Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,593,242 A→G intergenic (‑148614/‑48522) unknown ← / → unknown tRNA‑Met‑CAT/tRNA‑Gly‑GCC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,593,2420AG100.0% 136.4 / NA 52intergenic (‑148614/‑48522)unknown/unknowntRNA‑Met‑CAT/tRNA‑Gly‑GCC
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (26/26);  total (26/26)

ATTAAATGCGATTTCCCTGCCGTTACTCGCCTCCCTTGGCATTGAAAACGTGAAGGTTTTCCCGCGTTTAAAAGTGGCGGTGCTTTCTACCGGTGATGAATTGGTGCCGGTGGGCAAACCGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACACCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCATTAAACCGGGTAAACCTTTTGCTTTCGGCAAATTAAAAAACGCCTGGTTCTGCGGTTTGCCGGGCAACCCGGTGTCGGCGTTGGTGACATTTTATCAATTAGTG  >  1/1593001‑1593472
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                      
attaAATGCGATTTCCCTGCCGTTACTCGCCTCCCTTGGCATTGAAAACGTGAAGGTTTTCCCGCGTTTAAAAGTGGCGGTGCTTTCTACCGGTGATGAATTGGTGCCGGTGGGCAACCCGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTg                                                                                                                                                                                                                               <  1:38249/251‑1 (MQ=255)
                   ccGTTACTCGCCTCCCTTGGCATTGAAAACGTGAAGGTTTTCCCGCGTTTAAAAGTGGCGGTGCTTTTTACCGGGGGTGAATTTGGGCCGGGGGGGAAACCGCTACAAAACGGGGAAAATTATGA‑ACACAACCGGTTCGGCGTGGAAATATTATTGGGAAAAATAAAATGCGAAGGGTTGGGTTTTGGGATTTTTCCAGATAAAGAAGGGGAAATTT‑AAAAAGCCTTTATTGaaaggccacaaaaagcggg                                                                                                                                                                                                            >  1:414157/1‑234 (MQ=255)
                          tCGCCTCCCTTGGCATTGAAAACGTGAAGGTTTTCCCGCGTTTAAAAGTGGCGGTGCTTTCTACCGGTGATGAATTGGTGCCGGTGGGCAAACCGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTg                                                                                                                                                                                                     <  1:144571/251‑1 (MQ=255)
                               tCCCTTGGCATTGAAAACGTGAAGGTTTTCCCGCGTTTAAAAGTGGCGGTGCTTTCTACCGGTGATGAATTGGTGCCGGTGGGCAAACCGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTAc                                                                                                                                                                                                <  1:291698/251‑1 (MQ=255)
                                cccTTGGCATTGAAAACGTGAAGGTTTTCCCGCGTTTAAAAGTGGCGGTGCTTTCTACCGGTGATGAATTGGTGCCGGTGGGCAAACCGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTAcc                                                                                                                                                                                               <  1:366043/251‑1 (MQ=255)
                                                cGTGAAGGTTTTCCCGCGTTTAAAAGTGGCGGTGCTTTCTACCGGTGATGAATTGGTGCCGGTGGGCAAACCGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCg                                                                                                                                                                               <  1:677110/251‑1 (MQ=255)
                                                 gTGAAGGTTTTCCCGCGTTTAAAAGTGGCGGTGCTTTTTTCCGGTGATGAATTGGGGCCGGTGGGCAAACCGCTACAAACCGGGCCAATTTATGACAC‑CAACCGCTTCGCCGTGAAATTATTATTTGCAAAATTAAACTGCGAAGTGGTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCCATTTGAAAACGCCTTTATTTAAGCGCCACAACAGGCGGGTTTGGTGGTTACCAGCGGCGGCGGTTcc                                                                                                                                                                                >  1:144914/1‑249 (MQ=255)
                                                                 gTTTAAAAGTGGCGGTGCTTTCTACCGGGGATGAATTTGTGCCGGTGGGCAAACCGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGGATTTTGCCAGATAACG‑AGGCGCAATTTTAAAACGCCTTTATTGAAGCGCAACAACAGGCGGGTTTGGGGATTACCAGCGGCGGCGGTTTCGTGGGGGAAGCGGGtttt                                                                                                                                                              >  1:718375/1‑250 (MQ=255)
                                                                    tAAAAGTGGCGGTGCTTTCTACCGGTGATGAATTGGTGCCGGTGGGCAAACCGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCAcc                                                                                                                                                           <  1:251788/251‑1 (MQ=255)
                                                                            gCGGTGCTTTCTACCGGTGATGAATTGGTGCCGGTGGGCAAACCGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAg                                                                                                                                                                                                                 <  1:613800/189‑1 (MQ=255)
                                                                               gTGCTTTCTACCGGTGATGAATTGGTGCCGGTGGGCAAACCGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATAttt                                                                                                                                                 <  1:565370/250‑1 (MQ=255)
                                                                                   tttCTACCGGTGATGAATTGGTGCCGGTGGGCAAACCGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTagag                                                                                                                                            <  1:367079/251‑1 (MQ=255)
                                                                                    ttCTACCGGTGATGAATTGGTGCCGGTGGGCAAACCGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAgaga                                                                                                                                           >  1:149653/1‑251 (MQ=255)
                                                                                         ccGGTGATGAATTGGTGCCGGTGGGCAAACCGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTg                                                                                                                                      <  1:708911/251‑1 (MQ=255)
                                                                                            gTGATGAATTGGTGCCGGTGGGCAAACCGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTAc                                                                                                                                                                                                >  1:321786/1‑190 (MQ=255)
                                                                                            gTGATGAATTGGTGCCGGTGGGCAAACCGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTggg                                                                                                                                    >  1:461742/1‑250 (MQ=255)
                                                                                             tgatgaATTGGTGCCGGTGGGCAAACCGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCa                                                                                                                                  <  1:140229/251‑1 (MQ=255)
                                                                                              gatgaATTGGTGCCGGTGGGCAAACCGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCaa                                                                                                                                 >  1:865111/1‑251 (MQ=255)
                                                                                                 gaATTGGTGCCGGTGGGCAAACCGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGCGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAAt                                                                                                                              >  1:549184/1‑251 (MQ=255)
                                                                                                       gTGCCGGTGGGCAAACCGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGAATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAAtt                                                                                                                         <  1:711755/250‑1 (MQ=255)
                                                                                                                    aaCCGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTg                                                                                                                                                                                                                               <  1:561962/135‑1 (MQ=255)
                                                                                                                      ccGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTg                                                                                                                                                                                                                               >  1:681408/1‑133 (MQ=255)
                                                                                                                      ccGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCAt                                                                                                         >  1:267210/1‑251 (MQ=255)
                                                                                                                      ccGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCAt                                                                                                         >  1:756318/1‑251 (MQ=255)
                                                                                                                        gCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCATTa                                                                                                       >  1:849157/1‑251 (MQ=255)
                                                                                                                                     cAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCATTAAACCGGGTAAAcc                                                                                          <  1:805153/251‑1 (MQ=255)
                                                                                                                                      aaaTTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCATTAAACCGGGTAAACCt                                                                                         <  1:222423/251‑1 (MQ=255)
                                                                                                                                       aaTTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCATTAAAc                                                                                                    <  1:183223/239‑1 (MQ=255)
                                                                                                                                        aTTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTag                                                                                                                                              <  1:307258/196‑1 (MQ=255)
                                                                                                                                              gACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTag                                                                                                                                              >  1:114534/1‑190 (MQ=255)
                                                                                                                                                cac‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTg                                                                                                                                                                                                                               <  1:211287/107‑1 (MQ=255)
                                                                                                                                                                 gTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATAtttt                                                                                                                                                >  1:472308/1‑170 (MQ=255)
                                                                                                                                                                             ttGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCATTAAACCGGGTAAACCTTTTGCTTTCGGCAAATTAAAAAACGCCTGGTTCTGCgg                                                   <  1:240027/251‑1 (MQ=255)
                                                                                                                                                                                    aaTTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCATTAAACCGGGTAAACCTTTTGCTTTCGGCAAATTAAAAAACGCCTGGTTCTGCGGTTTGCCg                                            <  1:208315/251‑1 (MQ=255)
                                                                                                                                                                                    aaTTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCATTAAACCGGGTAAACCTTTTGCTTTCGGCAAATTAAAAAACGCCTGGTTCTGCGGTTTGCCg                                            >  1:661757/1‑251 (MQ=255)
                                                                                                                                                                                    aaTTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGCGGGCAAAATCAATTTCTGGAAAATCGCCATTAAACCGGGTAAACCTTTTGCTTTCGGCAAATTAAAAAACGCCTGGCTCTGCGGTTTGCCg                                            >  1:790677/1‑251 (MQ=255)
                                                                                                                                                                                             gCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCATTAAACCGGGTAAACCTTTTGCTTTCGGCAAATTAAAAAACGCCTGGTTCTGCGGTTTGCCGGGCAACCCg                                   >  1:217216/1‑251 (MQ=255)
                                                                                                                                                                                               gAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCATTAAACCGGGTAAACCTTTTGCTTTCGGCAAATTAAAAAACGCCTGGTTCTGCGGTTTGCCGGGCAACCCGgt                                 >  1:554822/1‑251 (MQ=255)
                                                                                                                                                                                                  gtgtTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATAttt                                                                                                                                                 <  1:748673/136‑1 (MQ=255)
                                                                                                                                                                                                  gtgtTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTagag                                                                                                                                            >  1:246567/1‑141 (MQ=255)
                                                                                                                                                                                                  gtgtTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCATTAAACCGGGTAAACCTTTTGCTTTCGGCAAATTAAAAAACGCCTGGTTCTGCGGTTTGCCGGGCAACCCGgtgt                               >  1:635282/1‑250 (MQ=255)
                                                                                                                                                                                                   tgtTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCATTAAACCGGGTAAACCTTTTGCTTTCGGCAAATTAAAAAACGCCTGGTTCTGCGGTTTGCCGGGCAACCCGgtgt                               <  1:503837/249‑1 (MQ=255)
                                                                                                                                                                                                    gtTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGc                                                                                                                                   <  1:56738/148‑1 (MQ=255)
                                                                                                                                                                                                    gtTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCATTAAACCGGGTAAACCTTTTGCTTTCGGCAAATTAAAAAACGCCTGGTTCTGCGGTTTGCCGGGCAACCCGGTGTCgg                            >  1:882002/1‑251 (MQ=255)
                                                                                                                                                                                                      tGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCATTAAACCGGGTAAACCTTTTGCTTTCGGCAAATTAAAAAACGCCTGGTTCTGCGGTTTGCCGGGCAACCCGGTGTCGGCg                          <  1:460151/251‑1 (MQ=255)
                                                                                                                                                                                                      tGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCATTAAACCGGGTAAACCTTTTGCTTTCGGCAAATTAAAAAACGCCTGGTTCTGCGGTTTGCCGGGCAACCCGGTGTCGGCg                          <  1:600823/251‑1 (MQ=255)
                                                                                                                                                                                                               gTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCATTAAACCGGGTAAACCTTTTGCTTTCGGCAAATTAAAAAACGCCTGGTTCTGCgg                                                   >  1:786761/1‑217 (MQ=255)
                                                                                                                                                                                                                tATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCATTAAACCGGGTAAACCTTTTGCTTTCGGCAAATTAAAAAACGCCTGGTTCTGCGGTTTGCCGGGCAACCCGGTGTCGGCGTTGGTGACAt                >  1:16860/1‑251 (MQ=255)
                                                                                                                                                                                                                    ttGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCATTAAACCGGGTAAACCTTTTGCTTTCGGCAAATTAAAAAACGCCTGGTTCTGCGGTTTGCCGGGCAACCCGgtgt                               >  1:640469/1‑232 (MQ=255)
                                                                                                                                                                                                                    ttGCCAGATAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCATTAAACCGGGTAAACCTTTTGCTTTCGGCAAATTAAAAAACGCCTGGTTCTGCGGTTTGCCGGGCAACCCGGTGTCGGCGTTGGTGACATTTTa            >  1:526025/1‑251 (MQ=255)
                                                                                                                                                                                                                           aTAACG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCATTAAACCGGGTAAACCTTTTGCTTTCGGCAAATTAAAAAACGCCTGGTTCTGCGGTTTGCCGGGCAACCCGGTGTCGGCGTTGGTGACATTTTATCAAtt      <  1:419600/250‑1 (MQ=255)
                                                                                                                                                                                                                              aCG‑AGGCGCAATTTGAAAACGCCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCATTAAACCGGGTAAACCTTTTGCTTTCGGCAAATTAAAAAACGCCTGGTTCTGCGGTTTGCCGGGCAACCCGGTGTCGGCGTTGGTGACATTTTATCAATTAGTg  >  1:205137/1‑251 (MQ=255)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                      
ATTAAATGCGATTTCCCTGCCGTTACTCGCCTCCCTTGGCATTGAAAACGTGAAGGTTTTCCCGCGTTTAAAAGTGGCGGTGCTTTCTACCGGTGATGAATTGGTGCCGGTGGGCAAACCGCTACAAACCGGGCAAATTTATGACAC‑CAACCGTTTCGCCGTGAAATTATTATTGGAAAAATTAAACTGCGAAGTGTTGGATTTCGGTATTTTGCCAGATAACG‑AGGCGCAATTTGAAAACACCTTTATTGAAGCGCAACAACAGGCGGATTTGGTGATTACCAGCGGCGGCGTTTCCGTGGGCGAAGCGGATTTCACCAAACATATTTTAGAGAAAGTGGGCAAAATCAATTTCTGGAAAATCGCCATTAAACCGGGTAAACCTTTTGCTTTCGGCAAATTAAAAAACGCCTGGTTCTGCGGTTTGCCGGGCAACCCGGTGTCGGCGTTGGTGACATTTTATCAATTAGTG  >  1/1593001‑1593472

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑