Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,589,083 C→T intergenic (‑144455/‑52681) unknown ← / → unknown tRNA‑Met‑CAT/tRNA‑Gly‑GCC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,589,0830CT100.0% 205.9 / NA 77intergenic (‑144455/‑52681)unknown/unknowntRNA‑Met‑CAT/tRNA‑Gly‑GCC
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (34/43);  total (34/43)

CCATTTTGATTTTTCAGATAAACCCGATACCCCTGACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGCCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCGAAATAAATATTGCATTAGAATCAGCCATCAATTTTTTCAAAGAGATTATTATGTCAATTACATTATCAACCAAACAAAAACAGTATCTAAAAGGACTGGCCCATCATTTAAGCCCGGTGGTGATGCTCGGTGGCAATGGTTTAACGGAAGGCGTGCTGGCAGAAA  >  1/1588840‑1589327
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                    
ccATTTTGATTTTTCAGATAAACCCGATACCCCTGACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGc                                                                                                                                                                                                                                               <  1:92538/251‑1 (MQ=255)
ccATTTTGATTTTTCAGATAAACCCGATACCCCTGACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGc                                                                                                                                                                                                                                               <  1:870104/251‑1 (MQ=255)
  aTTTTGATTTTTCAGATAAACCCGATACCCCTGACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCtt                                                                                                                                                                                                                                             <  1:689979/251‑1 (MQ=255)
        aTTTTTCAGATAAACCCGATACCCCTGACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAg                                                                                                                                                                                                                                        <  1:310862/250‑1 (MQ=255)
        aTTTTTCAGATAAACCCGATACCCCTGACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAg                                                                                                                                                                                                                                        <  1:664107/250‑1 (MQ=255)
        aTTTTTCAGATAAACCCGATACCCCTGACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAg                                                                                                                                                                                                                                        <  1:320977/250‑1 (MQ=255)
           tttCAGATAAACCCGATACCCCTGACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAgtgt                                                                                                                                                                                                                                     >  1:706514/1‑250 (MQ=255)
               aGATAAACCCGATACCCCTGACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGt                                                                                                                                                                                                                                >  1:530138/1‑251 (MQ=255)
                 aTAAACCCGATACCCCTGACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGt                                                                                                                                                                                                                                <  1:537274/249‑1 (MQ=255)
                 aTAAACCCGATACCCCTGACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGt                                                                                                                                                                                                                                <  1:308245/249‑1 (MQ=255)
                 aTAAACCCGATACCCCTGACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGt                                                                                                                                                                                                                                <  1:646450/249‑1 (MQ=255)
                   aaaCCCGATACCCCTGACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAg                                                                                                                                                                                                                                        >  1:571546/1‑239 (MQ=255)
                   aaaCCCGATACCCCTGACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAg                                                                                                                                                                                                                            <  1:678314/251‑1 (MQ=255)
                      cccGATACCCCTGACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTa                                                                                                                                                                                                                         >  1:755407/1‑251 (MQ=255)
                      cccGATACCCCTGACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTa                                                                                                                                                                                                                         <  1:325950/251‑1 (MQ=255)
                             ccccTGACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCttt                                                                                                                                                                                                                                                  >  1:734516/1‑219 (MQ=255)
                             ccccTGACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCtt                                                                                                                                                                                                                                             <  1:315411/224‑1 (MQ=255)
                             ccccTGACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAg                                                                                                                                                                                                                                        >  1:810091/1‑229 (MQ=255)
                             ccccTGACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACttt                                                                                                                                                                                                                  >  1:580487/1‑251 (MQ=255)
                                cTGACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTAcc                                                                                                                                                                                                               <  1:723033/251‑1 (MQ=255)
                                  gACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGT‑TTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCttt                                                                                                                                                                                                            >  1:659592/1‑251 (MQ=255)
                                   aCCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAacac                                                                                                                                                                                                                     >  1:59671/1‑242 (MQ=255)
                                   aCCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAacac                                                                                                                                                                                                                     <  1:275192/242‑1 (MQ=255)
                                      tttATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATc                                                                                                                                                                                                         <  1:506051/251‑1 (MQ=255)
                                       ttATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAg                                                                                                                                                                                                                                        >  1:160799/1‑219 (MQ=255)
                                       ttATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTAcc                                                                                                                                                                                                               >  1:208618/1‑244 (MQ=255)
                                       ttATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCATGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAg                                                                                                                                                                                                                                        >  1:107439/1‑219 (MQ=255)
                                                cGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGt                                                                                                                                                                                               <  1:481325/251‑1 (MQ=255)
                                                cGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGt                                                                                                                                                                                               <  1:635098/251‑1 (MQ=255)
                                                  cATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGtt                                                                                                                                                                                              <  1:724173/250‑1 (MQ=255)
                                                    tttCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTAcc                                                                                                                                                                                                               >  1:775612/1‑231 (MQ=255)
                                                    tttCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGt                                                                                                                                                                                               >  1:228/1‑247 (MQ=255)
                                                    tttCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCtt                                                                                                                                                                                           >  1:365429/1‑251 (MQ=255)
                                                       cAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGta                                                                                                                                                                                                                               >  1:770951/1‑212 (MQ=255)
                                                       cAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCa                                                                                                                                                                                        >  1:432122/1‑251 (MQ=255)
                                                                cGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATAtg                                                                                                                                                                               <  1:409393/251‑1 (MQ=255)
                                                                  tCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATAtgtt                                                                                                                                                                             <  1:394093/251‑1 (MQ=255)
                                                                   cATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATAtgttg                                                                                                                                                                            <  1:171570/251‑1 (MQ=255)
                                                                        aCGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCg                                                                                                                                                                       <  1:748170/251‑1 (MQ=255)
                                                                           cTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGc                                                                                                                                                                                                                                               >  1:368220/1‑176 (MQ=255)
                                                                             ttttAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAg                                                                                                                                                                                                                                        <  1:103116/181‑1 (MQ=255)
                                                                             ttttAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCGaaata                                                                                                                                                                  >  1:491366/1‑251 (MQ=255)
                                                                                 aaaTCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCGAaataaata                                                                                                                                                              <  1:738106/251‑1 (MQ=255)
                                                                                         gAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTAcc                                                                                                                                                                                                               >  1:125315/1‑194 (MQ=255)
                                                                                          aaaTTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAg                                                                                                                                                                                                                                        <  1:444574/168‑1 (MQ=255)
                                                                                            aTTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCGAAATAAATATTGCATTAGaa                                                                                                                                                   <  1:833048/251‑1 (MQ=255)
                                                                                             ttACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGt                                                                                                                                                                                                                           <  1:799176/178‑1 (MQ=255)
                                                                                             ttACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGt                                                                                                                                                                                               <  1:30377/206‑1 (MQ=255)
                                                                                                   aaCTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCttt                                                                                                                                                                                          >  1:818104/1‑205 (MQ=255)
                                                                                                     cTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCttt                                                                                                                                                                                                                                                  >  1:371943/1‑147 (MQ=255)
                                                                                                              tttAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGtt                                                                                                                                                                                                                          <  1:793360/162‑1 (MQ=255)
                                                                                                                        gCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAac                                                                                                                                                                                                                       <  1:480218/155‑1 (MQ=255)
                                                                                                                              aTTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCGAAATAAATATTGCATTAGAATCAGCCATCAATTTTTTCAAAGAGATTATTATg                                                                                                                  <  1:56905/250‑1 (MQ=255)
                                                                                                                              aTTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCGAAATAAATATTGCATTAGAATCAGCCATCAATTTTTTCAAAGAGATTATTATGt                                                                                                                 <  1:488139/251‑1 (MQ=255)
                                                                                                                                     cTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCGAAATAAATATTGCATTAGAATCAGCCATCAATTTTTTCAAAGAGATTATTATGTCAATTAc                                                                                                          <  1:458904/251‑1 (MQ=255)
                                                                                                                                          gCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTa                                                                                                                                                                                                                         >  1:401618/1‑135 (MQ=255)
                                                                                                                                          gCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTa                                                                                                                                                                                                                         <  1:182500/135‑1 (MQ=255)
                                                                                                                                                 ggTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATc                                                                                                                                                                                                         <  1:362200/144‑1 (MQ=255)
                                                                                                                                                            ttcttcAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCGAAATAAATATTGCATTAGAATCAGCCATCAATTTTTTCAAAGAGATTATTATGTCAATTACATTATCAACCAAACAAAAAc                                                                                      <  1:339307/248‑1 (MQ=255)
                                                                                                                                                                          atcaAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCt                                                                                                                                                                                                              >  1:324005/1‑114 (MQ=255)
                                                                                                                                                                              aaaagaaaagTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCGAAATAAATATTGCATTAGAATCAGCCATCAATTTTTTCAAAGAGATTATTATg                                                                                                                  <  1:333642/202‑1 (MQ=255)
                                                                                                                                                                                        tcgtcTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCGAAATAAATATTGCATTAGAATCAGCCATCAATTTTTTCAAAGAGATTATTATGTCAATTACATTATCAACCAAACAAAAACAGTATCTAAAAGGACTGGCCCATCATTTAAg                                                       <  1:575449/251‑1 (MQ=255)
                                                                                                                                                                                         cgtcTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCGAAATAAATATTGCATTAGAATCAGCCATCAATTTTTTCAAAGAGATTATTATGTCAATTACATTATCAACCAAACAAAAACAGTATCTAAAAGGACTGGCCCATCATTTAAGc                                                      <  1:450342/251‑1 (MQ=255)
                                                                                                                                                                                                  ttGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCGAAATAAATATTGCATTAGaa                                                                                                                                                   <  1:613844/149‑1 (MQ=255)
                                                                                                                                                                                                          tcatTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCGAAATAAATATTGCATTAGAATCAGCCATCAATTTTTTCAAAGAGATTATTATGTCAATTACATTATCAACCAAACAAAAACAGTATCTAAAAGGACTGGCCCATCATTTAAGCCCGGTGGTGATGCt                                        <  1:179696/248‑1 (MQ=255)
                                                                                                                                                                                                               gAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGc                                                                                                                                                                                                                                               <  1:499994/44‑1 (MQ=255)
                                                                                                                                                                                                               gAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACAt                                                                                                                                                                                                    >  1:500517/1‑87 (MQ=255)
                                                                                                                                                                                                                        gTCGTTATTTGTTTCGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCGAAATAAATATTGCATTAGAATCAGCCATCAATTTTTTCAAAGAGATTATTATGTCAATTACATTATCAACCAAACAAAAACAGTATCTAAAAGGACTGGCCCATCATTTAAGCCCGGTGGTGATGCTCGGTGGCAATGGTTTaa                       >  1:32910/1‑251 (MQ=255)
                                                                                                                                                                                                                                      cGCCTAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCGAAATAAATATTGCATTAGAATCAGCCATCAATTTTTTCAAAGAGATTATTATGTCAATTACAt                                                                                                        >  1:436830/1‑156 (MQ=255)
                                                                                                                                                                                                                                          tAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACCTAAGGTTCTTTCACCCGATATGTTGTATCGAAATAAATATTTCATTAGAATCACCCATCAATTTTTTCAAAGAGCTTATTATGTCAATTACATTATCAACCAAACAAAAACAGTATCTAAAAGTACTGGCCCATCATTTAAGCCCGGTTGTGATGCTCGGTGGCAATGGTTTAACGGAAGGCGTGCTGGCAg     >  1:781821/1‑251 (MQ=255)
                                                                                                                                                                                                                                          tAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCGAAATAAATATTGCATTAGAATCAGCCATCAATTTTTTCAAAGAGATTATTATGTCAATTACATTATCAACCAAACAAAAACAGTATCTAAAAGGACTGGCCCATCATTTAAGCCCGGTGGTGATGCTCGGTGGCAATGGTTTAACGGAAGGCGTGCTGGCAg     >  1:766150/1‑251 (MQ=255)
                                                                                                                                                                                                                                          tAAGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCGAAATAAATATTGCATTAGAATCAGCCATCAATTTTTTCAAAGAGATTATTATGTCAATTACATTATCAACCAAACAAAAACAGTATCTAAAAGGACTGGCCCATCATTTAAGCCCGGTGGTGATGCTCGGTGGCAATGGTTTAACGGAAGGCGTGCTGGCAg     >  1:875394/1‑251 (MQ=255)
                                                                                                                                                                                                                                           aaGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCGAAATAAATATTGCATTAGAATCAGCCATCAATTTTTTCAAAGAGATTATTATGTCAATTACATTATCAAc                                                                                                 >  1:353603/1‑158 (MQ=255)
                                                                                                                                                                                                                                            aGTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCGAAATAAATATTGCATTAGAATCAGCCATCAATTTTTTCAAAGAGATTATTATGTCAATTACATTATCAACCAAACAAAAACAGTATCTAAAAGGACTGGCCCATCATTTAAGcc                                                     >  1:547019/1‑201 (MQ=255)
                                                                                                                                                                                                                                             gTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTc                                                                                                                                                                                         >  1:536890/1‑68 (MQ=255)
                                                                                                                                                                                                                                             gTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCGAAATAAATATTGCATTAGAATCAGCCATCAATTTTTTCAAAGAGATTATTATGTCAATTACATTATCAACCAAACAAAAACAGTATCTAAAAg                                                                          <  1:780595/179‑1 (MQ=255)
                                                                                                                                                                                                                                             gTATAGTCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCGAAATAAATATTGCATTAGAATCAGCCATCAATTTTTTCAAAGAGATTATTATGTCAATTACATTATCAACCAAACAAAAACAGTATCTAAAAGGACTGGCCCATCATTTAAGCCCGGTGGTGATGCTCGGTGGCAATGGTTTAACGGAAGGCGTGCTGGCAGaaa  >  1:124638/1‑251 (MQ=255)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                    
CCATTTTGATTTTTCAGATAAACCCGATACCCCTGACCTTTATCAATCCGCATTTCAAATATGCCGTCATTAACGCTTTTTAAATCACCGAAATTACCAAACTGTAACCGTTTAATTCGTGCGTTGATTTTTGCTTTAGCTCTTAGGTTTTTGAGTTTCTTCAACCATTCATCAAAAAGAAAAGTCGTCTTAATTTGTATCATCATTGAATTAATTGTCGTTATTTGTTTCGCCTAAGTATAGCCTTTAGCTTAAAAGTGTCAAGTATAGTTAACACTTTACCTTTATCAACATAAGGTTCTTTCACCCGATATGTTGTATCGAAATAAATATTGCATTAGAATCAGCCATCAATTTTTTCAAAGAGATTATTATGTCAATTACATTATCAACCAAACAAAAACAGTATCTAAAAGGACTGGCCCATCATTTAAGCCCGGTGGTGATGCTCGGTGGCAATGGTTTAACGGAAGGCGTGCTGGCAGAAA  >  1/1588840‑1589327

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑