| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,585,587 | T→C | intergenic (‑140959/‑56177) | unknown ← / → unknown | tRNA‑Met‑CAT/tRNA‑Gly‑GCC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,585,587 | 0 | T | C | 100.0% | 220.2 / NA | 79 | intergenic (‑140959/‑56177) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Gly‑GCC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (39/40); total (39/40) | |||||||||||
ATTCTGACCATTCCGTTTCCTCTAACGGAATTTGCGCCACGCTTTTGTTGTTGAATCGAATGCCCTGTTCTTCGCTAAAAGGGAAAAGTTCGACCACAGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCATGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGAAAAAGCTCGCCTGTTTCGTGCTGCCCACCAGCCATCTGTTAAGCCTGAAAAAAGCGGCAAAAGCC > 1/1585340‑1585832 | aTTCTGACCATTCCGTTTCCTCTAACGGAATTTGCGCCACGCTTTTGTTGTTGAATCGAATGCCCTGTTCTTCGCTAAAAGGGAAAAGTTCGACCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAg > 1:550109/1‑251 (MQ=255) ccATTCCGTTTCCTCTAACGGAATTTGCGCCACGCTTTTGTTGTTGAATCGAATGCCCTGTTCTTCGCTAAAAGGGAAAAGTTCGACCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATAc < 1:172463/251‑1 (MQ=255) aTTCCGTTTCCTCTAACGGAATTTGCGCCACGCTTTTGTTGTTGAATCGAATGCCCTGTTCTTCGCTAAAAGGGAAAAGTTCGACCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACaa < 1:337167/251‑1 (MQ=255) aTTCCGTTTCCTCTAACGGAATTTGCGCCACGCTTTTGTTGTTGAATCGAATGCCCTGTTCTTCGCTAAAAGGGAAAAGTTCGACCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACaa < 1:151910/251‑1 (MQ=255) ttCCGTTTCCTCTAACGGAATTTGCGCCACGCTTTTGTTGTTGAATCGAATGCCCTGTTCTTCGCTAAAAGGGAAAAGTTCGACCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACaa < 1:689667/250‑1 (MQ=255) ttCCG‑TTCCTCTAACGGAATTTGCGCCACGCTTTTGTTGTTGAATCGAATGCCCTGTTCTTCGCTAAAAGGGAAAAGTTCGACCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATg < 1:87408/251‑1 (MQ=255) ctAACGGAATTTGCGCCACGCTTTTGTTGTTGAATCGAATGCCCTGTTCTTCGCTAAAAGGGAAAAGTTCGACCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGac > 1:709487/1‑243 (MQ=255) ctAACGGAATTTGCGCCACGCTTTTGTTGTTGAATCGAATGCCCTGTTCTTCGCTAAAAGGGAAAAGTTCGACCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGa < 1:777614/251‑1 (MQ=255) gAATTTGCGCCACGCTTTTGTTGTTGAATCGAATGCCCTGTTCTTCGCTAAAAGGGAAAAGTTCGACCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGAc < 1:205274/250‑1 (MQ=255) gttgAATCGAATGCCCTGTTCTTCGCTAAAAGGGAAAAGTTCGACCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATAc < 1:14411/209‑1 (MQ=255) gttgAATCGAATGCCCTGTTCTTCGCTAAAAGGGAAAAGTTCGACCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATAc > 1:670927/1‑209 (MQ=255) cGAATGCCCTGTTCTTCGCTAAAAGGGAAAAGTTCGACCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCAc > 1:327889/1‑250 (MQ=255) gAATGCCCTGTTCTTCGCTAAAAGGGAAAAGTTCGACCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTc < 1:157982/241‑1 (MQ=255) gCCCTGTTCTTCGCTAAAAGGGAAAAGTTCGACCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTAca > 1:619272/1‑251 (MQ=255) ccTGTTCTTCGCTAAAAGGGAAAAGTTCGACCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTAcatc < 1:804384/251‑1 (MQ=255) ttcGCTAAAAGGGAAAAGTTCGACCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTATCACCTTACATCATTACGa < 1:178343/251‑1 (MQ=255) tcGCTAAAAGGGAAAAGTTCGACCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGAt < 1:567973/251‑1 (MQ=255) tcGCTAAAAGGGAAAAGTTCGACCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGAt < 1:267537/251‑1 (MQ=255) cGCTAAAAGGGAAAAGTTCGACCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGAt > 1:345475/1‑250 (MQ=255) aaGTTCGACCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGacaa > 1:113388/1‑251 (MQ=255) ttCGACCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGacaac < 1:812276/249‑1 (MQ=255) aCCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCAt > 1:88007/1‑251 (MQ=255) aCCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCAt > 1:231739/1‑251 (MQ=255) aCCACGGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCAt > 1:802556/1‑251 (MQ=255) gacagGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCgg > 1:648159/1‑250 (MQ=255) gggTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATg > 1:606653/1‑251 (MQ=255) ggTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGacac < 1:863594/163‑1 (MQ=255) ctcAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAg > 1:623500/1‑250 (MQ=255) tGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTAc < 1:418319/208‑1 (MQ=255) ggCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAAGTCGGCGACCAGGGCGATATTGAATCTGGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTGTACTGAAGTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAg < 1:605950/184‑1 (MQ=255) aaaCTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGac > 1:272674/1‑148 (MQ=255) aaaCTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGAc < 1:175553/161‑1 (MQ=255) gctctgctcCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTAcatca > 1:225898/1‑194 (MQ=255) gctctgctcCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGaca < 1:196305/214‑1 (MQ=255) gctcCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGc < 1:268607/164‑1 (MQ=255) gctcCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATaa > 1:622992/1‑251 (MQ=255) ccAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAAt > 1:111205/1‑250 (MQ=255) ttCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAg < 1:92462/251‑1 (MQ=255) cGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACtt > 1:636326/1‑251 (MQ=255) ttCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGa > 1:585716/1‑251 (MQ=255) atatTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTAcatc < 1:483806/135‑1 (MQ=255) atatTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTAc < 1:524943/140‑1 (MQ=255) atatTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACt < 1:36567/221‑1 (MQ=255) atatTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTAt > 1:219759/1‑225 (MQ=255) atatTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGaaa > 1:782183/1‑251 (MQ=255) atatTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGaaa > 1:606435/1‑251 (MQ=255) atTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACaa < 1:504691/79‑1 (MQ=255) atTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGac < 1:388064/83‑1 (MQ=255) atTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCt > 1:444855/1‑127 (MQ=255) atTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGacaa < 1:33454/155‑1 (MQ=255) atTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGaaaaa > 1:792820/1‑251 (MQ=255) atTTAATCTTGTACTCATTTTTCTCTCCGCAGCAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGaaaaa > 1:76344/1‑251 (MQ=255) aTCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAACACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATc < 1:449726/239‑1 (MQ=255) cTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGAAAAAGCTCGc > 1:23859/1‑250 (MQ=255) cATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTc > 1:704419/1‑150 (MQ=255) cATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATc > 1:875346/1‑194 (MQ=255) tttttCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGAAAAAGCTCGCCTGTTTCGtgc < 1:27380/251‑1 (MQ=255) tttttCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGAAAAAGCTCGCCTGTTTCGtgc < 1:444267/251‑1 (MQ=255) ccGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGAAAAAGCTCGCCTGTTTCGTGCTGCccacca > 1:766796/1‑251 (MQ=255) cAGTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGa > 1:730882/1‑111 (MQ=255) gTAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGaca > 1:68613/1‑123 (MQ=255) tAAAATAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGAAAAAGCTCGCCTGTTTCGTGCTGCCCACCAGcc < 1:296738/248‑1 (MQ=255) aaaaTAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGAAAAAGCTTGCCTGTTTCGTGCTGCCCACCAGCCAt > 1:64650/1‑249 (MQ=255) aaaaTAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGAAAAAGCTCGCCTGTTTCGTGCTGCCCACCAGcc > 1:818150/1‑247 (MQ=255) aaaTAAACGGGCTCCATTTTACTGAATTATCACGAGCAAATACAATGACACCGGCGATTGACTTCTTGAAAAAGCAAAAAGCCCCTTTCACCTTACATCATTACGATCATGACCCGGACAACACCCATTTCGGCGATGAAGCTGCCGAGAAATTAGGCATAAATCCTGATCAATCTTTCAAGACCTTATTGGATGCGGCAAACGGCGATCAGAAAAATCTCGCCTGTTTCGTGCTGCCCACCAGctat > 1:292391/1‑245 (MQ=255) aaTAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGAAAAAGCTCGCCTGTTTCGTGCTGCCCACCAGCCAt > 1:165214/1‑247 (MQ=255) aaTAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGAAAAAGCTCGCCTGTTTCGTGCTGCCCACCAGCCATCTg < 1:611851/250‑1 (MQ=255) tAAACGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGAAAAAGCTCGCCTGTTTCGTGCTGCCCACCAGCCATCTGTTa < 1:636788/251‑1 (MQ=255) cGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGAAAAAGCTCGCCTGTTTCGTGCTGCCCACCAGCCATCTGTTAAGcc < 1:765505/251‑1 (MQ=255) cGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGAAAAAGCTCGCCTGTTTCGTGCTGCCCACCAGCCATCTGTTAAGcc < 1:488575/251‑1 (MQ=255) cGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGAAAAAGCTCGCCTGTTTCGTGCTGCCCACCAGCCATCTGTTAAGcc < 1:135224/251‑1 (MQ=255) cGGGCTCCATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGAAAAAGCTCGCCTGTTTCGTGCTGCCCACCAGCCATCTGTTAAGcc < 1:563513/251‑1 (MQ=255) ccATTTTACTGAATTATCACGAGGAAATACAATGacac > 1:219706/1‑38 (MQ=255) ccATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGAAAAAGCTCGCCTGTTTCGTGCTGCCCACCAGCCATCTGTTAAGCCTGaaaa > 1:746395/1‑251 (MQ=255) cATTTTACTGAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGAAAAAGCTCGCCTGTTTCGTGCTGCCCACCAGCCATCTGTTAAGCCTGaaaaa < 1:275315/251‑1 (MQ=255) aTTTTACTGAATTATCACGAGGAAATACAATGacac < 1:730258/36‑1 (MQ=255) gAATTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGAAAAAGCTCGCCTGTTTCGTGCTGCCCACCAGCCATCTGTTAAGCCTGAAAAAAGCGGCaaa > 1:501065/1‑251 (MQ=255) aTTATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGAAAAAGCTCGCCTGTTTCGTGCTGCCCACCAg > 1:772624/1‑219 (MQ=255) tATCACGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGAAAAAGCTCGCCTGTTTCGTGCTGCCCACCAGCCATCTGTTAAGCCTGAAAAAAGCGGCAAAAGcc < 1:594900/251‑1 (MQ=255) | ATTCTGACCATTCCGTTTCCTCTAACGGAATTTGCGCCACGCTTTTGTTGTTGAATCGAATGCCCTGTTCTTCGCTAAAAGGGAAAAGTTCGACCACAGACAGGGTCTCAATGGCTAAACTGCTCTGCTCCAACGCCTCCGCCAATTTCTCGCATAAATCGAATTCGGCGACCAGGGCGATATTTAATCTTGTACTCATTTTTCTCTCCGCAGTAAAATAAACGGGCTCCATTTTACTGAATTATCATGAGGAAATACAATGACACCGGCGATTGACTTATTGAAAAAGCAAAAAGTCCCTTTCACCTTACATCATTACGATCACGACCCGGACAACACCCATTTCGGCGATGAAGCCGCCGAGAAATTAGGCATAAATCCCGATCAATCTTTCAAGACTTTATTGGTTGCGGAAAACGGCGATCAGAAAAAGCTCGCCTGTTTCGTGCTGCCCACCAGCCATCTGTTAAGCCTGAAAAAAGCGGCAAAAGCC > 1/1585340‑1585832 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |