Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,528,750 G→A intergenic (‑84122/‑113014) unknown ← / → unknown tRNA‑Met‑CAT/tRNA‑Gly‑GCC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,528,7500GA100.0% 213.2 / NA 79intergenic (‑84122/‑113014)unknown/unknowntRNA‑Met‑CAT/tRNA‑Gly‑GCC
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (51/28);  total (51/28)

TTAAAAACATGCTCTCTCCCGATCTCCCAATAATAGGGCTGCCCTTTAACGGCAACATAAGGCTCGGGTAAGGGCTCGCGCGGGGTGGCGCAGGCGGTGACTAGGATACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGACTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAGGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGAAATGGCGAGTTCGAAAATTTTCGTTAAGAAAATTGCAAGTGAGCG  >  1/1528511‑1528994
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                    
ttAAAAACATGCTCTCTCCCGATCTCCCAATAATAGGGCTGCCCTTTAACGGCAACATAAGGCTCGGGTAAGGGCTCGCGCGGGGTGGCGCAGGCGGTGACTAGGATACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCa                                                                                                                                                                                                                                             <  1:158945/249‑1 (MQ=255)
    aaaCATGCTCTCTCCCGATCTCCCAATAATAGGGCTGCCCTTTAACGGCAACATAAGGCTCGGGTAAGGGCTCGCGCGGGGTGGCGCAGGCGGTGACTAGGATACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTcccc                                                                                                                                                                                                                                       <  1:815007/251‑1 (MQ=255)
           ctctctCCCGATCTCCCAATAATAGGGCTGCCCTTTAACGGCAACATAAGGCTCGGGTAAGGGCTCGCGCGGGGTGGCGCAGGCGGTGACTAGGATACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTgggg                                                                                                                                                                                                                                <  1:73805/251‑1 (MQ=255)
           ctctctCCCGATCTCCCAATAATAGGGCTGCCCTTTAACGGCAACATAAGGCTCGGGTAAGGGCTCGCGCGGGGTGGCGCAGGCGGTGACTAGGATACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTgggg                                                                                                                                                                                                                                <  1:486185/251‑1 (MQ=255)
                     aTCTCCCAATAATAGGGCTGCCCTTTAACGGCAACATAAGGCTCGGGTAAGGGCTCGCGCGGGGAGGCGCAGGCGGTGACTAGGATACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGa                                                                                                                                                                                                                      >  1:222938/1‑251 (MQ=255)
                         cccAATAATAGGGCTGCCCTTTAACGGCAACATAAGGCTCGGGTAAGGGCTCGCGCGGGGTGGCGCAGGCGGTGACTAGGATACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTgggg                                                                                                                                                                                                                                >  1:645570/1‑237 (MQ=255)
                         cccAATAATAGGGCTGCCCTTTAACGGCAACATAAGGCTCGGGTAAGGGCTCGCGCGGGGTGGCGCAGGCGGTGACTAGGATACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAg                                                                                                                                                                                                                  >  1:595799/1‑251 (MQ=255)
                              taataGGGCTGCCCTTTAACGGCAACATAAGGCTCGGGTAAGGGCTCGCGCGGGGTGGCGCAGGCGGTGACTAGGATACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTg                                                                                                                                                                                                             >  1:283483/1‑251 (MQ=255)
                                           cTTTAACGGCAACATAAGGCTCGGGTAAGGGCTCGCGCGGGGTGGCGCAGGCGGTGACTAGGATACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAg                                                                                                                                                                                                                  <  1:768727/233‑1 (MQ=255)
                                            tttAACGGCAACATAAGGCTCGGGTAAGGGCTCGCGCGGGGTGGCGCAGGCGGTGACTAGGATACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAAc                                                                                                                                                                                               <  1:363094/251‑1 (MQ=255)
                                                      aCATAAGGCTCGGGTAAGGGCTCGCGCGGGGTGGCGCAGGCGGTGACTAGGATACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTa                                                                                                                                                                                     <  1:714829/251‑1 (MQ=255)
                                                          aaGGCTCGGGTAAGGGCTCGCGCGGGGTGGCGCAGGCGGTGACTAGGATACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCg                                                                                                                                                                                 <  1:606192/251‑1 (MQ=255)
                                                          aaGGCTCGGGTAAGGGCTCGCGCGGGGTGGCGCAGGCGGTGACTAGGATACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCg                                                                                                                                                                                 <  1:840011/251‑1 (MQ=255)
                                                                       gggCTCGCGCGGGGTGGCGCAGGCGGTGACTAGGATACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCg                                                                                                                                                                                 <  1:608971/238‑1 (MQ=255)
                                                                                  gggTGGCGCAGGCGGTGACTAGGATACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGAttt                                                                                                                                                          >  1:608764/1‑250 (MQ=255)
                                                                                  gggTGGCGCAGGCGGTGACTAGGATACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGAttt                                                                                                                                                          >  1:727356/1‑250 (MQ=255)
                                                                                  gggTGGCGCAGGCGGTGACTAGGATACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGAttt                                                                                                                                                          >  1:130898/1‑250 (MQ=255)
                                                                                            ggCGGTGACTAGGATACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTAc                                                                                                                                                >  1:154175/1‑250 (MQ=255)
                                                                                                  gACTAGGATACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACtt                                                                                                                                         >  1:840142/1‑251 (MQ=255)
                                                                                                       ggATACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCa                                                                                                                                                                           <  1:702686/212‑1 (MQ=255)
                                                                                                         aTACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAg                                                                                                                                                                                                          >  1:265619/1‑179 (MQ=255)
                                                                                                                         ccATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGCTAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAgg                                                                                                                  >  1:790681/1‑251 (MQ=255)
                                                                                                                         ccATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAgg                                                                                                                  >  1:886493/1‑251 (MQ=255)
                                                                                                                            tcatAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCa                                                                                                                                                                                                                                             <  1:316176/125‑1 (MQ=255)
                                                                                                                            tcatAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGAt                                                                                                                                                            <  1:377211/206‑1 (MQ=255)
                                                                                                                            tcatAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAggggg                                                                                                               >  1:837287/1‑251 (MQ=255)
                                                                                                                                    cGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCAt                                                                                                        >  1:361436/1‑250 (MQ=255)
                                                                                                                                      cccTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTTCCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGc                                                                                                                                <  1:520790/224‑1 (MQ=255)
                                                                                                                                        cTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTcccc                                                                                                                                                                                                                                       <  1:127820/119‑1 (MQ=255)
                                                                                                                                         tttCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAgc                                                                                                  <  1:386753/251‑1 (MQ=255)
                                                                                                                                                    cTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTgggg                                                                                                                                                                                                                                <  1:144874/114‑1 (MQ=255)
                                                                                                                                                       gAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTAtttt                                                                                                                                                                                       >  1:833830/1‑152 (MQ=255)
                                                                                                                                                       gAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGAttt                                                                                    >  1:785989/1‑251 (MQ=255)
                                                                                                                                                            atatGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTcccc                                                                                                                                                                                                                                       <  1:738241/99‑1 (MQ=255)
                                                                                                                                                                 gTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAggg                                                                                                                                                                                                                       >  1:683225/1‑110 (MQ=255)
                                                                                                                                                                 gTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTa                                                                          >  1:87796/1‑251 (MQ=255)
                                                                                                                                                                 gTTCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTa                                                                          >  1:250415/1‑251 (MQ=255)
                                                                                                                                                                   tCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAg                                                                                                                                                                                                               >  1:647859/1‑116 (MQ=255)
                                                                                                                                                                   tCACTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAgg                                                                        >  1:297824/1‑251 (MQ=255)
                                                                                                                                                                      cTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGt                                                                                                                                                  <  1:790133/174‑1 (MQ=255)
                                                                                                                                                                      cTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATg                                                                                                                                 >  1:309229/1‑191 (MQ=255)
                                                                                                                                                                      cTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTg                                                                                                     >  1:718848/1‑219 (MQ=255)
                                                                                                                                                                      cTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGaaa                                                                     >  1:605163/1‑251 (MQ=255)
                                                                                                                                                                      cTATAGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGaaa                                                                     >  1:690921/1‑251 (MQ=255)
                                                                                                                                                                          aGTCATTTGTTATTATCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAAtttt                                                                 >  1:198901/1‑251 (MQ=255)
                                                                                                                                                                                        atCTCCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGc                                                    >  1:471371/1‑250 (MQ=255)
                                                                                                                                                                                          ctcCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATaaaa                                                                                                                                                                                                  >  1:278093/1‑106 (MQ=255)
                                                                                                                                                                                          ctcCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCAt                                                 >  1:790834/1‑251 (MQ=255)
                                                                                                                                                                                          ctcCTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCAt                                                 >  1:104004/1‑251 (MQ=255)
                                                                                                                                                                                            ccTAGATAGCCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGa                                               >  1:282550/1‑251 (MQ=255)
                                                                                                                                                                                               agatagcCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATc                                                                                                       <  1:622593/192‑1 (MQ=255)
                                                                                                                                                                                               agatagcCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGAAAt                                            >  1:870610/1‑251 (MQ=255)
                                                                                                                                                                                                 atagcCTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGAAATgg                                          <  1:151525/251‑1 (MQ=255)
                                                                                                                                                                                                    gccTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCg                                                                                                                                                                                 >  1:91240/3‑113 (MQ=255)
                                                                                                                                                                                                     ccTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGAAATGGCg                                        <  1:500214/248‑1 (MQ=255)
                                                                                                                                                                                                     ccTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGAAATGGCg                                        <  1:125638/248‑1 (MQ=255)
                                                                                                                                                                                                     ccTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGAAATGGCGAg                                      >  1:121519/2‑251 (MQ=255)
                                                                                                                                                                                                           tgtTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGAAATGGCGAGTTCGaa                                >  1:794725/1‑251 (MQ=255)
                                                                                                                                                                                                            gtTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGa                                                                                                                                   >  1:171264/1‑151 (MQ=255)
                                                                                                                                                                                                              tttttGCCTAGGGTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAgc                                                                                                  <  1:198900/182‑1 (MQ=255)
                                                                                                                                                                                                                        gggTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGAAATGGCGAGTTCGAAAATTTTCGTTAAg                   >  1:58319/1‑251 (MQ=255)
                                                                                                                                                                                                                        gggTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGAAATGGCGAGTTCGAAAATTTTCGTTAAg                   >  1:89396/1‑251 (MQ=255)
                                                                                                                                                                                                                         ggTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGAAATGGCGAGTTCGAAAATTTTCGTTAAGa                  >  1:384254/1‑251 (MQ=255)
                                                                                                                                                                                                                         ggTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGAAATGGCGAGTTCGAAAATTTTCGTTAAGa                  >  1:494152/1‑251 (MQ=255)
                                                                                                                                                                                                                         ggTAACAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGAAATGGCGAGTTCGAAAATTTTCGTTAAGa                  >  1:332262/1‑251 (MQ=255)
                                                                                                                                                                                                                              cAAGTTACCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGAAATGGCGAGTTCGAAAATTTTCGTTAAGAAAAtt             >  1:441484/1‑251 (MQ=255)
                                                                                                                                                                                                                                    aCCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCGCTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGaaa                                             <  1:278066/213‑1 (MQ=255)
                                                                                                                                                                                                                                    aCCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAAc                                                                                                                     <  1:719068/141‑1 (MQ=255)
                                                                                                                                                                                                                                    aCCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGa                                                                                                    <  1:175488/158‑1 (MQ=255)
                                                                                                                                                                                                                                    aCCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGaaa                                             >  1:383542/1‑213 (MQ=255)
                                                                                                                                                                                                                                    aCCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGAAATGGCGAGTTCGAAAATTTTCGTTAAGAAAATTGCAAGt       >  1:280879/1‑251 (MQ=255)
                                                                                                                                                                                                                                    aCCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGAAATGGCGAGTTCGAAAATTTTCGTTAAGAAAATTGCAAGt       >  1:322687/1‑251 (MQ=255)
                                                                                                                                                                                                                                    aCCCTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGAAATGGCGAGTTCGAAAATTTTCGTTAAGAAAATTGCAAGt       >  1:862524/1‑251 (MQ=255)
                                                                                                                                                                                                                                     cccTAGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATc                                                                                                       >  1:890700/1‑154 (MQ=255)
                                                                                                                                                                                                                                         aGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATc                                                                                                       <  1:35436/150‑1 (MQ=255)
                                                                                                                                                                                                                                         aGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGAAATGGCGAGTTCGAAAATTTTCGTTAAGAAAATTGCAAGTGAGCg  >  1:75731/1‑251 (MQ=255)
                                                                                                                                                                                                                                         aGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGAAATGGCGAGTTCGAAAATTTTCGTTAAGAAAATTGCAAGTGAGCg  >  1:736000/1‑251 (MQ=255)
                                                                                                                                                                                                                                         aGATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGAAATGGCGAGTTCGAAAATTTTCGTTAAGAAAATTGCAAGTGAGCg  >  1:900464/1‑251 (MQ=255)
                                                                                                                                                                                                                                          gATTAAGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGAAATGGCGAGTTCGaaaa                              >  1:391970/1‑222 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                    
TTAAAAACATGCTCTCTCCCGATCTCCCAATAATAGGGCTGCCCTTTAACGGCAACATAAGGCTCGGGTAAGGGCTCGCGCGGGGTGGCGCAGGCGGTGACTAGGATACAGCAAAGACTCACCATCATAAAACGCCCTTTCCCGATCACTTGAATAATATGGTTCACTATAGTCATTTGTTATTATCTCCTAGATAGACTTGGTGTTTTTTGCCTAGGGTAACAAGTTACCCTAGATTAGGCATAGTCATTCCCCTTTGGGGAATTTAGGGAACAGAAGTGCAGTCATAAAAAACAGTATTTTTAAGCGTTTTCAACGATAGAAAACGATTTCAAAATGTACCGCACTTTTTTGATGCTCCGACAAAACAGGGGGCCCCCATCTGAGCCGCCTGAGCGATTTGCAATTTTTAGGAAATTTTCGCCTGTTTGAGCCATGAAATGGCGAGTTCGAAAATTTTCGTTAAGAAAATTGCAAGTGAGCG  >  1/1528511‑1528994

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑