Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,641,332 C→A intergenic (‑196704/‑432) unknown ← / → unknown tRNA‑Met‑CAT/tRNA‑Gly‑GCC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,641,3320CA100.0% 180.6 / NA 66intergenic (‑196704/‑432)unknown/unknowntRNA‑Met‑CAT/tRNA‑Gly‑GCC
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (34/32);  total (34/32)

GCATAGGATACCTTATATCATGTCATTCGATAAACAAAATCTGATTTGGATTGATTTAGAAATGACCGGACTTGATCCGGAAAAAGAACGTATTATTGAAATCGCCACCATCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATCGAACGTGTTAAAGCCAGCAAACTCACCAAACGCGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAGCTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATA  >  1/1641098‑1641576
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                    
gCATAGGATACCTTATATCATGTCATTCGATAAACAAAATCTGATTTGGATTGATTTAGAAATGACCGGACTTGATCCGGAAAAAGAACGTATTATTGAAATCGCCACCATCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAg                                                                                                                                                                                                                                         >  1:220065/1‑248 (MQ=255)
   tAGGATACCTTATATCATGTCATTCGATAAACAAAATCTGATTTGGATTGATTTAGAAATGACCGGACTTGATCCGGAAAAAGAACGTATTATTGAAATCGCCACCATCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCa                                                                                                                                                                                                                                   >  1:145347/1‑251 (MQ=255)
     ggATACCTTATATCATGTCATTCGATAAACAAAATCTGATTTGGATTGATTTAGAAATGACCGGACTTGATCCGGAAAAAGAACGTATTATTGAAATCGCCACCATCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCaaa                                                                                                                                                                                                                                 >  1:656916/1‑251 (MQ=255)
     ggATACCTTATATCATGTCATTCGATAAACAAAATCTGATTTGGATTGATTTAGAAATGACCGGACTTGATCCGGAAAAAGAACGTATTATTGAAATCGCCACCATCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCaaa                                                                                                                                                                                                                                 >  1:365398/1‑251 (MQ=255)
     ggATACCTTATATCATGTCATTCGATAAACAAAATCTGATTTGGATTGATTTAGAAATGACCGGACTTGATCCGGAAAAAGAACGTATTATTGAAATCGCCACCATCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCaaa                                                                                                                                                                                                                                 >  1:378744/1‑251 (MQ=255)
     ggATACCTTATATCATGTCATTCGATAAACAAAATCTGATTTGGATTGATTTAGAAATGACCGGACTTGATCCGGAAAAAGAACGTATTATTGAAATCGCCACCATCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCaaa                                                                                                                                                                                                                                 >  1:491309/1‑251 (MQ=255)
         aCCTTATATCATGTCATTCGATAAACAAAATCTGATTTGGATTGATTTAGAAATGACCGGACTTGATCCGGAAAAAGAACGTATTATTGAAATCGCCACCATCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGcc                                                                                                                                                                                                                                       >  1:57614/1‑241 (MQ=255)
         aCCTTATATCATGTCATTCGATAAACAAAATCTGATTTGGATTGATTTAGAAATGACCGGACTTGATCCGGAAAAAGAACGTATTATTGAAATCGCCACCATCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGcc                                                                                                                                                                                                                                       >  1:47938/1‑241 (MQ=255)
         aCCTTATATCATGTCATTCGATAAACAAAATCTGATTTGGATTGATTTAGAAATGACCGGACTTGATCCGGAAAAAGAACGTATTATTGAAATCGCCACCATCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGcc                                                                                                                                                                                                                                       <  1:268738/241‑1 (MQ=255)
         aCCTTATATCATGTCATTCGATAAACAAAATCTGATTTGGATTGATTTAGAAATGACCGGACTTGATCCGGAAAAAGAACGTATTATTGAAATCGCCACCATCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCa                                                                                                                                                                                                                             >  1:535610/1‑251 (MQ=255)
          ccTTATATCATGTCATTCGATAAACAAAATCTGATTTGGATTGATTTAGAAATGACCGGACTTGATCCGGAAAAAGAACGTATTATTGAAATCGCCACCATCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAAc                                                                                                                                                                                                                                <  1:56196/247‑1 (MQ=255)
          ccTTATATCATGTCATTCGATAAACAAAATCTGATTTGGATTGATTTAGAAATGACCGGACTTGATCCGGAAAAAGAACGTATTATTGAAATCGCCACCATCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCa                                                                                                                                                                                                                             >  1:747742/1‑250 (MQ=255)
                                aaCAAAATCTGATTTGGATTGATTTAGAAATGACCGGACTTGATCCGGAAAAAGAACGTATTATTGAAATCGCCACCATCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACaa                                                                                                                                                                                                      >  1:618053/1‑251 (MQ=255)
                                                    gattTAGAAATGACCGGACTTGATCCGGAAAAAGAACGTATTATTGAAATCGCCACCATCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCAcc                                                                                                                                                                                                                           <  1:746607/210‑1 (MQ=255)
                                                    gattTAGAAATGACCGGACTTGATCCGGAAAAAGAACGTATTATTGAAATCGCCACCATCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAAca                                                                                                                                                                                                                      <  1:315211/215‑2 (MQ=255)
                                                     attTAGAAATGACCGGACTTGATCCGGAAAAAGAACGTATTATTGAAATCGCCACCATCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTaaaaaaa                                                                                                                                                                                 >  1:686842/1‑251 (MQ=255)
                                                                    gACTTGATCCGGAAAAAGAACGTATTATTGAAATCGCCACCATCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAacac                                                                                                                                                                                                  <  1:125199/219‑1 (MQ=255)
                                                                           tCCGGAAAAAGAACGTATTATTGAAATCGCCACCATCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTccc                                                                                                                                                           <  1:25458/251‑1 (MQ=255)
                                                                                         gTATTATTGAAATCGCCACCATCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACaa                                                                                                                                                                                                      >  1:797930/1‑194 (MQ=255)
                                                                                              attGAAATCGCCACCATCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGt                                                                                                                                        >  1:152007/1‑251 (MQ=255)
                                                                                                             aTCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGc                                                                                                                                                                                                                >  1:86689/1‑164 (MQ=255)
                                                                                                                   aCCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTcc                                                                                                                    <  1:897832/250‑1 (MQ=255)
                                                                                                                            aaTTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGAc                                                                                                                              <  1:565831/231‑1 (MQ=255)
                                                                                                                                      tCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATAc                                                                                                                                                                              >  1:899330/1‑173 (MQ=255)
                                                                                                                                      tCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATAc                                                                                                         <  1:528348/242‑1 (MQ=255)
                                                                                                                                       ccTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAAc                                                                                               <  1:294957/251‑1 (MQ=255)
                                                                                                                                       ccTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAAc                                                                                               <  1:476582/251‑1 (MQ=255)
                                                                                                                                                 ggCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGAc                                                                                       <  1:502158/249‑1 (MQ=255)
                                                                                                                                                  gCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTAt                                                                                    >  1:872821/1‑251 (MQ=255)
                                                                                                                                                       gTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATa                                                                                                          <  1:385488/224‑1 (MQ=255)
                                                                                                                                                       gTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCa                                                                               >  1:224430/1‑251 (MQ=255)
                                                                                                                                                       gTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCa                                                                               >  1:555174/1‑251 (MQ=255)
                                                                                                                                                        tCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCAt                                                                              <  1:692680/251‑1 (MQ=255)
                                                                                                                                                         ccTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTGAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATAc                                                                                                         >  1:152308/1‑223 (MQ=255)
                                                                                                                                                             gCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGAc                                                                                                                              >  1:802318/1‑198 (MQ=255)
                                                                                                                                                                  tCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGcc                                                                                                    <  1:71400/219‑1 (MQ=255)
                                                                                                                                                                   cGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGc                                                                                                                        <  1:1522/198‑1 (MQ=255)
                                                                                                                                                                       aGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGa                                                                >  1:416311/1‑250 (MQ=255)
                                                                                                                                                                             aTGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAg                                                          >  1:409812/1‑250 (MQ=255)
                                                                                                                                                                             aTGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTT‑AAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCa                                                        >  1:462817/1‑251 (MQ=255)
                                                                                                                                                                                    aCTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCTATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATAc                                                                                                         <  1:207043/196‑1 (MQ=255)
                                                                                                                                                                                       gAATAAAATGAGTGAATGGTGTGTAAAAACCTACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGc                                                                                                                                                                                                                <  1:573845/90‑1 (MQ=255)
                                                                                                                                                                                       gAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGtt                                                                                                                <  1:604020/186‑1 (MQ=255)
                                                                                                                                                                                       gAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTAttt                                                                                  >  1:333713/1‑216 (MQ=255)
                                                                                                                                                                                        aaTAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAag                                               <  1:498885/250‑1 (MQ=255)
                                                                                                                                                                                          tAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAagaa                                             >  1:130714/1‑249 (MQ=255)
                                                                                                                                                                                                gAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAag                                               <  1:742238/242‑1 (MQ=255)
                                                                                                                                                                                                 aGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTgccg                                      >  1:861157/1‑250 (MQ=255)
                                                                                                                                                                                                  gTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAg                                                                                                                                                                                                                                         >  1:85974/1‑54 (MQ=255)
                                                                                                                                                                                                  gTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGc                                                                                                                                                >  1:618067/1‑143 (MQ=255)
                                                                                                                                                                                                   tGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGc                                                                                                                        <  1:754993/166‑1 (MQ=255)
                                                                                                                                                                                                         gtgtgtAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATAc                                                                                                         <  1:186478/175‑1 (MQ=255)
                                                                                                                                                                                                          tgtgtAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGgag                            <  1:725676/251‑1 (MQ=255)
                                                                                                                                                                                                           gtgtAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAag                                               >  1:213179/1‑231 (MQ=255)
                                                                                                                                                                                                             gtAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATa                                                                                                          <  1:291036/170‑1 (MQ=255)
                                                                                                                                                                                                             gtAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAAc                                                                                               <  1:420349/181‑1 (MQ=255)
                                                                                                                                                                                                             gtAAAAACCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGACAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCACCGATTATTGGCAACAGCGTTGCGCAGGACAAACGCTTCATGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGAc                          >  1:581793/1‑250 (MQ=255)
                                                                                                                                                                                                                aaaaCCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCAtt                                                                             >  1:342652/1‑196 (MQ=255)
                                                                                                                                                                                                                  aaCCCACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACa                    <  1:376669/251‑1 (MQ=255)
                                                                                                                                                                                                                    cccACACGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACAtt                  >  1:524982/1‑251 (MQ=255)
                                                                                                                                                                                                                          cGGCAAACGGCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAAc            <  1:831113/251‑1 (MQ=255)
                                                                                                                                                                                                                                   gCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGAc                          <  1:214267/228‑1 (MQ=255)
                                                                                                                                                                                                                                   gCTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTtaat   >  1:152943/1‑251 (MQ=255)
                                                                                                                                                                                                                                    cTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTtaata  <  1:765067/251‑1 (MQ=255)
                                                                                                                                                                                                                                    cTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTtaata  <  1:508818/251‑1 (MQ=255)
                                                                                                                                                                                                                                    cTTGATAGAACGTGTTAAAGCCAGCAAACTCACCAAACACGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAACTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTtaata  <  1:642510/251‑1 (MQ=255)
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                    
GCATAGGATACCTTATATCATGTCATTCGATAAACAAAATCTGATTTGGATTGATTTAGAAATGACCGGACTTGATCCGGAAAAAGAACGTATTATTGAAATCGCCACCATCGTGACCGATAAAAATTTAAACATCCTTGCCGAGGGCCCTGTCCTTGCTATTCGCCAGCCCGATGCGTTACTGAATAAAATGAGTGAATGGTGTGTAAAAACCCACACGGCAAACGGCTTGATCGAACGTGTTAAAGCCAGCAAACTCACCAAACGCGCGGCAGAGCTACAAACACTTGATTTCTTAAAAAAATACGTTCCGAAAGGCGCCTCCCCGATTTGTGGCAACAGCGTTGCGCAGGACAAACGCTTCCTGTTTAAATACATGCCTGAACTTGCCGACTATTTTCATTATCGCCACCTTGACGTCAGCACCTTAAAAGAGCTTGCCGCCCGCTGGAGACCGGACATTTTAAACGGCTTTAATA  >  1/1641098‑1641576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑