| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 340,969 | A→G | intergenic (‑73609/+3636) | unknown ← / ← unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 340,969 | 0 | A | G | 100.0% | 229.9 / NA | 81 | intergenic (‑73609/+3636) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (32/49); total (32/49) | |||||||||||
CTTTCGGTGCCGGGCAATCAGCCGCAATATTATGACAGCGCCATGTCGCGGGTGAAAGAAAAATACGGTTTTTGCGAACCGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTACCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGACACCCGATTTTAGGCGATAAATTCTACGCCCACCCACAAGCCAAAGCCCTCTCGCCCCGCTTATGCC > 1/340727‑341213 | cttTCGGTGCCGGGCAATCAGCCGCAATATTATGACAGCGCCATGTCGCGGGTGAAAGAAAAATACGGTTTTTGCGAACCGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCAt > 1:139438/1‑251 (MQ=255) gTGCCGGGCAATCAGCCGCAATATTATGACAGCGCCATGTCGCGGGTGAAAGAAAAATACGGTTTTTGCGAACCGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGa > 1:293095/1‑251 (MQ=255) tGCCGGGCAATCAGCCGCAATATTATGACAGCGCCATGTCGCGGGTGAAAGAAAAATACGGTTTTTGCGAACCGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGa < 1:765519/250‑1 (MQ=255) cAATCAGCCGCAATATTATGACAGCGCCATGTCGCGGGTGAAAGAAAAATACGGTTTTTGCGAACCGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGaaa < 1:71119/251‑1 (MQ=255) atatTATGACAGCGCCATGTCGCGGGTGAAAGAAAAATACGGTTTTTGCGAACCGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGc > 1:395049/1‑250 (MQ=255) tattatGACAGCGCCATGTCGCGGGTGAAAGAAAAATACGGTTTTTGCGAACCGGTACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCAtt < 1:449177/225‑1 (MQ=255) tattatGACAGCGCCATGTCGCGGGTGAAAGAAAAATACGGTTTTTGCGAACCGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAGACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCa > 1:795236/1‑251 (MQ=255) tattatGACAGCGCCATGTCGCGGGTGAAAGAAAAATACGGTTTTTGCGAACCGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTc < 1:712750/222‑1 (MQ=255) tattatGACAGCGCCATGTCGCGGGTGAAAGAAAAATACGGTTTTTGCGAACCGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCa > 1:549784/1‑251 (MQ=255) atGACAGCGCCATGTCGCGGGTGAAAGAAAAATACGGTTTTTGCGAACCGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGaaa < 1:400864/251‑1 (MQ=255) gcgcCATGTCGCGGGTGAAAGAAAAATACGGTTTTTGCGAACCGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTg > 1:763991/1‑250 (MQ=255) gcgcCATGTCGCGGGTGAAAGAAAAATACGGTTTTTGCGAACCGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTg > 1:347487/1‑250 (MQ=255) aaagaaaAATACGGTTTTTGCGAACCGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAag < 1:22632/251‑1 (MQ=255) aaagaaaAATACGGTTTTTGCGAACCGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAag < 1:751572/251‑1 (MQ=255) gaaaAATACGGTTTTTGCGAACCGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAagag > 1:628218/1‑250 (MQ=255) aaaaaTACGGTTTTTGCGAACCGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAagag < 1:888537/249‑1 (MQ=255) aaaaaTACGGTTTTTGCGAACCGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAagag < 1:156285/249‑1 (MQ=255) gTTTTTGCGAACCGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACtttt > 1:476628/1‑251 (MQ=255) tttGCGAACCGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTac < 1:268113/251‑1 (MQ=255) ttGCGAACCGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTacg < 1:587551/251‑1 (MQ=255) aaCCGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGt < 1:562200/250‑1 (MQ=255) ccGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTc < 1:228263/171‑1 (MQ=255) ccGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTacgac < 1:368230/238‑1 (MQ=255) ccGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGtt > 1:254085/1‑251 (MQ=255) cGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTa > 1:848527/1‑251 (MQ=255) ggACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAagag > 1:536779/1‑215 (MQ=255) cATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATa < 1:351423/251‑1 (MQ=255) aTGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATaa < 1:811745/251‑1 (MQ=255) ggCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAaca > 1:32317/1‑251 (MQ=255) cAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAacac < 1:124648/250‑1 (MQ=255) aaCCAGTGGCATTCTGCTGTTTGCCTTAAGCAAACCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAag < 1:449448/204‑1 (MQ=255) gCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACaccacc > 1:334601/1‑245 (MQ=255) ctgctgTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATaaaa > 1:208712/1‑249 (MQ=255) ctgctgTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACt < 1:839335/251‑1 (MQ=255) gCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAAc < 1:642562/144‑1 (MQ=255) gCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATa < 1:219080/223‑1 (MQ=255) gCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGAt > 1:163083/1‑251 (MQ=255) gCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGAt > 1:3608/1‑251 (MQ=255) ccTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGAtt > 1:834635/1‑251 (MQ=255) ttAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTAc < 1:136788/251‑1 (MQ=255) cAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGt < 1:801679/250‑1 (MQ=255) aaTCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCg > 1:610107/1‑250 (MQ=255) cggcggATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTcc < 1:509083/251‑1 (MQ=255) tCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAAt < 1:233404/251‑1 (MQ=255) aTTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGcc < 1:388884/251‑1 (MQ=255) cGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTAcc < 1:242475/222‑1 (MQ=255) tCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGc < 1:837483/251‑1 (MQ=255) aaTTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATg > 1:273561/1‑248 (MQ=255) ttCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGgcg < 1:656433/251‑1 (MQ=255) acgcgaacCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAGGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGac < 1:356420/251‑1 (MQ=255) acgcgaacCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGac < 1:421012/251‑1 (MQ=255) aaTATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAacac < 1:896595/166‑1 (MQ=255) aaTATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCAt < 1:462494/175‑1 (MQ=255) atatTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGcac < 1:676127/220‑1 (MQ=255) attatCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGac > 1:829956/1‑234 (MQ=255) ttatCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATa < 1:22893/158‑1 (MQ=255) atCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGACACCCGATTTTAGGCGATaaa > 1:473626/1‑251 (MQ=255) ggCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACg < 1:131640/204‑1 (MQ=255) gcgcTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGACACCCGATTTTAGGCGATAAATTc < 1:359937/249‑1 (MQ=255) cTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGACACCCGATTTTAGGCGATAAATTCTACGc < 1:586501/251‑1 (MQ=255) cTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGACACCCGATTTTAGGCGATAAATTCTACGc < 1:648074/251‑1 (MQ=255) ggTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTa < 1:662607/196‑1 (MQ=255) ggTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGACACCCGATTTTAGGc > 1:26561/1‑235 (MQ=255) ggTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGACACCCGATTTTAGGCGATAAATTCTACGcc > 1:331063/1‑250 (MQ=255) gTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGACACCCGATTTTAGGCGATAAATTCTACGccca > 1:246704/1‑251 (MQ=255) tttGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACAGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTc > 1:704693/1‑164 (MQ=255) cATTTGGAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGACACCCGATTTTAGGCGATAAATTCTACGCCCACCCACAAg > 1:822183/1‑250 (MQ=255) gAACAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGACACCCGATTTTAGGCGATAAATTCTACGCCCACCCACAAGCCAAAg > 1:56037/1‑250 (MQ=255) cAAGAGCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTa > 1:638890/1‑177 (MQ=255) gagCAAGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGACACCCGATTTTAGGCGATAAATTc < 1:522333/222‑1 (MQ=255) aaGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGACACCCGATTTTAGGCGATAAATTCTACGCCCACCCACAAGCCAAAGCCCTCTCGccc < 1:806827/251‑1 (MQ=255) aaGGTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGACACCCGATTTTAGGCGATAAATTCTACGCCCACCCACAAGCCAAAGCCCTCTCGccc < 1:6956/251‑1 (MQ=255) gTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGTGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACt < 1:374760/136‑1 (MQ=255) gTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGACACCCGAtt > 1:721855/1‑200 (MQ=255) gTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGACACCCGATTTTAGGCGATAAATTCTACGCCCACCCACAAGCCAAAGCCCTCTCGccc < 1:214873/248‑1 (MQ=255) gTATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGACACCCGATTTTAGGCGATAAATTCTACGCCCACCCACAAGCCAAAGCCCTCTCGCCCCg > 1:891506/1‑250 (MQ=255) tATGGTGGAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGACACCCGATTTTAGGCGATAAATTCTACGCCCACCCACAAGCCAAAGCCCTCTCGCCCCGCt < 1:223160/251‑1 (MQ=255) gtggAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGACACCCGATTTTAGGCGATAAATTCTACGCCCACCCACAAGCCAAAGCCCTCTCGCCCCGCTTATg > 1:6826/1‑251 (MQ=255) gAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGACACCCGATTTTAGGCGATAAATTCTACGCCCACCCACAAGCCAAAGCCCTCTCGCCCCGCTTATGcc < 1:784473/250‑1 (MQ=255) gAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGACACCCGATTTTAGGCGATAAATTCTACGCCCACCCACAAGCCAAAGCCCTCTCGCCCCGCTTATGcc < 1:576067/250‑1 (MQ=255) gAATTGCCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGACACCCGATTTTAGGCGATAAATTCTACGCCCACCCACAAGCCAAAGCCCTCTCGCCCCGCTTATGcc < 1:511421/250‑1 (MQ=255) | CTTTCGGTGCCGGGCAATCAGCCGCAATATTATGACAGCGCCATGTCGCGGGTGAAAGAAAAATACGGTTTTTGCGAACCGGCACACCGGCTGGACATGGCAACCAGTGGCATTCTGCTGTTTGCCTTAAGCAAATCGGCGGATCGCGAATTAAAACGTCAATTTCGCGAACGCGAACCGAAAAAATATTATCAGGCGCTGGTTTGGGGGCATTTGGAACAAGAGCAAGGTATGGTGGAATTACCGCTCATTTGCGATTGGGAAAACCGCCCACGCCAGAAAATTTGCTTCGAACGGGGAAAAAGAGCGGTCACTTTTTACGACGTTTTGCAGCGTTATCCAAATAACACCACCCGCATAAAACTCACGCCGATTACCGGTCGCTCCCATCAATTACGCCTGCACATGCTGGCGCTCGGACACCCGATTTTAGGCGATAAATTCTACGCCCACCCACAAGCCAAAGCCCTCTCGCCCCGCTTATGCC > 1/340727‑341213 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |