| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,590,301 | C→A | intergenic (‑145673/‑51463) | unknown ← / → unknown | tRNA‑Met‑CAT/tRNA‑Gly‑GCC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,590,301 | 0 | C | A | 94.2% | 123.8 / ‑4.7 | 52 | intergenic (‑145673/‑51463) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Gly‑GCC |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base A (23/26); minor base T (3/0); total (26/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
TCTTCTTTTCCCTAAATTTGAATAAAAGAAAAACCGTGGAATCCTCCGGATTCCACAGCGTAAATTAATCGGTTATGGCGGGAGAAAAGCATTTACTCCCGCGTATTCGCGTACTATTATTGTTCGTCTTTCAAAAAATAGCAACCTCAAGCACGGATCATGTATAAATTTTCACCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTCGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAACGGACAAACGTTCATGCTCCCCGCCAGCACGCAAAAAGTATTTACCGCTTTGGCGGCAAAATTGACGCTCGGCGATTCATTTCAATTTCAAACCGCACTTTTAACCAACGGCAAAGTACAAAACGGTCAACTCAACGGCGA > 1/1590065‑1590546 | tcttctTTTCCCTAAATTTGAATAAAAGAAAAACCGTGGAATCCTCCGGATTCCACAGCGTAAATTAATCGGTTATGGCGGGAGAAAAGCATTTACTCCCGCGTATTCGCGTACTATTATTGTTCGTCTTTCAAAAAATAGCAACCTCAAGCACGGATCATGTATAAATTTTCACCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAatat < 1:357484/251‑1 (MQ=255) cttcttTTCCCTAAATTTGAATAAAAGAAAAACCGTGGAATCCTCCGGATTCCACAGCGTAAATTAATCGGTTATGGCGGGAGAAAAGGATTTACTCCCGCGTATTTGCGTACTATTATTGTTTGTCTTTTAAAAAATAACAACCTCAAGCACGGGTCATGTATAAATTTTTTCCACGGCATATTTTTT‑AAGAAAAATTCTTATTTCTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGGAGTCAATAtt > 1:453951/1‑251 (MQ=255) ttCCCTAAATTTGAATAAAAGAAAAACCGTGGAATCCTCCGGATTCCACAGCGTAAATTAATCGGTTATGGCGGGAGAAAAACATTTACTCCCGCGTATTCGCGTACTATTATTGTTCTTCTTTCAAAAAATAGCAACCTCAAGCACGGATCATGTATAAATTTTCACCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAAt < 1:455483/251‑1 (MQ=255) cccTAAATTTGAATAAAAGAAAAACCGTGGAATCCTCCGGATTCCACAGCGTAAATTAATCGGTTATGGCGGGAGAAAAGCATTTACTCCCGCGTATTCGCGTACTATTATTGTTCGTCTTTAAAAAAATAGCAACCTCAAGCACGGATCATGTATAAATTTTCACCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCg < 1:208517/232‑1 (MQ=255) ccTAAATTTGAATAAAAGAAAAACCGTGGAATCCTCCGGATTCCACAGCGTAAATTAATCGGTTATGGCGGGAGAAAAGCATTTACTCCCGCGTATTCGCGTACTATTATTGTTCGTCTTTCAAAAAATAGCAACCTCAAGCACGGATCATGTATAAATTTTCCCCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTac < 1:2583/251‑1 (MQ=255) aTCCTCCGGATTCCACAGCGTAAATTAATCGGTTATGGCGGGAGAAAAGCATTTTCTCCCCCGTATTCGCGTACTATTATTGTTCGTCTTTCAAAAAATAACAAACTCAAGCACGGATCATGTATAAATTTTCTCCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCCTCGCCACCCCCTCTTTTGCCGAAGTCAATATTTCCAATTACACCGCCAATCTTCCCCAGGGGGCAAAtttt > 1:537319/1‑250 (MQ=255) aTCCTCCGGATTCCACAGCGTAAATTAATCGGTTATGGCGGGAGAAAAGCATTTACTCCCGCGTATTCGCGTACTATTATTGTTCGTCTTTCAAAAAATAACAACCTCAAGCACGGATCATGTATAAATTTTCACCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCCCCCCCCCTTTAGCCGAAGTCAatat > 1:747673/1‑211 (MQ=255) cctccGGATTCCACAGCGTAAATTAATCGGTTATGGCGGGAGAAAAGCATTTACTCCCGCGTATTTTCGGACTATTATTGTTTGTCTTTCAAAAAAAAGCAACCTCAAGCACGGATCATGTATAAATTTTTACCCCGTCATATTTTTC‑AAGAAACATTTTTATTACTCAGCCCCGGCATCTCCACCCCCTCTTTTTCCGAAGTCAATATTGCCAATTACACCGCCAATCTTcccccttctcttttacacat > 1:288774/1‑234 (MQ=255) ctccGGATTCCACAGCGTAAATTAATCGGTTATGGCGGGAGAAAAGCATTTCCTCCCGCGTATTCGCGTACTATTATTGTTCGTCTTTCAAAAAATAGCAACCTCAAGCCCGGATCATGTATAAATTTTCCCCACGTCATATTTTTC‑AAGAAACATTCTTATTCCTCACCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCa < 1:747646/251‑1 (MQ=255) ggATTCCACAGCGTAAATTAATCGGTTATGGCGGGAGAAAAACATTTACTCCCGCGTATTCGCGTACTATTATTGTTCGTTTTTCAAAAAATAGCCACCCCAAACACGGAGCAAGTATAAATTTTTACCACGTCATAATTTTC‑AAGAAACATTTTTTTTTTTCCGCCCCGGCATCGCCACCGCCTCTTTACCCGAAGACAATATTGCCAATTACACCGCCAAACTTCCCAAAGGGGCAAATTTGGCAttta > 1:569521/1‑249 (MQ=255) gCGTAAATTAATCGGTTATGGCGGGAGAAAAGCATTTACTCCCGCGTATTCGCGTACTATTATTGTTCGTCTTTCAAAAAATAGCAACCTCAAGCACGGATCATGTATAAATTTTTACCACGTCATATTTTTT‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCCCTTTAGCCGAAGGCAATATTGCCAATTACACCCCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCaaaaa > 1:258931/1‑251 (MQ=255) gCGTAAATTAATCGGTTATGGCGGGAGAAAAGCATTTACTCCCCCGCATTTGCGTTCTATTATTGTTCGCCTTTCAAAAAATAGCAACCTCAAACACGGATCATGTATAAATTTTCACCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCCGCATCGCCACCCCCTCTTTAGCCGAAGTCAATATTTCCAATTTCACCCCCCATCTTCCCCAGGGGGCAAATTTGGCATTCATCGCCaaaaa > 1:663543/1‑251 (MQ=255) gCGTAAATTAATCGGTTATGGCGGGAGAAAAACATTTTCTCCCGCGTATTCGCGTACTATTATTGTTCGTCTTTCAAAAAATAGCAAACTCAAGCACGGATCATGTATAAATTTTTACCACGTCATATTTTTC‑AAGAAACAATCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTTGCCGAAGTCAATATTTCCAATTACACCGCCCATCTTCCCAAGGGGGCCAATTTGGCATTCATTGCCaaaaa > 1:88300/1‑251 (MQ=255) tAATCGTTTATGGGGGGAAAAAAGCATTTACCCCCGCGTATTCGCGTACTATTATTGTTCTTCTTTAAAAAAATAGCACCCTCAAGCACGGATCATTTATAAATTTTCCCCACGTCAT‑TTTTTCAAAGAAACATTTTTATTCCTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACatcaatc < 1:399271/251‑1 (MQ=255) ggTTATGGCGGGAGAAAAGCTTTTACTCCCGCGTATTCGCGTACTATTATTGTTCGTCTTTCAAAAAATAGCAACCTCAAGCACGGATCATGTATAAATTTTCCCCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTac < 1:712587/191‑1 (MQ=255) tGGCGGGAGAAAAGCATTTACTCCCGCGTATTCGCGTACTATTATTGTTCGTCTTTCAAAAAATAGCAACCTCAAGCACGGATCATGTATAAATTTTCCCCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACAt < 1:624446/251‑1 (MQ=255) ggggggAAAAAAGCATTTACCCCCGCGTATTCGCGTACTATTATTGTTCGTTTTTCAAAAAATAACAACCTCAAGCCCGGATCATGTATAAATTTTCCCCACGTCATATTTTTC‑AAAAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACAt < 1:334398/247‑1 (MQ=255) ggCGGGAAAAAAGCATTTACTCCCGCGTATTCGCGTACTATTATTGTTCGTCTTTCAAAAAATAGAAACCTCAAGCACGGATCATGTATAAATTTTCCCCCCGTCATTTTTTTC‑AAGAAACATTCTTATTACTCACCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACAt < 1:337992/250‑1 (MQ=255) gaAAAGCATTTACTCCCGCGTATTCGCGTACTATTATTGTTCGTCTTTCAAAAAATAGCAACCTCAAGCACGGATCATGTATAAATTTTCACCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCg > 1:129020/1‑251 (MQ=255) cATTTACTCCCGCGTATTCGCGTACTATTATTGTTCGTCTTTCAAAAAATAGCAACCTCAAGCACGGATCATGTATAAATTTTCACCACGTCATATTTTTC‑AAAAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAAc < 1:297233/235‑1 (MQ=255) cATTTACCCCCGCGTATTCGCGTACTATTATTGTTCGTCTTTCAAAAAATAGCAACCTCAAGCACGGATCATGTATAAACTTTCCCCACGTCATATTTTTC‑AAGAAACATTCTTATTCCTCACCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATta < 1:430871/249‑1 (MQ=255) tttACTCCCGCGTATTCGCGTACTATTATTGTTCTTTTTTCAAAAAATAGCAACCTCAAGCACGGATCATGTATAAATTTTTCCCACTTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCCCCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAAc < 1:443121/251‑1 (MQ=255) tttACCCCCGCGTATTCGCGTACTATTATTTTTCGTCTTTAAAAAAATAGCACCCTCAAGCACGGATCATGTATAAATTTTCTCCTCGCAATATTTTTA‑AAGAATCATTCTTATTCCTCAGCCTCGTCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAAc < 1:51366/251‑1 (MQ=255) gcgTATTCGCGTACTATTATTGTTCGTCTTTCAAAAAATAGCAACCTCAAGCACGGATCATGTATAAATTTTCACCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCAt > 1:782492/1‑195 (MQ=255) tACTATTATTGTTCGTCTTTCAAAAAATAGCAACCTCAAGCACGGATCATGTATAAATTTTCACCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGAGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAACGGACAAACGTTCATGCTcc > 1:425690/1‑250 (MQ=255) cTATTATTGTTCGTCTTTCAAAAAATAGCAACCTCAAGCACGGATCATGTATAAATTTTCACCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAg > 1:306647/1‑166 (MQ=255) tttattGTTCGTCTTTAAAAAAATAGCAACCTCAAGCACGAATCATTTATAAATTTTCCCCCCGTCATTTTTTCC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAACGGACAAACGTTCATGCTCCCCGcc < 1:391592/250‑1 (MQ=255) attattGTTCTTCTTTCAAAAAATAGCAACCTCAAGCACGGATCATGTATAAATTTCCACCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAAc < 1:415375/209‑1 (MQ=255) attattGTTCGTCTTTCAAAAAATAGCAACCTCAAGCACGGATCATGTATAAATTTTCACCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAACGGACAAACGTTCATGCTCCCCGc > 1:793214/1‑250 (MQ=255) attattGTTCGTCTTTCAAAAAATAGCAACCCCAAGCACGGATCATGTATAAATTTTCACCACGTCATTTTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAACgg < 1:595726/229‑1 (MQ=255) tattGTTCGTCTTTCAAAAAATAGCACCCTCAGGCACGGATCATTTATAAATTTTCCCCACGTCATATTTTTC‑AAGAAACATTCTTATTCCTCAGCCTGGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAACGGACAAACGTTCATGCTCCCCGCCAg < 1:728557/251‑1 (MQ=255) gTTCGTCTTTAAAAAAATAGCACCCTCAAGCACGGATCATGTATAAATTTTCCCCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAACGGACAAACGTTCATGCTCCCCGCCAg < 1:367084/247‑1 (MQ=255) ttCAAAAAATAGCAACCTCAAGCACGGATCATGTATAAATTTTCACCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAACGGACAAACGTTCATGCTCCCCGCCAGCACGCAAAAAg > 1:484662/1‑250 (MQ=255) ccTCAAGCACGGATCATGTATAAATTTTCACCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTac < 1:91004/117‑1 (MQ=255) ccTCAAGCACGAATCATGTATAAATTTTCACCCCGTCATTTTTTTC‑AAGAAACATTCTTATTCCTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAAc < 1:478714/180‑1 (MQ=255) cTCAAGCACGGATCATGTATAAATTTTCACCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTac < 1:121449/116‑1 (MQ=255) aGCACGGATCATGTATAAATTTTCACCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAatat < 1:258756/102‑1 (MQ=255) gATCATGTATAAATTTTCACCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAACGGACAAACGTTCATGCTCCCCGCCAGCACGCAAAAAGTATTTACCGCTTTGGCGGCAAAATTgg > 1:33745/1‑250 (MQ=255) aTGTATAAATTTTCACCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAACGGACAAACGTTCATGCTCCCCGCCAGCACGCAAAAAGTATTTACCGCTTTGGCGGCAAAATTggcg > 1:559857/1‑246 (MQ=255) gTATAAATTTTCACCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAACGGACAAACGTTCATGCTCCCCGCCAGCACGCAAAAAGTATTTACCGCTTTGGCGGCAAAATTGGCGCTCg > 1:109958/1‑251 (MQ=255) gAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAACGGACAAACGTTCATGCTCCCCGCCAGCACGCAAAAAGTATTTACCGCTTTGGCGGCAAAATTGGCGCTCGGCGATTCATTTCAATTTCAAACCg > 1:554126/1‑244 (MQ=255) ttCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAg > 1:688329/1‑81 (MQ=255) ttCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAACGGACAAACGTTCATGCTCCCCGCCAGCACGCAAAAAGTATTTACCGCTTTGGCGGCAAAATTGGCGCTCGGCGATTCATTTCAATTTCAAACCGCACTTTTAAcc > 1:585893/1‑249 (MQ=255) tCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAAc > 1:26842/1‑143 (MQ=255) tCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAACGGACAAACGTTCATGCTCCCCGCCAGCACGCAAAAAGTATTTACCGCTTTGGCGGCAAAATTGGCGCTCGGCGATTCATTTCAATTTCAAACCGCACTTTTAACCaa > 1:389941/1‑250 (MQ=255) tttttccccccccccgccttcccccccGCCTCTTTAGCCGAAGTCAATATTGCCAATTACCCCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAACGGACAAACGTTCATGCTCCCCGCCAGCACGCAAAAAGTATTTACCGCTTTGGCGGCAAAATTGGCGCTCGGCGATTCATTTCAATTTCAAACCGCACTTTTAACCAACgg < 1:703564/226‑1 (MQ=255) gCCTCGGCATCGCCACCGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAACGGACAAACGTTCATGCTCCCCGCCAGCACGCAAAAAGTATTTACCGCTTTGGCGGCAAAATTGGCGCTCGGCGATTCatttcaattt > 1:80569/1‑218 (MQ=255) ccgactccccccccGCCTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAACGGACAAACGTTCATGCTCCCCGCCAGCACGCAAAAAGTATTTACCGCTTTGGCGGCAAAATTGGCGCTCGGCGATTCATTTCAATTTCAAACCGCACTTTTAACCAACGGCAAAGTACAAAAc < 1:373499/239‑1 (MQ=255) ccTCTTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAACGGACAAACGTTCATGCTCCCCGCCAGCACGCAAAAAGTa > 1:857950/1‑152 (MQ=255) tctTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAACGGACAAACGTTCATGCTCCCCGCCAGCACGCAAAAAGTATTTACCGCTTTGGCGGCAAAATTGGCGCTCGGCGATTCatttc > 1:333028/1‑193 (MQ=255) tctTTAGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAACGGACAAACGTTCATGCTCCCCGCCAGCACGCAAAAAGTATTTACCGCTTTGGCGGCAAAATTGGCGCTCGGCGATTCATTTCAATTTCAAACCGCACTTTTAACCAACGGCAAAGTACAAAACGGTCAACTCAACGGCGa > 1:836173/1‑251 (MQ=255) ctTTAGCCGAAGTAAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAACGGACAAACGTTCATGCTCCCCGCCAGCACGCAAAAAGTATTTACCGCTTTGGCGGCAAAATTGGCGCTCGGCGATTCATTTCAATTTCAAACCGCACTTTTAACCAACGGCAAAGTACAAAAc < 1:417647/233‑1 (MQ=255) | TCTTCTTTTCCCTAAATTTGAATAAAAGAAAAACCGTGGAATCCTCCGGATTCCACAGCGTAAATTAATCGGTTATGGCGGGAGAAAAGCATTTACTCCCGCGTATTCGCGTACTATTATTGTTCGTCTTTCAAAAAATAGCAACCTCAAGCACGGATCATGTATAAATTTTCACCACGTCATATTTTTC‑AAGAAACATTCTTATTACTCAGCCTCGGCATCGCCACCGCCTCTTTCGCCGAAGTCAATATTGCCAATTACACCGCCAATCTTCCCAAGGGGGCAAATTTGGCATTCATCGCCAAAAACATCAATCAAGATAACATTATCGCCGATTATAACGGACAAACGTTCATGCTCCCCGCCAGCACGCAAAAAGTATTTACCGCTTTGGCGGCAAAATTGACGCTCGGCGATTCATTTCAATTTCAAACCGCACTTTTAACCAACGGCAAAGTACAAAACGGTCAACTCAACGGCGA > 1/1590065‑1590546 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |