| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,534,414 | T→C | intergenic (‑89786/‑107350) | unknown ← / → unknown | tRNA‑Met‑CAT/tRNA‑Gly‑GCC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,534,414 | 0 | T | C | 100.0% | 189.3 / NA | 67 | intergenic (‑89786/‑107350) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Gly‑GCC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (34/33); total (34/33) | |||||||||||
AATTTTATCGCGCAACTGCGCAATATCACCGCGTAACAACAGCAGACTTT‑CATCGCCCGCCCGAGTTGTTGCGCCGGCATTCGCCGTAATTCTGTCCGCCACGACCGTCGCCCGATGCCCTTCCTCACCTTCCACCACCACTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCTACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCGGTCAAAAAATACGGCGTTTTTTTCATTGCGCCCTACTCCGCCTCAAAGGTCAGCATATATTCCACCGAACGGCGATCGTAATCGGGGTTGCCTTTCACGTTTTCCGAAAATT > 1/1534168‑1534658 | atttttATCGCGCACCGGCGAAATACCCCCGCGAAACAACAGAAG‑CTTTCCACCCCCCCCCGGAGTTGTGGCGCGGGCTTCCCCCGTATTTCTGCCCGCCACGCCCGTCCCCCGATGCCCTTCCTCCCCTCCCCCCACCCCTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTAAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACAt < 1:891100/249‑1 (MQ=255)aaTTTTACCGCGCACCTGCGCAATCCCCCCGCGTAACAACAGCAGCTTTT‑CACCCCCCCCCCGTTTTGTTGCGCCGGCTTTCGCCTTATTTCTGCCCGCCACGACCGTCGCCCGATGCCTTTCCTCCCCTTCCCCCCCCACTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACAt < 1:89965/251‑1 (MQ=255) tttaccgcccaccTGCGAAATATCCCCGCGAAACACCGCCAGCCTTT‑CACCCCCCCCCCGGTTTGTTCCGCCGCCATCCCCCGTATTTCTGCCCGCCCCGACCGTCCCCCGATGCCCTTCCTCCCCTCCCCCCCCCACTTACAACGCCATATTCGGACCCGCTTTTAACGGCAGGTAAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAgg < 1:609862/239‑1 (MQ=255) tttaccgcaaactggccaaaTATCGCCGCGAAAAAACAGCAAACTGC‑CACCCCCCGCCGGTGTTGTGGCGCCGGCTTGCGCCGAATTTCGCCCCGCCCCGACCGTCGCCCGAGGCCTTTCCCCACCTTCCACCCCCCCTTACACCGCCATATTCGGATCCGTTTTGACCGGCAGGTAAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAgg < 1:234407/233‑1 (MQ=255) ccaacctacacattacccccgctaaacaccAGCAGTCTTT‑CACCGCCCGCCGGTTTTTTTGCGCCGACTTCCGCCGTAATTCTGCCCCCCCCGCCCGCCCCCCGATCCCCTTCCTCCCCTCCCCCCACCTCTTTAAACGCCATATTCGGACCCGTTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGAc < 1:194006/227‑1 (MQ=255) caatacccccGCGAAACAACAGCAGCCTTC‑CACCCCCCGCCGGGGTTGTGGCGCCGGCATTCGCCGTAATTCTGCCCCCCACGACCGCCGCCCGATGCCCTTCCTCCCCTCCCCCCCCCCCTTTCAACGCCATATTCGGACCCGCTTTTAACGGCAGGTAAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGt < 1:48171/242‑1 (MQ=255) cAATATCACCGCGTAACAACAGCAGACTTT‑CATCGCCCGCCCGAGTTGTTGCGCCGGCATTCGCCGTAATTCTGTCCGCCACGACCGTCGCCCGATGCCCTTCCTCACCTTCCACCACCACTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCCTTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATa > 1:74820/1‑232 (MQ=255) cAATATCACCGCGTAACAACAGCAGACTTT‑CATCGCCCGCCCGAGTTGTTGCGCCGGCATTCGCCGTAATTCTGTCCGCCACGACCGTCGCCCGATGCCCTTCCTCACCTTCCACCACCACTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGCTTTTCCCCTTGGCGTAACACCCCCCCATAGGTTTCGACGGCGGGGGt > 1:794880/1‑250 (MQ=255) cAATATCACCGCGTAACAACAGCAGACTTT‑CATCGCCCGCCCGAGTTGTTGCGCCGGCATTCGCCGTAATTCTGTCCGCCACGACCGTCGCCCGATGCCCTTCCTCACCTTCCACCACCACTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCCCATAGGTTTCGACGGCGGGGGt > 1:483383/1‑250 (MQ=255) cAATATCACCGCGTAACAACAGCAGACTTT‑CATCGCCCGCCCGAGTTGTTGCGCCGGCATTCGCCGTAATTCTGTCCGCCACGACCGTCGCCCGATGCCCTTCCTCACCTTCCACCACCACTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCgggggg > 1:152639/1‑249 (MQ=255) cAATATCACCGCGTAACAACAGCAGACTTT‑CATCGCCCGCCCGAGTTGTTGCGCCGGCATTCGCCGTAATTCTGTCCGCCACGACCGTCGCCCGATGCCCTTCCTCACCTTCCACCACCACTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGt > 1:298971/1‑250 (MQ=255) acaacaGCAGACTTT‑CACCCCCCCCCCGATTTGTGGCGCCGGCATTCGCCGTAATTCTGTCCGCCACGCCCGTCGCCCGATGCCCTTCCTCCCCTCCCCCCCCCACTTTCAACGCCATATTCGGATCCGCTTTTAACGGCGGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAg < 1:155811/251‑1 (MQ=255) cgcccgccCGATTTTTTGCGCCGCCTTCCCCCTTATTTCTGCCCGCCACGCCCGTCGCCCGATGCCCTTCCTCCCCTCCCCCCACCACTTTCACCGCCATATTCGGATCCGTTTTTAACGGCGGGTAAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGtt < 1:156324/251‑1 (MQ=255) cgcccgAGTTGTTGCGCCGGCATTCGCCGTAATTCTGTCCGCCACGACCGTCGCCCGATGCCCTTCCTCACCTTCCACCACCACTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGGATAATAGGATTTTCCCG‑TCACGGTTTGc > 1:664334/1‑250 (MQ=255) cccgAGTTGTTGCGCCGGCATTCGCCGTAATTCTGTCCGCCACGACCGTCGCCCGATGCCCTTCCTCACCTTCCACCACCACTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGAc > 1:559770/1‑202 (MQ=255) gAGTTGTTGCGCCGGCATTCGCCGTAATTCTGTCCGCCACGACCGTCGCCCGATGCCCTTCCTCACCTTCCACCACCACTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATTTCGGAATAATAGGATTTTCCCG‑TCACGGGTTGCCCGTCa > 1:60277/1‑251 (MQ=255) ttgtggCGCCGGCTTTCCCCTTATTTCTGCCCCCCCCGACCGTCGCCCGATCCCCTTCCTCCCCTCCCCCCCCCTCTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATAc < 1:703467/251‑1 (MQ=255) ccGTAATTCTGTCCGCCACGACCGTCGCCCGATGCCCTTCCTCACCTTCCACCACCACTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTGGGTTTTGGCCGTCAGTAAACGCTGATTTTCCCCTTGGCGTAACACCCCCACATAGGTTTTGGCGGCGGGGGGCAATTTGGAAAAATAGGGTTTTCTCGTTCCCGCTTTTCCCG‑CATATTTGGCAAAT‑‑ACTTAAAgg > 1:554438/1‑251 (MQ=255) cttatttctgccccccccgcccGTCCCCCGTTGCCTTTCCTCCCCTTCCCCCCCCACTTTCAACGCCATTTTCGGATCCGTTTTTAACGGCGGGTAAAATTACCCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAggg < 1:288463/231‑1 (MQ=255) cttatttCTGCCCGCCACGACCGTCGCCCGATGCCCTTCCTCACCTTCCCCCCCCACTTTCACCGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAggg < 1:477848/246‑1 (MQ=255) cGTATTTCTGCCCCCCCCGACCGTCGCCCGATGCCCTTCCTCCCCTCCCCCCCCCACTTTCAACGCCATATTCGGATCCGTTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAggg < 1:561334/251‑1 (MQ=255) ttatttctgccccccccgcccGTCGCCCGATCCCCTTCCCCCCCTCCCCCCCCCCCTTTCACCGCCATATTCGGATCCGTTTTTAGCGGCAGGTAAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGgc < 1:301318/232‑1 (MQ=255) gTAATTCGGCCCGCCCCGACCGCCCCCCGATCCCCTTCCCCCCCTCCCCCCCCCCCTTCCAACGCCATATTCGGACCCGTTTTTAACGGCAGGTAAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAggg < 1:237758/250‑1 (MQ=255) tgttaataagagacagATGCCTTCCCTCGCCTTCCCCCCCCACTTCCACCGCCATATTCGAATCCGTTTTTAACGACAGGTGAAATTAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCg < 1:842345/236‑1 (MQ=255) ccACGCCCGTCGCCCGATGCCCTTCCTCACCTCCCCCCCCCCCTTTCACCGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCg < 1:733651/251‑1 (MQ=255) cGCCCGATCCCCTTCCTCCCCTCCCCCCCCCACTTTCACCGCCATATTCGGATCCGTTTTTAACGGCAGGTAAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTc < 1:618418/163‑1 (MQ=255) cccGATGCCCTTCCTCACCTTCCACCACCACTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTTCCCGTCCGCAACCGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGGCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAggctggcc > 1:788095/1‑244 (MQ=255) aTGCCCTTCCTCACCTTCCACCACCACTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGTCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCCTGTCGGGATAATAGGATTTTTCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAAGGCGTGCGGCCAAGCGTGAGGTGCAACACATa > 1:692615/1‑251 (MQ=255) cTTCCTCCCCTTCCCCCACCACTTTCAACGCCATATTCGGATCCGTTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGtt < 1:122845/137‑1 (MQ=255) cTTCCTCACCTTCCACCACCACTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGGCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATAc > 1:633974/1‑197 (MQ=255) tCCTCACCTTCCACCACCACTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGA‑TTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑GCACGGTTTGCCCGTCATACTGGGCAAAA‑‑ACATAAAGGGCGGGCGGCCCAGCGCGAGGGGCCAAACACAAGCCCaaa > 1:322008/1‑251 (MQ=255) ccTTCCACCACCACTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGaat > 1:439548/1‑154 (MQ=255) ccTTCCACCACCACTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGGCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAggg > 1:721445/1‑208 (MQ=255) ttCCACCACCACTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGAc > 1:746897/1‑132 (MQ=255) tCCACCACCACTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGGATAATAGGATTTTCCCG‑TCACGGGTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAAGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCggg > 1:365493/1‑250 (MQ=255) caccaccacTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGGGCGGTCa > 1:58587/1‑251 (MQ=255) ccaccacTTTCAACGCCTTATTCGGACCCGTTTTTAACGGCAGGTAAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATAc < 1:698087/182‑1 (MQ=255) cctttccaccGCCATATCGGGGTCCGTTTTTACCGGCAGTGGAAAAAAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCGGTCAAAAAAt < 1:420183/242‑1 (MQ=255) cTTTCACCGCCATATTCGGATCCGTTTTTAACGGAAGGTGAAAAAAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCGGTCAAAAAATAc < 1:40495/251‑1 (MQ=255) cTTTCAACCCCATATTCGGATCCGCTTTTAACGGCGGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCGGTCAAAAAATAc < 1:4054/251‑1 (MQ=255) tttCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAAAAACCCCCCTTGTCGGTTTTGCCCGTCAGCAACGGCTGGTTTTCCCCTTGGCGGAACACCTCCACATAGGGTTCGACGGCGGGGGGCCTGTCGGAATAATAGGAATTTTTCG‑TCACGGGTTGCCCGGCTAACTGGGCAAAA‑‑ACATAAAGGGCGTGCGGCCCAGCg > 1:20878/1‑208 (MQ=255) gCCATATTCGGATCCGCTTTTAACGGCAGGTAAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGaat < 1:185048/133‑1 (MQ=255) atatTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGGTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGGGCGGTCAAAAAATACGGCGgtttttt > 1:551232/1‑251 (MQ=255) attgggttCCGCTTTAAACGGCAGGTAAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCGGTCAAAAAATACGGCGtttttt < 1:503918/241‑1 (MQ=255) atTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGGTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGGCCAAGCg > 1:584592/1‑196 (MQ=255) gCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAg > 1:96450/1‑170 (MQ=255) tttagcggaggtagAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCGGTCAAAAAATACGGCGTTTTTTTCATTGCGCCCTACTc < 1:200084/238‑1 (MQ=255) ggTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGccc > 1:405140/1‑133 (MQ=255) tGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCGGTCAAAAAATACGGCGTTTTTTTCATTGCGCCCTACTCCGCCTCAAAgg < 1:719168/250‑1 (MQ=255) gAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGc > 1:382294/1‑142 (MQ=255) gAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAacac < 1:521166/183‑1 (MQ=255) tAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAATACACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCGGTCAAAAAATACGGCGTTTTTTTCATTGCGCCCTACTCCGCCTCAAAGGTCAg > 1:768259/1‑250 (MQ=255) ccATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGt < 1:184164/80‑1 (MQ=255) ccATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCGGTCAAAAAATACGGCGTTTTTTTCATTGCGCCCTACTCCGCCTCAAAGGTCAGCATATAtt < 1:538386/250‑1 (MQ=255) ccATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCGGTCAAAAAATACGGCGTTTTTTTCATTGCGCCCTACTCCGCCTCAAAGGTCAGCATATATTc < 1:611408/251‑1 (MQ=255) aTTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCGGTCAAAAAATACGGCGTTTTTTTCATTGCGCCCTACTCCGCCTCAAAGGTCAGCATATATTCCa > 1:406149/1‑251 (MQ=255) aTTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCGGTCAAAAAATACGGCGTTTTTTTCATTGCGCCCTACTCCGCCTCAAAGGACAGCATATATTCCa > 1:191185/1‑251 (MQ=255) gTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCGGTCAAAAAATACGGCGTTTTTTTCATTGCGCCCTACTCCGCCTCAAAGGTCAGCATATATTCCACCGAACg > 1:45630/1‑251 (MQ=255) gATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCGGTCAAAAAATACGGCGTTTTTTTCATTGCGCCCTACTCCGCCTCAAAGGTCAGCATATATTCCACCGAACGGCGATCg < 1:644993/236‑1 (MQ=255) gATTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCGGTCAAAAAATACGGCGTTTTTTTCATTGCGCCCTACTCCGCCTCAAAGGTCAGCATATATTCCACCGAACGGCGATCGTAATCGGGGTTGc > 1:800893/1‑249 (MQ=255) aTTTTCCCCTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGa > 1:833898/1‑66 (MQ=255) ccccTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCGGTCAAAAAATACGGCGTTTTTTTCATTGCGCCCTACTCCGCCTCAAAGGTCAGCATATATTCCACCGAACGGCGATCGTAATCGGGGTTGCCTTTCACg < 1:771005/251‑1 (MQ=255) ccccTTGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCGGTCAAAAAATACGGCGTTTTTTTCATTGCGCCCTACTCCGCCTCAAAGGTCAGCATATATTCCACCGAACGGCGATCGTAATCGGGGTTGCCTTTCACg < 1:131998/251‑1 (MQ=255) tGGCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCGGTCAAAAAATACGGCGTTTTTTTCATTGCGCCCTACTCCGCCTCAAAGGTCAGCatatat > 1:94788/1‑207 (MQ=255) ggCGTAACACCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCGGTCAAAAAATACGGCGTTTTTTTCATTGCGCCCTACTCCGCCTCAAAGGTCAGCATATATTCCACCGAACGGCGATCGTAATCGGGGTTGCCTTTCACGTTTTc > 1:795777/1‑250 (MQ=255) cacCTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCGGTCAAAAAATACGGCGTTTTTTTCATTGCGCCCTACTCCGCCTCAAAGGTCAGCATATATTCCACCGAACGGCGATCGTAATCGGGGTTGCCTTTCACGTTTTCCGAAAAtt > 1:363816/1‑251 (MQ=255) ccTCCACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCGGTCAAAAAATACGGCGTTTTTTTCATTGCGCCCTACTCCGCCTCAAAGGTCAGCATATATTCCACCGAACGGCGATCGTAATCGGGGTTGCCTTTCACGTTTTCCGAAAAtt > 1:226215/1‑249 (MQ=255) | AATTTTATCGCGCAACTGCGCAATATCACCGCGTAACAACAGCAGACTTT‑CATCGCCCGCCCGAGTTGTTGCGCCGGCATTCGCCGTAATTCTGTCCGCCACGACCGTCGCCCGATGCCCTTCCTCACCTTCCACCACCACTTTCAACGCCATATTCGGATCCGCTTTTAACGGCAGGTGAAAATAACCGCCATTGTCGGTTTTGCCCGTCAGCAACGGCTGATTTTCCCCTTGGCGTAACACCTCTACATAGGTTTCGACGGCGGGGGTCATGTCGGAATAATAGGATTTTCCCG‑TCACGGTTTGCCCGTCATACTGGGCAAAT‑‑ACATAAAGGGCGTGCGTCCAAGCGTGAGGTGCAACACATAAGCCCAAAAGTGCGGTCAAAAAATACGGCGTTTTTTTCATTGCGCCCTACTCCGCCTCAAAGGTCAGCATATATTCCACCGAACGGCGATCGTAATCGGGGTTGCCTTTCACGTTTTCCGAAAATT > 1/1534168‑1534658 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |