| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,515,541 | A→G | intergenic (‑70913/‑126223) | unknown ← / → unknown | tRNA‑Met‑CAT/tRNA‑Gly‑GCC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,515,541 | 0 | A | G | 98.5% | 185.3 / ‑5.4 | 67 | intergenic (‑70913/‑126223) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Gly‑GCC |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (22/44); minor base C (0/1); total (22/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AATAAAAACCAGCCATTTTTTTGCCTGTTTGGATCGCTTGAGATTGATTCAGCGCTGGTCGCTTATGCGTAATATTGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCACGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCAATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACATATTGTGAAACAGGCAGATTTAATCTGTGCTTATATCAAGGTGAAATTTGAACTGGGAAATGGTAATCAGGAATTTAGATCGGCAAAAGTG > 1/1515298‑1515781 | aaTAAAAACCAGCCATTTTTTTGCCTGTTTGGATCGCTTGAGATTGATTCAGCGCTGGTCGCTTATGCGTAATATTGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAat > 1:867849/1‑251 (MQ=255) tttttttGCCTGTTTGGATCGCTTGAGATTGATTCAGCGCTGGTCGCTTATGCGTAATATTGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATAttt > 1:510093/1‑240 (MQ=255) ttGCCTGTTTGGATCGCTTGAGATTGATTCAGCGCTGGTCGCTTATGCGTAATATTGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTAcc < 1:405206/251‑1 (MQ=255) gTTTGGATCGCTTGAGATTGATTCAGCGCTGGTCGCTTATGCGTAATATTGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCAATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATg > 1:436838/1‑249 (MQ=255) tCGCTTGAGATTGATTCAGCGCTGGTCGCTTATGCGTAATATCGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTacaaac < 1:351251/251‑1 (MQ=255) cTTGAGATTGATTCAGCGCTGGTCGCTTATGCGTAATATTGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTAcaaacaaa > 1:491257/1‑251 (MQ=255) gattgattCAGCGCTGGTCGCTTATGCGTAATATTGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCt < 1:709068/236‑1 (MQ=255) attgattCAGCGCTGGTCGCTTATGCGTAATATTGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTgag < 1:688010/250‑1 (MQ=255) ttgattCAGCGCTGGTCGCTTATGCGTAATATTGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACGGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGAc < 1:347696/251‑1 (MQ=255) tCGCTTATGCGTAATATTGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCa > 1:736748/1‑251 (MQ=255) cTTATGCGTAATATTGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCAttt > 1:596209/1‑251 (MQ=255) aTGCGTAATATTGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTacaa < 1:797913/218‑1 (MQ=255) tGCGTAATATTGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATc < 1:339632/251‑1 (MQ=255) gCGTAATATTGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGAtt < 1:665358/202‑1 (MQ=255) gCGTAATATTGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGAc > 1:672757/1‑228 (MQ=255) gCGTAATATTGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCa > 1:119805/1‑251 (MQ=255) gCGTAATATTGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCa > 1:557678/1‑251 (MQ=255) gCGTAATATTGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCa > 1:206415/1‑251 (MQ=255) gTAATATTGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATc < 1:203403/248‑1 (MQ=255) aaTATTGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGttt < 1:797934/251‑1 (MQ=255) atTGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTttgtt > 1:887786/1‑251 (MQ=255) ggAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGgaag > 1:743713/1‑251 (MQ=255) gCTTACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGG‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTa > 1:208659/1‑251 (MQ=255) ttACAGGTGGCATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTAcc < 1:217756/251‑1 (MQ=255) cATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGa < 1:121933/250‑1 (MQ=255) cATTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGAt < 1:290522/251‑1 (MQ=255) aTTTGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATa < 1:203941/251‑1 (MQ=255) tttGTCGGGCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAg < 1:99399/251‑1 (MQ=255) ggCATGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAag > 1:715238/1‑141 (MQ=255) gccttagccttaATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAAt > 1:616694/1‑161 (MQ=255) gccttagccttaATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTAccc > 1:312771/1‑228 (MQ=255) ccttagccttaATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGc > 1:389165/1‑198 (MQ=255) ccttagccttaATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTAccc < 1:382653/227‑1 (MQ=255) aaaaTCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACat < 1:457901/251‑1 (MQ=255) aaTCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACatat < 1:770853/251‑1 (MQ=255) tttttACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACATATtgtg < 1:558733/250‑1 (MQ=255) tttACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACATATTGTGaaa < 1:11194/251‑1 (MQ=255) gTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGAt < 1:140962/206‑1 (MQ=255) gCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATc < 1:256381/156‑1 (MQ=255) caACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCa > 1:187386/1‑110 (MQ=255) aCTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGAtt < 1:660098/182‑1 (MQ=255) aCTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACATATTGTGAAACAGGCAGATTTaa > 1:200770/1‑251 (MQ=255) tGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACATATTGTGAAACAGGCAGATTTAATc < 1:36376/251‑1 (MQ=255) tGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACATATTGTGAAACAGGCAGATTTAATc < 1:276243/251‑1 (MQ=255) tGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACATATTGTGAAACAGGCAGATTTAATc < 1:728786/251‑1 (MQ=255) tGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACATATTGTGAAACAGGCAGATTTAATc < 1:759361/251‑1 (MQ=255) tGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACATATTGTGAAACAGGCAGATTTAATc < 1:411816/251‑1 (MQ=255) aTGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACATATTGTGAAAc > 1:42650/1‑234 (MQ=255) gCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCa < 1:890162/197‑1 (MQ=255) gcgcATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACATATTGTGAAACAGGCAGATTTAATc < 1:151444/241‑1 (MQ=255) cATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACATATTGTGAAACAGGCAGATTTAATCTGTGCTTATATc < 1:857858/250‑1 (MQ=255) gATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACATATTGTGAAACAGGCAGATTTAATc > 1:650567/1‑229 (MQ=255) gCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTAc < 1:841507/160‑1 (MQ=255) tATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTAc < 1:453079/154‑1 (MQ=255) tATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACat < 1:260211/195‑1 (MQ=255) aTCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACATATTGTGAAACAGGCAGATTTAATCTGTGCTTATATCAAGGTGAAATTTGAACTGGGa < 1:514734/251‑1 (MQ=255) acacATCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACATATTGTGAAACAGGCAGATTTAATCTGTGCTTATATCAAGGTGAAATTTGAACTGGGAAATgg < 1:120236/250‑1 (MQ=255) aTCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACATATTGTGAAACAGGCAGATTTAATCTGTGCTTATATCAAGGTGAAATTTGAACTGGGAAATGGTAATc < 1:547772/251‑1 (MQ=255) aTCGGAAATTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACATATTGTGAAACAGGCAGATTTAATCTGTGCTTATATCAAGGTGAAATTTGAACTGGGAAATGGTAATc < 1:857923/251‑1 (MQ=255) gaaattttttACC‑GCCATCTGCCGACCCCCATTAAATAATTCAATGAAGAGATTTCCCATGCTTACAAACCAATTGAGGCCGGCGGCGAGGTTG‑ATTTGATTAGGTTGTTGCCGGAAGAATTGCCGGGAGATTTTTTACCCTAACTGGATAGGCCCTAATTTTCGGATGATGAAAAAAATATTTGGAAACAGGCAGATTTAATCTGTGCTTATATCAAGGTGAAATTTGAACTGGGAAATGGTAATCAgg < 1:482940/245‑1 (MQ=255) aaTTTTTACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACATATTGTGAAACAGGCAGATTTAATCTGTGCTTATATCAAGGTGAAATTTGAACTGGGAAATGGTAATCAGGAAt < 1:159268/251‑1 (MQ=255) ttACCGGCGATCTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACATATTGTGAAACAGGCAGATTTAATCTGTGCTTATATCAAGGTGAAATTTGAACTGGGAAATGGTAATCAGGAATTTAGa < 1:409910/251‑1 (MQ=255) gaacTGCCGACACCGATCAAATACTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACATATTGTGAAACAGGCAAATTTAATCTGGGCTTATATCAAGGTGAAATTTGAACTGGGAAATGGTaa < 1:706774/227‑1 (MQ=255) cTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAg < 1:647576/86‑1 (MQ=255) cTGCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAg < 1:799049/134‑1 (MQ=255) gCCGACACCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACATATTGTGAAACAGGCAGATTTAATCTGTGCTTATATCAAGGTGAAATTTGAACTGGGAAATGGTAATCAGGAATTTAGATCGGCAAAAGTg > 1:171305/1‑250 (MQ=255) acacCGATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGAt < 1:557730/126‑1 (MQ=255) | AATAAAAACCAGCCATTTTTTTGCCTGTTTGGATCGCTTGAGATTGATTCAGCGCTGGTCGCTTATGCGTAATATTGAACGGGAAAATCTGGCGGAACATAGCTTACAGGTGGCATTTGTCGGGCACGCCTTAGCCTTAATTAAAAATCGTTTTTACGGTGCACAACTGAATGCAGAGCGCATTGCGGTGATGGCGATGTATCACGACACATCGGAAATTTTTACCGGCGATCTGCCGACACCAATCAAATATTTCAATGAAGAGATTACCCATGCTTACAAACAAATTGAGACCGCTGCCGA‑GTTGCATTTGATCAGTTTGTTGCCGGAAGAATTGCAGGCAGATTTTTTACCCTATCTGGATAGTCACTATTTTTCGGATGATGAAAAACATATTGTGAAACAGGCAGATTTAATCTGTGCTTATATCAAGGTGAAATTTGAACTGGGAAATGGTAATCAGGAATTTAGATCGGCAAAAGTG > 1/1515298‑1515781 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |