAAGATGAAAAGAAATATGAATTTATAAATGAAAGTTTATCCTGTTATGTCa < 1:160083/187‑1 (MQ=255) aCTGGATGAACTTAAAGTCAAATTTAAAGAGAAAAGTTATGCAAATAATACACGACTATTTGTCATTCATTTGATGGGATCTCATCGTAATTTTTGCCAGAGAATCACAAAAGATGAAAAGAAATATGAATTTATAAATGAAAGTTTATCCTGTTATGTCa < 1:134386/161‑1 (MQ=255) aaGTTATGCAAATAATACACGACTATTTGTCATTCATTTGATGGGATCTCATCGTAATTTTTGCCAGAGAATCACAAAAGATGAAAAGAAATATGAATTTATAAATGAAAGTTTATCCTGTTATGTCAATAGTATTTTAAAAACGGATAAATTAATTGAAGAGATCGTCTATTTATTAAAAGc > 1:554634/1‑183 (MQ=255) aaaTAATACACGACTATTTGTCATTCATTTGATGGGATCTCATCGTAATTTTTGCCAGAGAATCACAAAAGATGAAAAGAAATATGAATTTATAAATGAAAGTTTATCCTGTTATGTCAATAGTATTTTAAAAACGGATAAATTAATTGAAGAGATCGTCTATTTATTAAAAGCACAGAATGAAAGTTATTCTTTAATTTATTTTTCAGATCATGGATTAt > 1:900223/1‑221 (MQ=255) gATGGGATCTCATCGTAATTTTTGCCAGAGAATCACAAAAGATGAAAAGAAATATGAATTTATAAATGAAAGTTTATCCTGTTATGTCAATAGTATTTTAAAAACGGATAAATTAATTGAAGAGCTCGTCTATTTATTAAAAGCACAGAATGAAAGTTATTCTTTAATTTATTTTTCAGATCATGGATTATCGCACAAAAATAAAGAAAGCAAAGAAGGAATAGATTTAGATTTTGGTg > 1:19167/1‑239 (MQ=255) aTCTCATCGTAATTTTTGCCAGAGAATCACAAAAGATGAAAAGAAATATGAATTTATAAATGAAAGTTTATCCTGTTa > 1:226543/1‑78 (MQ=255) | ATATGACACTCTTGCCAGCAGATCAGGTGCAAGTGCAGATTTTCATTACTTCACGAAAAAAGGTGGATTTATTACCAATAATACCGATGATTTCAAATTACTGGATGAACTTAAAGTCAAATTTAAAGAGAAAAGTTATGCAAATAATACACGACTATTTGTCATTCATTTGATGGGATCTCATCGTAATTTTTGCCAGAGAATCACAAAAGATGAAAAGAAATACGAATTTATAAATGAAAGTTTATCCTGTTATGTCAATAGTATTTTAAAAACGGATAAATTAATTGAAGAGATCGTCTATTTATTAAAAGCACAGAATGAAAGTTATTCTTTAATTTATTTTTCAGATCATGGATTATCGCACAAAAATAAAGAAAGCAAAGAAGAAATAGATTTAGATTTTGGTG > 1/1643032‑1643441 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |