| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 348,983 | G→T | intergenic (‑4060/+62893) | unknown ← / ← unknown | tRNA‑Ser‑GCT/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 348,983 | 0 | G | T | 100.0% | 210.2 / NA | 77 | intergenic (‑4060/+62893) | unknown/unknown | tRNA‑Ser‑GCT/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (38/39); total (38/39) | |||||||||||
CTCCGATAACATTCCGGGCGTGGCGGGCGTGGGCGAAAAAACTGCCCTTGGGCTTTTGCAGGGCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGCCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCGCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAATGCCGTTAAATTTCACATTGATCGCAGCCGTTATGAAAACATTCTCACCGAGGCGGATTTGGCG > 1/348745‑349228 | cTCCGATAACATTCCGGGCGTGGCGGGCGTGGGCAAAAAAACTGCCCTTGGGCTTTTGCAGGGCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCgg < 1:885770/246‑1 (MQ=255) aTAACATTCCGGGCGTGGCGGGCGTGGGCAAAAAAACTGCCCTTGGGCTTTTGCAGGGCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGAt > 1:207887/1‑251 (MQ=255) aaCATTCCGGGGGTGGCGGGCGTGGGCAAAAAAACTGCCCTTGGGCTTTTGCAGGGCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATaa < 1:793249/251‑1 (MQ=255) aaCATTCCGGGCGTGGCGGGCGTGGGCAAAAAAACTGCCCTTGGGCTTTTGCAGGGCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATaa < 1:770638/251‑1 (MQ=255) aaCATTCCGGGCGTGGCGGGCGTGGGCAAAAAAACTGCCCTTGGGCTTTTGCAGGGCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATaa < 1:727235/251‑1 (MQ=255) aCATTCCGGGCGTGGCGGGCGTGGGCAAAAAAACTGCCCTTGGGCTTTTGCAGGGCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAac < 1:21480/251‑1 (MQ=255) cATTCCGGGCGTGGCGGGCGTGGGCAAAAAAACTGCCCTTGGGCTTTTGCAGGGCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAacg > 1:644461/1‑251 (MQ=255) tggcgggcgtagGCAAAAAAACTGCCCTTGGGCTTTTGCAGGGCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAATCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCCCCGAAAAAGCCCTGGCGGATTTATCTTACGCGCCGGCAACCATTAAAA‑CTGATGTGATGCCAGAATTTTTGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAAt > 1:170366/1‑250 (MQ=255) cgtggGCAAAAAAACTGCCCTTGGGCTTTTGCAGGGCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTAt < 1:620573/250‑1 (MQ=255) ggcaaaaaaaCTGCCCTTGGGCTTTTGCAGGGCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGAc < 1:644174/215‑1 (MQ=255) aaaCTGCCCTTGGGCTTTTGCAGGGCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAAt < 1:71047/232‑1 (MQ=255) gCCCTTGGGCTTTTGCAGGGCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAAtt > 1:55351/1‑251 (MQ=255) gCCCTTGGGCTTTTGCAGGGCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAAtt > 1:654944/1‑251 (MQ=255) cccTTGGGCTTTTGCAGGGCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAAtt < 1:516696/250‑1 (MQ=255) cccTTGGGCTTTTGCAGGGCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAAtt < 1:166139/250‑1 (MQ=255) ggCTTTTGCAGGGCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACg > 1:43206/1‑250 (MQ=255) tttGCAGGGCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCCTGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCggg > 1:683536/1‑229 (MQ=255) ttGCAGGGCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGTCAGCGATAACGACCCCTTAATAGCGTATTTCGGGCGTTATGCATTTAAACg > 1:25102/1‑245 (MQ=255) gCAGGGCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTc > 1:787675/1‑223 (MQ=255) gggCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAgggg > 1:804730/1‑251 (MQ=255) ggCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAgggg < 1:845696/250‑1 (MQ=255) ggCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAgggg < 1:121224/250‑1 (MQ=255) ggCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAgggg < 1:480142/250‑1 (MQ=255) cGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCt > 1:84778/1‑200 (MQ=255) cGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGtga > 1:504787/1‑251 (MQ=255) cGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGtga < 1:552130/251‑1 (MQ=255) cagcaTGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAgggg > 1:8716/1‑242 (MQ=255) cagcaTGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGtgatg < 1:488354/250‑1 (MQ=255) caTGGCGCAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAAt < 1:419553/250‑1 (MQ=255) gcgcAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAACCTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCtt < 1:610690/192‑1 (MQ=255) cgcAAATTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGgcgc < 1:568814/250‑1 (MQ=255) aaaTTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGt < 1:592005/251‑1 (MQ=255) aaTTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTa > 1:185276/1‑251 (MQ=255) aaTTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTa < 1:219030/251‑1 (MQ=255) aTTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTa > 1:58550/1‑250 (MQ=255) aTTTATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTAc < 1:485073/251‑1 (MQ=255) tATGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGt < 1:613005/251‑1 (MQ=255) tGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCa < 1:243322/251‑1 (MQ=255) tGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCa < 1:562391/251‑1 (MQ=255) tGCCAATCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCa < 1:290403/251‑1 (MQ=255) aaTCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAgggg > 1:748952/1‑220 (MQ=255) aTCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCaa < 1:162539/251‑1 (MQ=255) aTCTGGACAAAGTCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCaa < 1:679295/251‑1 (MQ=255) aagtcgccgAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAg > 1:900488/5‑251 (MQ=255) gCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTaaaaa > 1:639319/1‑251 (MQ=255) ccGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAAt < 1:413667/251‑1 (MQ=255) aaaGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCa < 1:10842/251‑1 (MQ=255) aaaGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCa < 1:830485/251‑1 (MQ=255) cGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATg < 1:865807/251‑1 (MQ=255) gAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGCCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAg > 1:258676/1‑251 (MQ=255) gATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAATg > 1:796914/1‑250 (MQ=255) aTCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGaa < 1:50496/241‑1 (MQ=255) aTCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAAt > 1:572813/1‑244 (MQ=255) cTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAATGCCGTTaaa > 1:227546/1‑251 (MQ=255) cTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAATGCCGTTAAATTTCACAt < 1:541624/251‑1 (MQ=255) cTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAATGCCGTTAAATTTCACAt > 1:869068/1‑251 (MQ=255) ccATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAATGCCGTTAAATTTCACATTGATCg > 1:750013/1‑250 (MQ=255) ccATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAATGCCGTTAAATTTCACATTGATCg > 1:697885/1‑250 (MQ=255) cATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAgggg < 1:316821/116‑1 (MQ=255) cATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCaa > 1:361186/1‑148 (MQ=255) cATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAAcc < 1:838075/176‑1 (MQ=255) cATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAATGCCGTTAAATTTCACATTGATCGCa > 1:343363/1‑251 (MQ=255) cATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAATGCCGTTAAATTTCACATTGATCGCa > 1:61342/1‑251 (MQ=255) cATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAATGCCGTTAAATTTCACATTGATCGCa > 1:600266/1‑251 (MQ=255) cATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAATGCCGTTAAATTTCACATTGATCGCa > 1:469428/1‑251 (MQ=255) cATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAATGCCGTTAAATTTCACATTGATCGCa > 1:530708/1‑251 (MQ=255) aTTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGCGATGAATGGCGCCGGTACTGTCACGCaa > 1:135983/1‑147 (MQ=255) ttAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAATGCCGTTAAATTTCACATTGATCGCAGc < 1:30485/251‑1 (MQ=255) aTTTTCGCCTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGTAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAATGCCGTTAAATTTCACATTGATCGCAGCCGTTATGAAAACATTCTCACCg > 1:780571/1‑251 (MQ=255) cTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAATGCCGTTAAATTTCACATTGATCGCAGCCGTTATGAAAACATTCTCACCGAGGCGGAt > 1:22711/1‑251 (MQ=255) cTCATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAATGCCGTTAAATTTCACATTGATCGCAGCCGTTATGAAAACATTCTCACCGAGGCGGAt > 1:36880/1‑251 (MQ=255) cATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGaa < 1:15726/92‑1 (MQ=255) cATGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAATGCCGTTAAATTTCACATTGATCGCAGCCGTTATGAAAACATTCTCACCGAGGCGGAttt > 1:344269/1‑251 (MQ=255) tGAACTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAATGCCGTTAAATTTCACATTGATCGCAGCCGTTATGAAAACATTCTCACCGAGGCGGATTTgg > 1:682469/1‑251 (MQ=255) aaCTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAATGCCGTTAAATTTCACATTGATCGCAGCCGTTATGAAAACATTCTCACCGAGGCGGATTTGgcg < 1:242046/251‑1 (MQ=255) aaCTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACGGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAATGCCGTTAAATTTCACATTGATCGCAGCCGTTATGAAAACATTCTCACCGAGGCGGATTTGgcg < 1:540929/251‑1 (MQ=255) aCTCTCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAATGCCGTTAAATTTCACATTGATCGCAGCCGTTATGAAAACATTCTCACCGAGGCGGATTTGgcg > 1:461848/1‑250 (MQ=255) | CTCCGATAACATTCCGGGCGTGGCGGGCGTGGGCGAAAAAACTGCCCTTGGGCTTTTGCAGGGCATCGGCAGCATGGCGCAAATTTATGCCAATCTGGACAAAGCCGCCGAACTGCCGATTCGTGGCGCGAAAAAGCTGGGCAAAAAATTACTCGCCGAAAAAGCCATGGCGGATTTATCTTACGCGCTGGCAACCATTAAAA‑CTGATGTGATGCTAGAATTTTCGCCTCATGAACTCGCCATCGGCGACAGCGATAACGACGCCTTAATCGCGTATTTCGGGCGTTATGAATTTAAACGCTGGCTAGGGGAGGTGATGAATGGCGCCGGTACTGTCACGCAAAGCGCCGAGCAACCCGTAAAAATTAACCACTACCAAGCCACGCCTGCAGCAAAAATCGATGAAAGTGCGGTCGAAAATGCCGTTAAATTTCACATTGATCGCAGCCGTTATGAAAACATTCTCACCGAGGCGGATTTGGCG > 1/348745‑349228 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |