| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,595,616 | G→T | intergenic (‑150988/‑46148) | unknown ← / → unknown | tRNA‑Met‑CAT/tRNA‑Gly‑GCC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,595,616 | 0 | G | T | 98.7% | 209.4 / ‑3.4 | 75 | intergenic (‑150988/‑46148) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Gly‑GCC |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base T (39/35); minor base . (1/0); total (40/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.23e-01 | |||||||||||
GGTTTAGCTCGGCGGCAAAGCGATTCGGTTGCATACCGCGTTCTTCTTGGAATTTGAATTCGGATGAAGGGTAAGTCGCCGCCACATTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTGTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTCGCCAATAAAAGTGCGGTCAAAAATTTTATCGTTTTTTTCATATTAACCTCAGAAAAAATGTACTTTATGAAAGAGTTGGGAAGTTATTGTGCTACCCGCACTGGCG > 1/1595376‑1595855 | ggTTTAGCTCGGCGGCAAAGCGATTCGGTTGCATACCGCGTTCTTCTTGGAATTTGAATTCGGATGAAGGGTAAGTCGCCGCCACATTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTttgt < 1:188232/248‑1 (MQ=255)ggTTTAGCTCGGCGGCAAAGCGATTCGGTTGCATACCGCGTTCTTCTTGGAATTTGAATTCGGATGAAGGGTAAGTCGCCGCCACATTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTttg < 1:318029/247‑1 (MQ=255)ggTTTAGCTCGGCGGCAAAGCGATTCGGTTGCATACCGCGTTCTTCTTGGAATTTGAATTCGGATGAAGGGTAAGTCGCCGCCACATTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTtgttgt > 1:635819/1‑251 (MQ=255) cTCGGCGGCAAAGCGATTCGGTTGCATACCGCGTTCTTCTTGGAATTTGAATTCGGATGAAGGGTAAGTCGCCGCCACATTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATa < 1:832983/251‑1 (MQ=255) cggcAAAGCGATTCGGTTGCATACCGCGTTCTTCTTGGAATTTGAATTCGGATGAAGGGTAAGTCGCCGCCACATTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATtg < 1:473790/251‑1 (MQ=255) cggcAAAGCGATTCGGTTGCATACCGCGTTCTTCTTGGAATTTGAATTCGGATGAAGGGTAAGTCGCCGCCACATTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATtg < 1:741348/251‑1 (MQ=255) gTTGCATACCGCGTTCTTCTTGGAATTTGAATTCGGATGAAGGGTAAGTCGCCGCCACATTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGGGAc > 1:229309/1‑244 (MQ=255) ttGCATACCGCGTTCTTCTTGGAATTTGAATTCGGATGAAGGGTAAGTCGCCGCCACATTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCgtccaataactgattgatagcgtcc < 1:493913/250‑25 (MQ=255) gCATACCGCGTTCTTCTTGGAATTTGAATTCGGATGAAGGGTAAGTCGCCGCCACATTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGaa > 1:625579/1‑251 (MQ=255) gCATACCGCGTTCTTCTTGGAATTTGAATTCGGATGAAGGGTAAGTCGCAGCCACATTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCCTTCTACACCGGCAAAAGA‑GGCGGTGAAAGCTTTTTTTTTTTGTTTGGGTTAATtggtggctgtctgttttaca > 1:227145/1‑237 (MQ=255) tcttctTGGAATTTGAATTCGGATGAAGGGTAAGTCGCCGCCACATTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTc < 1:166439/251‑1 (MQ=255) tcttctTGGAATTTGAATTCGGATGAAGGGTAAGTCGCCGCCACATTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTc < 1:462095/251‑1 (MQ=255) cttcttGGAATTTGAATTCGGATGAAGGGTAAGTCGCCGCCACATTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTttgttg > 1:138520/1‑208 (MQ=255) gAATTTGAATTCGGATGAAGGGTAAGTCGCCGCCACATTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTtttttt < 1:810734/196‑1 (MQ=255) cGGATGAAGGGTAAGTCGCCGCCACATTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGc > 1:108023/1‑250 (MQ=255) aaGGGTAAGTCGCCGCCACATTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAA‑CCGGCCTTCTACACCGGGCAAAGAGGGGGGAAAAGGCTTTTTTTTGTTTTTCGGTTAAATTGGGGGGGACTTTTTGGGAAAAGGAAACGTCCTGCCATTGCGGATTTGCCAgggc > 1:142491/1‑247 (MQ=255) ccgccACATTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAata < 1:807111/251‑1 (MQ=255) acaTTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAAc < 1:755000/251‑1 (MQ=255) caTTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGGAAAGGATACGTCCTGCCATTGCAGATTTGCCCGTGCCGTTGAGTTAATATGAACa > 1:663420/1‑251 (MQ=255) caTTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTc > 1:220380/1‑208 (MQ=255) caTTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTc < 1:583129/208‑1 (MQ=255) caTTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACa > 1:518161/1‑251 (MQ=255) caTTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGGGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACa > 1:518724/1‑251 (MQ=255) aTTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCa < 1:229584/213‑1 (MQ=255) aTCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTTGTGGGGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTTCCAGTGCCGTTGAGTTAATATGAACAGGCGGATTAGcc > 1:831365/1‑250 (MQ=255) aTCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTc > 1:501257/1‑195 (MQ=255) aTCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGccc < 1:788413/251‑1 (MQ=255) aTCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGcc > 1:335999/1‑250 (MQ=255) aTCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGcc < 1:213474/250‑1 (MQ=255) aTCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGGTAATATGAACAGGCGTATTAGcc > 1:613992/1‑250 (MQ=255) aTCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGGGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATTAACAGGCGTATTa > 1:283685/1‑247 (MQ=255) cTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCgg > 1:742646/1‑251 (MQ=255) ccaccGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTgg > 1:81738/1‑250 (MQ=255) cACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCt < 1:858817/251‑1 (MQ=255) tGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTg < 1:199376/251‑1 (MQ=255) ggACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAata < 1:483739/212‑1 (MQ=255) ggACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAAc < 1:838950/217‑1 (MQ=255) aCGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGat < 1:174341/251‑1 (MQ=255) aTGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTc < 1:340653/251‑1 (MQ=255) gTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTCGCCAATaaaa > 1:673/1‑251 (MQ=255) tttCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGatat > 1:257042/1‑237 (MQ=255) ttCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTCGCCAATAAAAGTg < 1:2988/251‑1 (MQ=255) cAATAGGACTGATAATTTCCATTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAata < 1:436079/191‑1 (MQ=255) cAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTTAAGGCTTTTTTTTGTTGTTTGGATAAATTGGGGGTGACTTTTTCTGCAAAGGATACGTTCTTCCATTGCTGATTTGCCACGGCCCTTGAGTTAATATGAAAAGGCGTATTAGCCCGGCTTGGCGAGGCTACGGCCATATTCCCCAATAAAAGGGCg > 1:845658/1‑251 (MQ=255) cAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCa < 1:603643/160‑1 (MQ=255) cAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTg > 1:633737/1‑228 (MQ=255) cAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGGGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTCGCCAATAAAAg > 1:240995/1‑247 (MQ=255) cAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAAGCTTTTTTTTGTTGTTTGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACCTCCTGCCATTGCAGATTTGCCAGTGCCCTTGAGTTTATATg > 1:841599/1‑193 (MQ=255) ggACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTcc < 1:1896/150‑1 (MQ=255) gACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTCGCCAATAAAAGTGCGGGCaaa > 1:490981/1‑251 (MQ=255) gACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGGGGGGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTCGCCAATAAAAGTGCGGTCaaa > 1:858166/1‑251 (MQ=255) tGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTCGCCAATAAAAGTGCGGTCAAAAAt < 1:195451/251‑1 (MQ=255) tGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTCGCCAATAAAAGTGCGGTCAAAAAt < 1:21830/251‑1 (MQ=255) gATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGcc < 1:639033/149‑1 (MQ=255) gATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGa > 1:488451/1‑210 (MQ=255) gATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTT‑TTTTTTTTGTTCGGATAAATttgtgg > 1:836770/1‑118 (MQ=255) cTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAata > 1:495913/1‑170 (MQ=255) tCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATTAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATAAACAGGCGTATTAGCCCGGCTTGGCGAGGCCACTGCGATATTCGCCAATAAAAGTGCGGGCCAAAATTTTATTGttttttt > 1:455503/1‑251 (MQ=255) gTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTa < 1:183936/177‑1 (MQ=255) gAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGGTAAATTGGTGGTGACTTTTTTGGAAAAGGATACGTCCTGCCATTTCAGATTTGCCAGTGCCGTTGAGTTAata > 1:691912/1‑146 (MQ=255) aTGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGGGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGAt > 1:291062/1‑121 (MQ=255) gATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTCGCCAATAAAAGTGCGGTCAAAAATTTTATCGTTTTTTTCATATTAACCTCAGAAAAAATGTACttt > 1:44534/1‑251 (MQ=255) cAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTACGATATTCGCCAATAAAAGTGCGGTCAAAAATTTTATCGTTTTTTTCATATTAACCTCAGAAAAAATGTACTTTATGAAagag < 1:182336/251‑1 (MQ=255) ggCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGGTAAATTGGTGGGGACTTTTTTGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCg > 1:247734/1‑164 (MQ=255) gCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTCGCCAATAAAAGTGCGGTCAAAAATTTTATCGTTTTTTTCATATTAACCTCAGAAAAAATGTACTTTATGAAAGAGTTGGGaa > 1:296283/1‑251 (MQ=255) cTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTCGCCAATAAAAGTGCGGTCAAAAATTTTATCGTTTTTTTCATATTAACCTCAGAAAAAATGTACTTTATGAAAGAGTTGGGAAg < 1:69957/251‑1 (MQ=255) tttCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTCGCCAATAAAAGTGCGGTCAAAAATTTTATCGGTTTTTTTATATTAACCTCAGAAAAAATGTACTTTATGAAAGAGTTGGGGAGt > 1:691633/1‑251 (MQ=255) ttCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTTGCCAATAAAAGTGCGGTCAAAAATTTTATCGTTTTTTTCATATTAACCTCAGAAAAAATGTAc > 1:889293/1‑229 (MQ=255) ttCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTCGCCAATAAAAGTGCGGTCAAAAATTTTATCGTTTTTTTCATATTAAc < 1:260565/213‑1 (MQ=255) ttCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTCGCCAATAAAAGTGCGGTCAAAAATTTTATCGTTTTTTTCATATTAACCTCAGAAAAAATGTACTTTATGAAAGAGTTGGGGAGtt > 1:457028/1‑251 (MQ=255) ttCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTCGCCAATAAAAGTGCGGTCAAAAATTTTATCGTTTTTTTCATATTAACCTCAGAAAAAATGTACTTTATGAAAGAGTTGGGAAGtt > 1:735603/1‑251 (MQ=255) acacCGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTCGCCAATAAAAGTGCGGTCAAAAATTTTATCGTTTTTTTCATATTAACCTCAGAAAAAATGTACTTTATGAAAGAGTTGGGAAGTTATtg < 1:95227/251‑1 (MQ=255) ccGGCAAAAGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTCGCCAATAAAAGTGCGGTCAAAAATTTTATCGTTTTTTTCATATTAACCTCAGAAAAAATGTACTTTATGAAAGAGTTGGGAAGTTATTGTGc < 1:498830/251‑1 (MQ=255) aaaaGA‑GGCGGTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTCGCCAATAAAAGTGCGGTCAAAAATTTTATCGTTTTTTTCATATTAACCTCAGAAAAAATGTACTTTATGAAAGAGTTGGGAAGTTATTGTGCTAccc < 1:41256/251‑1 (MQ=255) ggTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTCGCCAATAAAAGTGCGGTCAAAAATTTTATCGTTTTTTTCATATTAACCTCAGAAAAAATGTACTTTATGAAAGAGTTGGGAAGTTATTGTGCTACCCGCACTGGCg > 1:797017/1‑251 (MQ=255) gTAAAGGCTTTTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTCGCCAATAAAAGTGCGGTCAAAAATTTTATCGTTTTTTTCATATTAACCTCAGAAAAAATGTACTTTATGAAAGAGTTGGGAAGTTATTGTGCTACCCGCACTGGCg < 1:417448/250‑1 (MQ=255) | GGTTTAGCTCGGCGGCAAAGCGATTCGGTTGCATACCGCGTTCTTCTTGGAATTTGAATTCGGATGAAGGGTAAGTCGCCGCCACATTAAAATTGCTATCTAAAACCACCGCACTTGGGACGAATGCGCTTTTGTTTTCAATAGGACTGATAATTTCCACTTCCAAAGTGCCTTGGTTCGCCGGAATGCGATAGGCGGCAATCGGGCTTTCTACACCGGCAAAAGA‑GGCGGTAAAGGCTTGTTTTTGTTGTTCGGATAAATTGGTGGTGACTTTTTCGGAAAAGGATACGTCCTGCCATTGCAGATTTGCCAGTGCCGTTGAGTTAATATGAACAGGCGTATTAGCCCGGCTTGGCGAGGCTACTGCGATATTCGCCAATAAAAGTGCGGTCAAAAATTTTATCGTTTTTTTCATATTAACCTCAGAAAAAATGTACTTTATGAAAGAGTTGGGAAGTTATTGTGCTACCCGCACTGGCG > 1/1595376‑1595855 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |