Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,524,979 A→G intergenic (‑80351/‑116785) unknown ← / → unknown tRNA‑Met‑CAT/tRNA‑Gly‑GCC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,524,9790AG100.0% 198.3 / NA 69intergenic (‑80351/‑116785)unknown/unknowntRNA‑Met‑CAT/tRNA‑Gly‑GCC
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (33/36);  total (33/36)

TGTGGCGTCGTTACGACCAACTTCTTTATCTATTTCCGGTTTATCCAATTACATTACTTTCTTAAGGGAGACGGGACAGGATTCCAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATATGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACATCGCGGGCTTTTGTTTCGCACATTAATTCAATTCATAAAATAAATGAAATATTTGAAATTGACACATATTCCT  >  1/1524738‑1525224
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                     
tgtgGCGTCGTTACGACCAACTTCTTTATCTATTTCCGGTTTATCCAATTACATTACTTTCTTAAGGGAGACGGGACAGGATTCCAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGtgaatg                                                                                                                                                                                                                                              <  1:569163/251‑1 (MQ=255)
       tcgtTACGACCAACTTCTTTATCTATTTCCGGTTTATCCAATTACATTACTTTCTTAAGGGAGACGGGACAGGATTCCAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAattat                                                                                                                                                                                                                                        <  1:10125/250‑1 (MQ=255)
            aCGACCAACTTCTTTATCTATTTCCGGTTTATCCAATTACATTACTTTCTTAAGGGAGACGGGACAGGATTCCAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTa                                                                                                                                                                                                                                  >  1:503814/1‑251 (MQ=255)
                           aTCTATTTCCGGTTTATCCAATTACATTACTTTCTTAAGGGAGACGGGACAGGATTCCAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCagtttagttt                                                                                                                                                                                                                   >  1:99202/1‑251 (MQ=255)
                               aTTTCCGGTTTATCCAATTACATTACTTTCTTAAGGGAGACGGGACAGGATTCCAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTgaatgaat                                                                                                                                                                                                                                           >  1:211785/1‑223 (MQ=255)
                                 ttCCGGTTTATCCAATTACATTACTTTCTTAAGGGAGACGGGACAGGATTCCAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTT‑GAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAacac                                                                                                                                                                                                            <  1:879258/251‑1 (MQ=255)
                                  tCCGGTTTATCCAATTACATTACTTTCTTAAGGGAGACGGGACAGGATTCCAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAacac                                                                                                                                                                                                            <  1:606145/251‑1 (MQ=255)
                                      gTTTATCCAATTACATTACTTTCTTAAGGGAGACGGGACAGGATTCCAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAAcaccac                                                                                                                                                                                                         <  1:795693/250‑1 (MQ=255)
                                           tCCAATTACATTACTTTCTTAAGGGAGACGGGACAGGATTCCAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAac                                                                                                                                                                                                              <  1:582569/240‑1 (MQ=255)
                                                   cattacTTTCTTAAGGGAGACGGGACAGGATTCCAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAatt                                                                                                                                                                                                                                          >  1:299452/1‑204 (MQ=255)
                                                        cTTTCTTAAGGGAGACGGGACAGGATTCCAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTc                                                                                                                                                                                                                             <  1:759899/212‑1 (MQ=255)
                                                          ttCTTAAGGGAGACGGGACAGGATTCCAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTaa                                                                                                                                                                                                                                 <  1:239308/206‑1 (MQ=255)
                                                           tCTTAAGGGAGACGGGACAGGATTCCAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATg                                                                                                                                                                                   >  1:112904/1‑251 (MQ=255)
                                                            cTTAAGGGAGACGGGACAGGATTCCAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAacac                                                                                                                                                                                                            >  1:603181/1‑225 (MQ=255)
                                                            cTTAAGGGAGACGGGACAGGATTCCAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATg                                                                                                                                                                                   >  1:741032/1‑250 (MQ=255)
                                                               aaGGGAGACGGGACAGGATTCCAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAac                                                                                                                                                                                                              >  1:697846/1‑220 (MQ=255)
                                                                    agaCGGGACAGGATTCCAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCag                                                                                                                                                                                                                           >  1:614484/1‑202 (MQ=255)
                                                                         ggACAGGATTCCAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTgg                                                                                                                                                                                                                                                    >  1:382728/1‑172 (MQ=255)
                                                                         ggACAGGATTCCAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTgg                                                                                                                                                                                                                                                    <  1:494865/172‑1 (MQ=255)
                                                                         ggACAGGATTCCAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAac                                                                                                                                                                                                              >  1:42091/1‑210 (MQ=255)
                                                                                   ccAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGtgaat                                                                                                                                                                                                                                               >  1:545405/1‑167 (MQ=255)
                                                                                                    aCCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTgg                                                                                                                                           >  1:678884/1‑250 (MQ=255)
                                                                                                                   ttattCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTa                                                                                                                           <  1:510415/251‑1 (MQ=255)
                                                                                                                      ttCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGc                                                                                                                        <  1:787701/251‑1 (MQ=255)
                                                                                                                            ccGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAg                                                                                                                   <  1:298296/250‑1 (MQ=255)
                                                                                                                                         gAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTc                                                                                                                                                                    <  1:13760/188‑1 (MQ=255)
                                                                                                                                             cATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGgttg                                                                                                                                               <  1:138284/205‑1 (MQ=255)
                                                                                                                                             cATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGc                                                                                                 <  1:832812/251‑1 (MQ=255)
                                                                                                                                              atgatgatgTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAg                                                                                                                                                                              <  1:546872/173‑1 (MQ=255)
                                                                                                                                              atgatgatgTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATg                                                                                                  >  1:387838/1‑249 (MQ=255)
                                                                                                                                                    atgTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGttttt                                                                                          >  1:408195/1‑251 (MQ=255)
                                                                                                                                                     tgTTGGCGCTGTCCTTTATTTTCGGACCGTCGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTa                                                                                         >  1:775691/1‑251 (MQ=255)
                                                                                                                                                               gTCCTTTATTTTCGGGCCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATc                                                                                                                                                                                               >  1:735743/1‑139 (MQ=255)
                                                                                                                                                               gTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTa                                                                                                                           <  1:559989/207‑1 (MQ=255)
                                                                                                                                                               gTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGa                                                                               >  1:773324/1‑251 (MQ=255)
                                                                                                                                                               gTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGa                                                                               >  1:320629/1‑251 (MQ=255)
                                                                                                                                                                  cTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATAc                                                                            <  1:385750/251‑1 (MQ=255)
                                                                                                                                                                    ttATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACAt                                                                          <  1:628199/251‑1 (MQ=255)
                                                                                                                                                                       ttttCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATaaaaaa                                                                                                    >  1:562565/1‑222 (MQ=255)
                                                                                                                                                                               ccGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATAc                                                                            <  1:64740/238‑1 (MQ=255)
                                                                                                                                                                                cGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACATCGCGGGCTTTTg                                                              <  1:813037/251‑1 (MQ=255)
                                                                                                                                                                                 gTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGc                                                                                                 <  1:570747/215‑1 (MQ=255)
                                                                                                                                                                                 gTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACATCGCGGGCTTTTGt                                                             >  1:230720/1‑251 (MQ=255)
                                                                                                                                                                                  ttGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGgttgtt                                                                                                                                             <  1:359125/170‑1 (MQ=255)
                                                                                                                                                                                   tGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACATCGCGGGCTTTTGttt                                                           <  1:195389/251‑1 (MQ=255)
                                                                                                                                                                                       cAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACATCGCGGGCTTTTGTTTCGca                                                       >  1:119198/1‑251 (MQ=255)
                                                                                                                                                                                         gCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTaa                                                                                        >  1:805133/1‑216 (MQ=255)
                                                                                                                                                                                         gCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACATCGCGGGCTTTTGTTTCGcaca                                                     >  1:720639/1‑251 (MQ=255)
                                                                                                                                                                                                tGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACATCGCGGGCTTTTGTTTCGCACATTaattc                                              <  1:597954/251‑1 (MQ=255)
                                                                                                                                                                                                 gCAGGCGCCCGTATCCGTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACATCGCGGGCTTTTGTTTCGCACATTaattc                                              <  1:681863/250‑1 (MQ=255)
                                                                                                                                                                                                      cgcCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACATCGCGGGCTTTTGTTTCGCACATTaattcaattc                                         <  1:707629/250‑1 (MQ=255)
                                                                                                                                                                                                        cccGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAg                                                                                      <  1:262329/203‑1 (MQ=255)
                                                                                                                                                                                                        cccGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACAt                                                                          <  1:472909/215‑1 (MQ=255)
                                                                                                                                                                                                                              cTTCGGCTTCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACATCGCGGGCTTTTGTTTCGCACATTAATTCAATTCATAAAATAAATGAAATATTTGAAAt                <  1:895264/251‑1 (MQ=255)
                                                                                                                                                                                                                                     ttCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACATCGCGGGCTTTTGTTTCGCACATTAATTCAATTCATAAAATAAATGAAATATTTGAAAt                <  1:161935/244‑1 (MQ=255)
                                                                                                                                                                                                                                     ttCCTGTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACATCGCGGGCTTTTGTTTCGCACATTAATTCAATTCATAAAATAAATGAAATATTTGAAATTGAcaca         >  1:576538/1‑251 (MQ=255)
                                                                                                                                                                                                                                      tCCTATTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACATCGCGGGCTTTTGttt                                                           >  1:242424/1‑200 (MQ=255)
                                                                                                                                                                                                                                          gTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCgg                                                                                                                                                                                             <  1:597840/66‑1 (MQ=255)
                                                                                                                                                                                                                                          gTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAat                                                                                                                                                               <  1:386346/96‑1 (MQ=255)
                                                                                                                                                                                                                                          gTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTa                                                                                                                           <  1:533928/132‑1 (MQ=255)
                                                                                                                                                                                                                                          gTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACAt                                                                          >  1:432598/1‑181 (MQ=255)
                                                                                                                                                                                                                                          gTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACATCGCGGGCTTTTGTTTCGCACATTAATTCAATTCataaaata                                 >  1:306548/1‑222 (MQ=255)
                                                                                                                                                                                                                                          gTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACATCGCGGGCTTTTGTTTCGCACATTAATTCAATTCATAAAATAAATGAAATATTTGAAATTGACACATAtt     >  1:39597/1‑250 (MQ=255)
                                                                                                                                                                                                                                          gTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACATCGCGGGCTTTTGTTTCGCACATTAATTCAATTCATAAAATAAATGAAATATTTGAAATTGACACATAtt     >  1:324454/1‑250 (MQ=255)
                                                                                                                                                                                                                                          gTTCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACATCGCGGGCTTTTGTTTCGCACATTAATTCAATTCATAAAATAAATGAAATATTTGAAATTGACACATAtt     >  1:279967/1‑250 (MQ=255)
                                                                                                                                                                                                                                           ttCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACATCGCGGGCTTTTGTTTCGCACATTAATTCAATTCATAAAATAAATGAAATATTTGAAATTGACACATATTcc   <  1:720897/251‑1 (MQ=255)
                                                                                                                                                                                                                                            tCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACAt                                                                          <  1:901877/179‑1 (MQ=255)
                                                                                                                                                                                                                                            tCTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACATCGCGGGCTTTTGTTTCGcac                                                      >  1:458791/1‑199 (MQ=255)
                                                                                                                                                                                                                                             cTATGTGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACATCGCGGGCTTTTGTTTCGCACATTAATTCAATTCATAAAATAAATGAAATATTTGAAATTGACACATATTCCt  >  1:344030/1‑250 (MQ=255)
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                     
TGTGGCGTCGTTACGACCAACTTCTTTATCTATTTCCGGTTTATCCAATTACATTACTTTCTTAAGGGAGACGGGACAGGATTCCAAAAATTTCGAGCTAACCTATTGGCGTAAATTATTCCAGCCGATTTCGGTTGGAGTCATGATGATGTTGGCGCTGTCCTTTATTTTCGGACCGTTGCGCAGCGTGACTGCAGGCGCCCGTATCCTTATCGGGATTTGCTTCGGCTTCCTGTTCTATATGGTGAATGAATTATTTGGTAAATTCAGTTTAGTTTATAACACCACGCCGCTTATCGGCGCGCTGATGCCGAGTGTGCTGTTCCTAATCATCACTTGGTGGTTGTTGGCACGACGACGTAATTAGGCAAAAGTGCGGTCATAAAAAATGCTGTTTTTAAAGCCCGTGATACATCGCGGGCTTTTGTTTCGCACATTAATTCAATTCATAAAATAAATGAAATATTTGAAATTGACACATATTCCT  >  1/1524738‑1525224

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑