| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,617,686 | G→A | intergenic (‑173058/‑24078) | unknown ← / → unknown | tRNA‑Met‑CAT/tRNA‑Gly‑GCC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,617,686 | 0 | G | A | 94.5% | 169.7 / NA | 73 | intergenic (‑173058/‑24078) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Gly‑GCC |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (31/38); minor base C (0/4); total (31/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCTCACATAGAAAAAATCCGGTCCGGGGGAAAGCAATCCCACCAAATGAACGAACATTAAATTTAACATCTGATTGCCTAGATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCGCACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGCCAAATGCCGATGAAGAAGCAAAGTGCGGTCAAAATAAAAAATGTTTTTGCGCCGAGTACCGGCAGCAATAACGCGCCTAAAATCACGCCGACCAAACTGCCCCAAGTGCCGGGCGCGGGACG > 1/1617447‑1617928 | gCTCACATAGAAAAAATCCGGTCCGGGGGAAAGCAATCCCACCAAATGAACGAACATTAAATTTAACATCTGATTGCCTAGATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCAtaataa > 1:706491/1‑251 (MQ=255) cTCACATAGAAAAAATCCGGTCCGGGGGAAAGCAATCCCACCAAATGAACGAACATTAAATTTAACATCTGATTGCCTAGATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCAtaataa < 1:816417/250‑1 (MQ=255) cTCACATAGAAAAAATCCGGTCCGGGGGAAAGCAATCCCACCAAATGAACGAACATTAAATTTAACATCTGATTGCCTAGATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCAtaataa < 1:669213/250‑1 (MQ=255) cTCACATAGAAAAAATCCGGTCCGGGGGAAAGCAATCCCACCAAATGAACGAACATTAAATTTAACATCTGATTGCCTAGATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCAtaataa < 1:28708/250‑1 (MQ=255) tAGAAAAAATCCGGTCCGGGGGAAAGCAATCCCACCAAATGAACGAACATTAAATTTAACATCTGATTGCCTAGATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACt < 1:678072/251‑1 (MQ=255) aaTCCGGTCCGGGGGAAAGCAATCCCACCAAATGAACGAACATTAAATTTAACATCTGATTGCCTAGATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCa < 1:834879/251‑1 (MQ=255) ggggAAAGCAATCCCACCAAATGAACGAACATTAAATTTAACATCTGATTGCCTAGATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCtaataa > 1:824052/1‑250 (MQ=255) gggAAAGCAATCCCACCAAATGAACGAACATTAAATTTAACATCTGATTGCCTAGATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAac < 1:500230/250‑1 (MQ=255) cAATCCCACCAAATGAACGAACATTAAATTTAACATCTGATTGCCTAGATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGacac < 1:827706/224‑1 (MQ=255) cAATCCCACCAAATGAACGAACATTAAATTTAACATCTGATTGCCTAGATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAgg < 1:861330/249‑1 (MQ=255) aacgaacATTAAATTTAACATCTGATTGCCTAGATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGAttt > 1:616226/1‑250 (MQ=255) aacATTAAATTTAACATCTGATTGCCTAGATAAAATGTGCTAATACAAAAATAACACCGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGATTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACAAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATcc < 1:163364/251‑1 (MQ=255) acATTAAATTTAACATCTGATTGCCTAGATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATcc > 1:269028/1‑250 (MQ=255) cATTAAATTTAACATCTGATTGCCTAGATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCca > 1:54281/1‑251 (MQ=255) aaaaTTTAACATCTGATTGCCTAGATAAAATGTGCTAATACAAAAAAAACAACGAGGCTGTAGCCGGCTGCAAAAATATCGTCCACA‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACCCCATAAAAATGACACT‑TGCGGCACGGCTAATAACACAAGAAAAACCGCCACGATTTCATCCcacac < 1:764342/250‑1 (MQ=255) aaaaTTTAACATCTGATTGCCTAGAAAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCAAAAATATCGCCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGCCACT‑GGCGGCACGGCTAATACCACAAGGAAAACCGCCACGATTTCATCCcacac < 1:380050/250‑1 (MQ=255) aaaaTTTAACATCGGATTGCCGAGAAAAAATGTGCAAATAAAAAAAAAACAACGAGGCTTGAGCCTGCTGCAAAAATATCGTCCACC‑AAAATGCAAAACCTGTTGGTAAGTTTTTCGTAAAAATAGCGAAAAGGATAAGTTTTAAAAATATA‑AAACAGACGGAAGGTCACGAAAGCGAGGGCACCCCAAAAAAATGACACT‑GGCGGCACGGCAAAAAAAACAAGAAAAACCGCCACGATTTCATCCcacac < 1:1451/250‑1 (MQ=255) attaaaCATCTAATGGCCTAAAAAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCAAAAATATCGTCCACC‑ATAATGCCAACGCCGTTGGTAAGTTTTTCGTCAAAATAGCAAAAAGGATAGGGTTTTAAAATATC‑AAACAGACGGAAAGACACAAAAGCAATGCCCCCCCATAAAAAGGACCCT‑TGCGGCACGGCAAATACCACAAGGAAAACCGCCACGATTTCATCCCACACAAt < 1:131961/247‑1 (MQ=255) aTTTAACATCTGATTGCCTAGATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAAt > 1:818830/1‑251 (MQ=255) aTTTAACATCTGATTGCCTAGATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAACGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAAt > 1:264712/1‑251 (MQ=255) tttAACATCTGATTGCCTAGATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAac > 1:48386/1‑215 (MQ=255) taaaCATCTGATTGCCTAGAAAAAATGTGCTAATAAAAAAATAACAACGATGCTGTAGCCTGCTGCAAAAATATCGTCCACT‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTAAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑GGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAAtgc < 1:424266/249‑1 (MQ=255) aCATCTGATTGCCTAGATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATaataat > 1:139875/1‑187 (MQ=255) cATCTGATTGCCTAGATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACAcc < 1:79880/178‑1 (MQ=255) gCCTAGATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCacac > 1:842773/1‑168 (MQ=255) gCCTAGATAAAATGTGCTAATAAAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTAAAAATAGCGAATAGGATAAGGTTTAAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACCCCAAAATAATGACACT‑GGCGGCACGGCTAATAACACAAGAAAAACCGCCACGATTTCATCCCACACAATGCTGCCg < 1:39232/243‑1 (MQ=255) gATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCtaataa > 1:751169/1‑195 (MQ=255) gATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACg > 1:466692/1‑250 (MQ=255) gATAAAATGTGCTAATACAAAAAAAACAACGATGCTGTAGCCTGCTGCAAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTAAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGAGGGCACACCAAAATAATGACACT‑TGCGGCACGGCTAATAACAAAAGAAAAACCGCCACGATTTCATCCCACACAAtgc < 1:229806/233‑1 (MQ=255) aTAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGAGGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGcc < 1:133074/251‑1 (MQ=255) aTAAAATGTGCTAATACAAAAAAAACAACGATGCTGTAGCCTGCTGCAAAAATATCGTCCACC‑ATAATGCAAAAGCCGTTGGTGAGTTTTTCGTAAAAATAGCGAATAGGATAAGTTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACCCT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGcc < 1:796969/251‑1 (MQ=255) gtgCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCAtaataa < 1:15622/163‑1 (MQ=255) gtgCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATc > 1:868187/1‑235 (MQ=255) tgCTAAAAAAAAAATAAAAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCCCC‑AAAATGCAAAAGCCGTGGGTGAGTTTTTCGTAAAAATAGCGAATAGAATAGGGTTTAAAAATATC‑AACCAGACGAAAAGTCACGAAAGCGAGGGCCCCCAAAAATAATGACCCT‑TGCGGCCCGGAAAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCa < 1:760366/250‑1 (MQ=255) tccaaaTAAAAAAATAACACCGATGCTGTACCCTGCTGCCAAAATATCGTCCCCC‑ATAATCCAAAACCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATA‑AAACAGACGAAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑GGCGGCCCGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCa < 1:522860/246‑1 (MQ=255) aaaaaCAAAAATAACAACGATGCTGTAGCCTGCTGCAAAAATATCGTCCACC‑ATAATGCAAAAGCCGTTGGTGATTTTTTCGTAAAAATAGCGAATAGGATAAGTTTTAAAAATATC‑AAACAGACGGAAAGTCACAAAAGCGATGGCACCCCATAATAATGCCCCT‑TGCGGCCCGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGAc < 1:566989/247‑1 (MQ=255) aaTAAAAAAAAAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑AAAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGAAAAGTTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGAAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACt < 1:302980/251‑1 (MQ=255) tACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTga > 1:158261/1‑250 (MQ=255) aaaaaTAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGAc > 1:143588/1‑245 (MQ=255) aaaaTAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCTTTGGTGATTTTTTCGTCAAAATAGCAAATAGGATAAGGTTTAAAAATATC‑AAACAGCCGGAAAGTCACGAAAGCGATGGCACCCCATAATAATGACACT‑TGCGGCCCGGCTAATAACACAAGAAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCg < 1:548439/251‑1 (MQ=255) caacGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCAtaataa < 1:636077/145‑1 (MQ=255) aTGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGCCa > 1:824149/1‑251 (MQ=255) aTGCTGTAGCCTGCTGCAAAAATATCGTCCCCC‑ATAATCCAAAACCCGTGGGTGATTTTTCCGAAAAAATAGGAAATAGGAAAAGGTTTTAAAATACC‑AAACAGCCGGAAAGTCACAAAAGCGATGGCACCCCATAATAATAACCCT‑GGCGCCCCGGTTAATAACAAAAGGAATACCGCCACGATTTCATCCCACACAATGCTGCCGTGa < 1:443057/210‑1 (MQ=255) aTGCTGTAGCCTGCTGCAAAAATATCGTCCACC‑ATAATGCAAAAGCCGTTGGTGAGTTTTTCGTAAAAATAGCGAATAGGATAAGTTTTAAAAATATC‑AAACAGACGAAAAGTCACGAAAGCGATGGCCCCCCATAATAATGCCACT‑TGCGGCCCGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGCCa < 1:666630/251‑1 (MQ=255) aTGCTGTAGCATGCTCCAAAAATAGCGTCCCCC‑AAAATGCAAAAGCCGTTGGTGATTTTTCCGTCAAAATAGAAAAAAGGATAAGGTTTTAAAATATC‑AAACGGCCGGAAAGACACAAAGGCAATGGCACACCATAAAAAGGACGCT‑TGCGGCCCGGCTAATAACAAAAGAAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGt < 1:383726/226‑1 (MQ=255) gCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCAtaataa > 1:298535/1‑138 (MQ=255) gCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCAtaataa > 1:256317/1‑138 (MQ=255) gCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGCCaaa > 1:529548/1‑251 (MQ=255) taacccTGCTGCAAAAATATCGT‑CACCAATAATCCAAAAGCGGTTGGTAAGTTTTGCTTCAAAATGGCGAATAGGATAAGGTTTAAAAAAACC‑AACCAGACGGAAGGTCAGAAAAGTAATGGCACCCCATAAAAATGAC‑CTGTGCGGCGCGGCAAATAGCCCAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGCCAAATga < 1:666364/247‑2 (MQ=255) gcCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCAtaataa < 1:358158/125‑1 (MQ=255) gcCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGa < 1:743163/128‑1 (MQ=255) gcCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAac > 1:687502/1‑150 (MQ=255) ccAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCataata < 1:592385/123‑1 (MQ=255) atCGCCCACC‑ATAATGCCAAAGCCGTTGGTGATTTTTTCGTAAAAATAGCGAATAGGAAAAGGTTTAAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCAAAATAATGACACT‑TGCGGCACGGCTAAAAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGCCAAATGCCGATGAAGAAGCAAAGTg < 1:529991/251‑1 (MQ=255) cc‑aTAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATcc > 1:324838/1‑161 (MQ=255) cc‑aTAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGCCAAATGCCGATGAAGAAGCAAAGTGCGGTCaaa > 1:394649/1‑251 (MQ=255) cc‑aTAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGCCAAATGCCGATGAAGAAGCAAAGTGCGGTCaaa > 1:118515/1‑251 (MQ=255) aaaGCCGTTGGTGAGTTTTTCGTCAAAATAGCAAATAGGATAGGGTTTAAAAATATC‑AAACAGACGAAAAGTCACGAAAGCGAGGGCACCCCATAATAATGACCCT‑TGCGGCACGGTTAATAACACAAGAAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGCCAAATGCCGATGAAGAAGCAAAGTGCGGTCAAAATAAAAAATg < 1:512727/251‑1 (MQ=255) cctttGGTGAGTTTTTCGTAAAAAGAGCGAATAGGAAAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACAAAAGCGAGGGCACACCAAAATAAGGCCACT‑TGCGGCACGGGTAATAACAAAAGAAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGCCAAATGCCGATGAAGAAGCAAAGTGCGGTCAAAATAAAAAATGtttt < 1:395479/248‑1 (MQ=255) aaTAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCCCGAAAGCGATGCCCCACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGAAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGCCAAATGCCGATGAAGAAGCAAAGTGCGGTCAAAATAAAAAATGTTTTTGCGCCGAGTACCGGCAGCAAt < 1:64038/251‑1 (MQ=255) aGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCAc > 1:702928/1‑148 (MQ=255) aGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGCCAAATGCCGATGAAGAAGCAAAGTGCGGTCAAAATAAAAAATGTTTTTGCGCCGAGTACCGGCAGCAATaa > 1:345555/1‑250 (MQ=255) cGAAAAGGATAAGGTTTAAAAATATC‑AAACAGACGAAAAGCCACGAAAGCGATGCCACCCCAAAATAATCACACT‑TGCGGCAGGGCTAATACCACAAGAAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGCCAAATGCCGATGAAGAAGCAAAGTGCGGTCAAAATAAAAAATGTTTTTGCGCCGAGTACCGGCAGCAATAAcg < 1:349038/250‑1 (MQ=255) gaatagaataA‑GTTTTAAAAAAACAAAACAGAGGAAAAGCCACAAAAGCGATGGCACCCAAAAATAAGGACACT‑GGCGGCACGGCAAAAAACACAAGAAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGCCAAATGCCGATGAAGAAGCAAAGTGCGGTCAAAATAAAAAATGTTTTTGCGCCGAGTACCGGCAGCAATAAcgc < 1:393894/250‑1 (MQ=255) gAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATc > 1:186186/1‑139 (MQ=255) ggATAAGTTTTAAAAATATC‑AAACAGACGAAAAGCCACAAAAGCGATGGCACCCCATAATAATGACCCT‑TGCGGCCCGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGcc < 1:167362/172‑1 (MQ=255) ggATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCg > 1:245623/1‑161 (MQ=255) ggATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGCCAAATGCCGATGAAGAAGCAAAGTGCGGTCAAAATAAAAAATGTTTTTGCGCCGAGTACCGGCAGCAATAACGCGCCTaa > 1:563812/1‑251 (MQ=255) ggTTTAAAAATATC‑AAACAGACGGAAAGTCACGAAGGCGATGGCACACAATAATAATGACCCT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGCCAAATGCCGATGAAGAAGCAAAGTGCGGTCAAAATAAAAAATGTTTTTGCGCCGAGTACCGGCAGCAAt < 1:664335/234‑1 (MQ=255) gTTTAAAAATATA‑AAACAGACGGAAAGTCACAAAAGCGATGGCACACCATAATAATGACACT‑GGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGCCAAATGCCGATGAAGAAGCAAAGTGCGGTCAAAATAAAAAATGTTTTTGCGCCGAGTACCGgc < 1:538055/227‑1 (MQ=255) gACGGAAAGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGCCAAATGc > 1:618507/1‑153 (MQ=255) aaGTCACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGCCAAATGCCGATGAAGAAGCAAAGTGCGGTCAAAATAAAAAATGTTTTTGCGCCGAGTACCGGCAGCAATAACGCGCCTAAAATCACGCCGACCAAACTGCCCCAAGTGCCg > 1:879449/1‑251 (MQ=255) cACGAAAGCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGCCAAATGCCGATGAAGAAGCAAAGTGCGGTCAAAATAAAAAATGTTTTTGCGCCGAGTACCGGCAGCAATAACGCGCCTAAAATCACGCCGACCAAACTGCCCCAAGTGCCGGgcg > 1:527265/1‑251 (MQ=255) gCGATGGCACACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGCCAAATGCCGATGAAGAAGCAAAGTGCGGTCAAAATAAAAAATGTTTTTGCGCCGAGTACCGGCAGCAATAACGCGCCTAAAATCACGCCGACCAAACTGCCCCAAGTGCCGGGCGCGGGACg > 1:641531/1‑251 (MQ=255) | GCTCACATAGAAAAAATCCGGTCCGGGGGAAAGCAATCCCACCAAATGAACGAACATTAAATTTAACATCTGATTGCCTAGATAAAATGTGCTAATACAAAAATAACAACGATGCTGTAGCCTGCTGCCAAAATATCGTCCACC‑ATAATGCCAAAGCCGTTGGTGAGTTTTTCGTCAAAATAGCGAATAGGATAAGGTTTTAAAATATC‑AAACAGACGGAAAGTCACGAAAGCGATGGCGCACCATAATAATGACACT‑TGCGGCACGGCTAATAACACAAGGAAAACCGCCACGATTTCATCCCACACAATGCTGCCGTGATCGTGCACGCCCATGTCATGACTGGTGCGTTCGCATAGCCAAATGCCGATGAAGAAGCAAAGTGCGGTCAAAATAAAAAATGTTTTTGCGCCGAGTACCGGCAGCAATAACGCGCCTAAAATCACGCCGACCAAACTGCCCCAAGTGCCGGGCGCGGGACG > 1/1617447‑1617928 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |