Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,641,533 G→A intergenic (‑196905/‑231) unknown ← / → unknown tRNA‑Met‑CAT/tRNA‑Gly‑GCC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,641,5330GA100.0% 162.9 / NA 60intergenic (‑196905/‑231)unknown/unknowntRNA‑Met‑CAT/tRNA‑Gly‑GCC
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (28/32);  total (28/32)

AGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATCGAACGTGTTAAAGCCAGCAAACTCACCAAACGCGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAGCTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACAAGCGCGTAATTTCCACGATTTTATACTTGCACTGCACAAAAATATTCGTATAATGCCGTCTCATTCGTTTTATGTGAACGCGGGAATAG  >  1/1641291‑1641773
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                
aGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTgccg                                                                                                                                                                                                                                           >  1:861157/1‑250 (MQ=255)
         tgtgtAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGgag                                                                                                                                                                                                                                 <  1:725676/251‑1 (MQ=255)
            gtAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGACAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCACCGATTATTGGCAACAGCGTTGCGCAGGACAAACGCTTCATGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGAc                                                                                                                                                                                                                               >  1:581793/1‑250 (MQ=255)
                 aaCCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACa                                                                                                                                                                                                                         <  1:376669/251‑1 (MQ=255)
                   cccACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACAtt                                                                                                                                                                                                                       >  1:524982/1‑251 (MQ=255)
                         cGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAAc                                                                                                                                                                                                                 <  1:831113/251‑1 (MQ=255)
                                  gCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGAc                                                                                                                                                                                                                               <  1:214267/228‑1 (MQ=255)
                                  gCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTtaat                                                                                                                                                                                                        >  1:152943/1‑251 (MQ=255)
                                   cTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTtaata                                                                                                                                                                                                       <  1:508818/251‑1 (MQ=255)
                                   cTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTtaata                                                                                                                                                                                                       <  1:765067/251‑1 (MQ=255)
                                   cTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTtaata                                                                                                                                                                                                       <  1:642510/251‑1 (MQ=255)
                                              gtgtTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACg                                                                                                                                                                                            >  1:174412/1‑251 (MQ=255)
                                                          gCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGgcg                                                                                                                                                                                   >  1:694618/1‑248 (MQ=255)
                                                               cTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGa                                                                                                                                                                           >  1:142912/1‑251 (MQ=255)
                                                                            cgGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAAt                                                                                                                                                                >  1:587307/1‑249 (MQ=255)
                                                                                   gCTACAAACACTTGATTTCTTGAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAag                                                                                                                                                       >  1:238802/1‑251 (MQ=255)
                                                                                   gCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTaaa                                                                                                                                                                                                                  <  1:8097/192‑1 (MQ=255)
                                                                                     tACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAagag                                                                                                                                                     <  1:308379/251‑1 (MQ=255)
                                                                                     tACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAagag                                                                                                                                                     <  1:438326/251‑1 (MQ=255)
                                                                                      aCAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGt                                                                                                                                                    <  1:630996/251‑1 (MQ=255)
                                                                                                 aTTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCtattat                                                                                                                                         <  1:340977/251‑1 (MQ=255)
                                                                                                 aTTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCtattat                                                                                                                                         <  1:294618/251‑1 (MQ=255)
                                                                                                 aTTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCtattat                                                                                                                                         <  1:563710/251‑1 (MQ=255)
                                                                                                         aaaaaaTACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACa                                                                                                                                 >  1:900154/1‑251 (MQ=255)
                                                                                                                aCGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTg                                                                                                                          <  1:772836/251‑1 (MQ=255)
                                                                                                                   ttCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCtattat                                                                                                                                         >  1:337159/1‑233 (MQ=255)
                                                                                                                              gcCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAAt                                                                                                            >  1:553210/1‑251 (MQ=255)
                                                                                                                                  ccccGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAag                                                                                                                                                       <  1:671993/204‑1 (MQ=255)
                                                                                                                                               cAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGATGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACa                                                                                           <  1:442442/251‑1 (MQ=255)
                                                                                                                                               cAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAAc                                                                                            <  1:715750/250‑1 (MQ=255)
                                                                                                                                               cAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACa                                                                                           <  1:15057/251‑1 (MQ=255)
                                                                                                                                                    gCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCg                                                                                                                                       >  1:405993/1‑202 (MQ=255)
                                                                                                                                                    gCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACAAgcg                                                                                       >  1:553406/1‑250 (MQ=255)
                                                                                                                                                         gcgcAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCtatta                                                                                                                                          >  1:191713/1‑194 (MQ=255)
                                                                                                                                                         gcgcAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACAAGCGCGTAAt                                                                                 >  1:739000/1‑251 (MQ=255)
                                                                                                                                                              ggACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAAtc                                                                                                           <  1:493563/220‑1 (MQ=255)
                                                                                                                                                              ggACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACAAGCGCGTAATTTCCa                                                                            >  1:180723/1‑251 (MQ=255)
                                                                                                                                                                       cTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACAAGCGCGTAATTTCCACGATTTtat                                                                   >  1:405479/1‑251 (MQ=255)
                                                                                                                                                                       cTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACAAGCGCGTAATTTCCACGATTTtat                                                                   <  1:801227/251‑1 (MQ=255)
                                                                                                                                                                             gTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGAcc                                                                                                                                                                                                                              <  1:205660/90‑1 (MQ=255)
                                                                                                                                                                             gTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTg                                                                                                                                     <  1:501638/179‑1 (MQ=255)
                                                                                                                                                                             gTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACa                                                                                           <  1:531661/221‑1 (MQ=255)
                                                                                                                                                                             gTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACAAGCGCGTAATTTCCACGAt                                                                        <  1:31277/240‑1 (MQ=255)
                                                                                                                                                                             gTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACAAGCGCGTAATTTCCACGAt                                                                        >  1:437217/1‑240 (MQ=255)
                                                                                                                                                                             gTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACAAGCGCGTAATTTCCACGATTTTATACTtg                                                              >  1:834523/1‑250 (MQ=255)
                                                                                                                                                                                   aTACATGCCTGAACTTGCCGACTATTGTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTaa                                                                                                              <  1:425688/196‑1 (MQ=255)
                                                                                                                                                                                        tGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGAc                                                                                                                                                                                                                               >  1:811310/1‑78 (MQ=255)
                                                                                                                                                                                        tGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACAAGCGCGTAATTTCCACGATTTTATACTTGCACTGCACaaaa                                                  >  1:22736/1‑251 (MQ=255)
                                                                                                                                                                                          ccTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACAAGCGCGTAATTTCCACGATTTTATACTTGCACTGCACAAAAat                                                <  1:593461/251‑1 (MQ=255)
                                                                                                                                                                                                   gCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACAAGCGCGTAATTTCCACGATTTTATACTTGCACTGCACaaaaa                                                 <  1:873773/241‑1 (MQ=255)
                                                                                                                                                                                                       aCTATTTTCATTATCGCTACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACAAGCGCGTAATTTCCACGATTTTATACTTGCACTGCACAAAAATATTCGTATAATg                                    >  1:44989/1‑250 (MQ=255)
                                                                                                                                                                                                       aCTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACAAGCGCGTAATTTCCACGATTTTATACTTGCACTGCACaaaaa                                                 >  1:129522/1‑237 (MQ=255)
                                                                                                                                                                                                       aCTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACAAGCGCGTAATTTCCACGATTTTATACTTGCACTGCACAAAAATATTCGTATAATGc                                   <  1:464831/251‑1 (MQ=255)
                                                                                                                                                                                                        cTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACAAGCGCGTAATTTCCACGATTTTATACTtgcac                                                           <  1:148358/226‑1 (MQ=255)
                                                                                                                                                                                                        cTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACAAGCGCGTAATTTCCACGATTTTATACTTGCACTGCACAAAAATATTCGTATAATGc                                   >  1:867970/1‑250 (MQ=255)
                                                                                                                                                                                                                         aCCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACAAGCGCGTAATTTCCACGATTTTATACTTGCACTGCACAAAAATATTCGTATAATGCCGTCTCATTCGTTTTAtg                 >  1:211203/1‑251 (MQ=255)
                                                                                                                                                                                                                              gACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACAAGCGCGTAATTTCCACGATTGTATACTTGCACTGCACAAAAATATTCGTATAATGc                                   <  1:614393/228‑1 (MQ=255)
                                                                                                                                                                                                                                      cACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACAAGCGCGTAATTTCCACGATTTTATACTTGCACTGCACAAAAATATTCGTATAATGCCGTCTCATTCGTTTTATGTGAACGCGGGa      <  1:423280/249‑1 (MQ=255)
                                                                                                                                                                                                                                          ttAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACAAGCGCGTAATTTCCACGATTTTATACTTGCACTGCACAAAAATATTCGTATAATGCCGTCTCATTCGTTTTATGTGAACGCGGGAATAg  >  1:337897/1‑249 (MQ=255)
                                                                                                                                                                                                                                           tAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAagag                                                                                                                                                     >  1:876258/1‑101 (MQ=255)
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                
AGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATCGAACGTGTTAAAGCCAGCAAACTCACCAAACGCGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAGCTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATAAGCAAAATACGCATTTGGCGCTGGACGATATTCGTGAATCTATCAAAGAGTTAGCCTATTATCGTGAACATTTTTTGAAGATGGACTAAATCGTCGAATATATAAACAAGCGCGTAATTTCCACGATTTTATACTTGCACTGCACAAAAATATTCGTATAATGCCGTCTCATTCGTTTTATGTGAACGCGGGAATAG  >  1/1641291‑1641773

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑