| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 334,477 | T→G | intergenic (‑67117/+10128) | unknown ← / ← unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 334,477 | 0 | T | G | 100.0% | 230.7 / NA | 83 | intergenic (‑67117/+10128) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (39/44); total (39/44) | |||||||||||
TATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAATTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTCTGCTGCCCCTGAGATAAAAATAGTTTTACGTTTTTGAGCTTGTTCTATTTCCATCAATAT > 1/334237‑334723 | tATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAg < 1:425568/251‑1 (MQ=255) tcATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAAGCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATc < 1:391999/251‑1 (MQ=255) aTCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTAttt > 1:524204/1‑251 (MQ=255) tCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAAt < 1:900992/235‑1 (MQ=255) ccAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTa > 1:546620/1‑251 (MQ=255) agTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAAt < 1:8405/250‑1 (MQ=255) gttTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGt > 1:341768/1‑251 (MQ=255) atatCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGAt < 1:298049/251‑1 (MQ=255) atCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGt > 1:345567/1‑251 (MQ=255) cagcaACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTAt > 1:804277/1‑247 (MQ=255) cagcaACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTg < 1:814346/249‑1 (MQ=255) gATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATaa > 1:850362/1‑251 (MQ=255) aTTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAAc < 1:561768/251‑1 (MQ=255) tttCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTAc > 1:815882/1‑250 (MQ=255) ttCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTcc < 1:702376/251‑1 (MQ=255) aaTATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAAc < 1:638018/251‑1 (MQ=255) tatCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAAc > 1:809881/1‑249 (MQ=255) aaTTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAAc < 1:47857/251‑1 (MQ=255) ttCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATc > 1:275272/1‑168 (MQ=255) ctcctGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATc < 1:473492/165‑1 (MQ=255) ctcctGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTcc < 1:621713/228‑1 (MQ=255) ctGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATa > 1:700107/1‑247 (MQ=255) ctGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGAt < 1:419327/251‑1 (MQ=255) ccATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAg > 1:816068/1‑251 (MQ=255) aTCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAAtct > 1:515464/1‑250 (MQ=255) tCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAAc > 1:318738/1‑223 (MQ=255) tttCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTcc < 1:324715/200‑1 (MQ=255) tttCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTgaga > 1:231319/1‑251 (MQ=255) cTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCt < 1:483408/193‑1 (MQ=255) cTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATAc > 1:832097/1‑220 (MQ=255) cTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTaaaa < 1:54332/233‑1 (MQ=255) gTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAAt > 1:669879/1‑232 (MQ=255) gTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAgaagaa > 1:881739/1‑251 (MQ=255) atttatttCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAAc > 1:350797/1‑205 (MQ=255) aaTAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAAc < 1:417604/251‑1 (MQ=255) tAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGAt < 1:739151/137‑1 (MQ=255) gAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAAt < 1:631790/99‑1 (MQ=255) gAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAAt < 1:310542/99‑1 (MQ=255) gAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTaa < 1:473381/132‑1 (MQ=255) gAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTcc < 1:739553/172‑1 (MQ=255) gAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTcc > 1:565997/1‑172 (MQ=255) gAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAActt > 1:43472/1‑249 (MQ=255) gAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAActt > 1:319577/1‑249 (MQ=255) atatAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAAc > 1:721998/1‑187 (MQ=255) tataGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAAtc < 1:744840/96‑2 (MQ=255) gagaTACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAAATCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTaaaa < 1:483504/205‑1 (MQ=255) gaTACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAg > 1:245853/1‑91 (MQ=255) aTACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAAt < 1:130369/250‑1 (MQ=255) ccAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAgg > 1:3395/1‑251 (MQ=255) ccAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAgg < 1:647383/251‑1 (MQ=255) cATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAAt > 1:677143/1‑81 (MQ=255) gAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTaaaa > 1:585769/1‑190 (MQ=255) gAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGaataat < 1:92141/250‑1 (MQ=255) aaaTCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTg < 1:852576/120‑1 (MQ=255) aaaTCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAAtt < 1:379035/250‑1 (MQ=255) aaTCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTaaaa > 1:785115/1‑188 (MQ=255) cATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAAtttt > 1:272016/1‑248 (MQ=255) atatCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTctgc < 1:865592/251‑1 (MQ=255) atatCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTctgc < 1:306384/251‑1 (MQ=255) tCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTAcc < 1:356694/134‑1 (MQ=255) cTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTCtgctgc > 1:819354/1‑250 (MQ=255) cACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTCTGCTGCCCCt < 1:769846/251‑1 (MQ=255) aCGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTTAGGGAATGGGCGAAGTATCAAATAGTCCTc < 1:884370/69‑1 (MQ=255) aCGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTCTGCTGccc > 1:425316/1‑248 (MQ=255) gCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTCTGCTGCCCCTGAGATaaa > 1:468832/1‑251 (MQ=255) gACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTCTGCTGCCCCTGAGATAAAAAt > 1:393426/1‑251 (MQ=255) aCCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTCTGCTGCCCCTGAGATAAAAAt < 1:454707/250‑1 (MQ=255) aCCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTCTGCTGCCCCTGAGATAAAAAt < 1:383070/250‑1 (MQ=255) ccACAATTCTTTCCCTTCTTTATTCTGAGGGAAGGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCt < 1:770175/118‑1 (MQ=255) cccTTCTTTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTCTGCTGCCCCTGAGATAAAAATAGTTTTACGttttt > 1:247802/1‑251 (MQ=255) cttcttTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGaataa > 1:278073/1‑209 (MQ=255) tcttTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAAc > 1:256528/1‑182 (MQ=255) tcttTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTCTGCTGCCCCTGAGAt > 1:824980/1‑227 (MQ=255) tcttTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTCTGCTGCCCCTGAGATAAAAAt < 1:514362/233‑1 (MQ=255) tcttTATTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTCTGCTGCCCCTGAGATAAAAATAGTTTTACGTTTTTGAg > 1:5740/1‑250 (MQ=255) aTTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTCTGCTGCCCCTGAGATAAAAATAGTTTTACGTTTTTGAGCTTGtt > 1:483023/1‑251 (MQ=255) aTTCTGAGGGAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTCTGCTGCCCCTGAGATAAAAATAGTTTTACGTTTTTGAGCTTGtt > 1:663046/1‑251 (MQ=255) ggAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTCTGCTGCCCCTGAGATAAAAATAGTTTTACGTTTTTGAGCTTGTTCTAttt < 1:660429/249‑1 (MQ=255) ggAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTCTGCTGCCCCTGAGATAAAAATAGTTTTACGTTTTTGAGCTTGTTCTAttt < 1:172045/249‑1 (MQ=255) ggAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTCTGCTGCCCCTGAGATAAAAATAGTTTTACGTTTTTGAGCTTGTTCTAttt < 1:122472/249‑1 (MQ=255) ggAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTCTGCTGCCCCTGAGATAAAAATAGTTTTACGTTTTTGAGCTTGTTCTATTTc < 1:82320/250‑1 (MQ=255) ggAATGGGCGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTCTGCTGCCCCTGAGATAAAAATAGTTTTACGTTTTTGAGCTTGTTCTATTTc < 1:172985/250‑1 (MQ=255) cGAAGTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTCTGCTGCCCCTGAGATAAAAATAGTTTTACGTTTTTGAGCTTGTTCTATTTCCATCAatat < 1:533447/251‑1 (MQ=255) | TATTCATCTCATTATCCCAGAGTTGTTTTGCCATATATCCAGTAGCAGCAACAGGGATTAAAACATTTCCATTCCTTTTGGAAATATCAAATTCCTCCTGCATACCATTTGATAAAATCAAATTTCCATTCTGTAATTTATTTCCGAATAGAAATATAGAGATACCAGCATAAGAAATCATATCTTCACGCCAAGCAGACCACAATTCTTTCCCTTCTTTATTCTGAGGGAATGGGCGAATTATCAAATAGTCCTCATCTATTTTTAAATTTTGTTCCGTAAGATGTTTTATTGCGCCTGAAATAACTGAGCTACCTATTCCTAATCCAAAACCTGTAACAATACGATACCCTAGTTTTAAAATCTCTTGAGAAAGAGAAGAAACAAATTGTTCAACTTCTTGCTGAGAATAAGGAGAATAATTTTCTGCTGCCCCTGAGATAAAAATAGTTTTACGTTTTTGAGCTTGTTCTATTTCCATCAATAT > 1/334237‑334723 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |