Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,506,578 G→A intergenic (‑61950/‑135186) unknown ← / → unknown tRNA‑Met‑CAT/tRNA‑Gly‑GCC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,506,5780GA100.0% 145.8 / NA 53intergenic (‑61950/‑135186)unknown/unknowntRNA‑Met‑CAT/tRNA‑Gly‑GCC
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (28/25);  total (28/25)

AAGTTCGAATGACGATTAATATGCCGTTATGGTCAATGTCCAGCACTAAATCTCTTAATGACGTTTGAGTATTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCGTAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAGTGGCTGAATTTTGCATAAAAGCAGTGACTTTAGCAAATAAATATTTAATTAAAACGGAAAAGTGCGGTCATAAAAAATTATGTTTTTTGTGATTTTTATGTTCAATAGAAAATAAAAAATTTGAGTTAGATCGCACATTTGCACCTGCCTGTTTGAATT  >  1/1506332‑1506813
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                           
aaGTTCGAATGACGATTAATATGCCGTTATGGTCAATGTCCAGCACTAAATCTCTTAATGACGTTAGAGTATTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCAtaat                                                                                                                                                                                                                                         <  1:326801/251‑1 (MQ=255)
   ttCGAATGACGATTAATATGCCGTTATGGTCAATGTCCAGCACTAAATCTCTTAATGACGTTAGAGTATTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCAtaataa                                                                                                                                                                                                                                       <  1:423823/250‑1 (MQ=255)
     cGAATGACGATTAATATGCCGTTATGGTCAATGTCCAGCACTAAATCTCTTAATGACGTTAGAGTATTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGt                                                                                                                                                                                                                                    <  1:283961/251‑1 (MQ=255)
              aTTAATATGCCGTTATGGTCAATGTCCAGCACTAAATCTCTTAATGACGTTAGAGTATTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGt                                                                                                                                                                                                                                    >  1:588682/1‑242 (MQ=255)
               ttAATATGCCGTTATGGTCAATGTCCAGCACTAAATCTCTTAATGACGTTAGAGTATTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATg                                                                                                                                                                                                                            >  1:409564/1‑249 (MQ=255)
                     tGCCGTTATGGTCAATGTCCAGCACTAAATCTCTTAATGACGTTAGAGTATTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGAcc                                                                                                                                                                                                                    <  1:446686/251‑1 (MQ=255)
                         gTTATGGTCAATGTCCAGCACTAAATCTCTTAATGACGTTAGAGTATTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGAt                                                                                                                                                                                                                >  1:373906/1‑251 (MQ=255)
                               gTCAATGTCCAGCACTAAATCTCTTAATGACGTTAGAGTATTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTcc                                                                                                                                                                                                           <  1:784060/250‑1 (MQ=255)
                                  aaTGTCCAGCACTAAATCTCTTAATGACGTTAGAGTATTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGAt                                                                                                                                                                                                       <  1:611585/251‑1 (MQ=255)
                                          gCACTAAATCTCTTAATGACGTTAGAGTATTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGttt                                                                                                                                                                                                                                  >  1:123193/1‑216 (MQ=255)
                                          gCACTAAATCTCTTAATGACGTTAGAGTATTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTAtt                                                                                                                                                                                                >  1:111567/1‑250 (MQ=255)
                                                    tctTAATGACGTTAGAGTATTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGtt                                                                                                                                                                                     <  1:575379/251‑1 (MQ=255)
                                                     ctTAATGACGTTAGAGTATTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGttt                                                                                                                                                                                                                                  >  1:732152/1‑205 (MQ=255)
                                                     ctTAATGACGTTAGAGTATTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGttt                                                                                                                                                                                    >  1:115094/1‑251 (MQ=255)
                                                         aTGACGTTAGAGTATTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGtct                                                                                                                                                                                <  1:878204/251‑1 (MQ=255)
                                                            aCGTTAGAGTATTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGAcc                                                                                                                                                                                                                    <  1:846742/212‑1 (MQ=255)
                                                             cGTTAGAGTATTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGtct                                                                                                                                                                                >  1:844515/1‑247 (MQ=255)
                                                              gttagAGTATTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGc                                                                                                                                                                                                                           <  1:773630/199‑1 (MQ=255)
                                                                    gTATTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGaa                                                                                                                                                                       >  1:896808/1‑249 (MQ=255)
                                                                      aTTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGc                                                                                                                                                                                                                           >  1:557069/1‑195 (MQ=255)
                                                                      aTTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAgg                                                                                                                                                                                       <  1:156847/231‑1 (MQ=255)
                                                                          ggCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGtc                                                                                                                                                                                 >  1:620701/1‑233 (MQ=255)
                                                                              cGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAGTgg                                                                                                                                                              >  1:252174/1‑248 (MQ=255)
                                                                               gCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATGATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGaa                                                                                                                                                                       >  1:449739/1‑238 (MQ=255)
                                                                                  gAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTATGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAg                                                                                                                                                                 <  1:650656/241‑1 (MQ=255)
                                                                                    gTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAGTGGc                                                                                                                                                             >  1:684503/1‑243 (MQ=255)
                                                                                           cGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAGTGGCTGAATTTTGCAt                                                                                                                                                 <  1:839077/248‑1 (MQ=255)
                                                                                             gTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAg                                                                                                                                                                 >  1:87204/1‑230 (MQ=255)
                                                                                             gTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAg                                                                                                                                                                 <  1:811649/230‑1 (MQ=255)
                                                                                              tAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATGCAACATAGGTTTGTCTCTTGTGGAACATAAGTGGCTGAATTTTGCATAAAAg                                                                                                                                            <  1:679945/250‑1 (MQ=255)
                                                                                                    aTACACCATTTCCATACGCGTGTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAGTGGCTGAATTTTGCATAAAAGCAGTg                                                                                                                                       <  1:573694/251‑1 (MQ=255)
                                                                                                    aTACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAg                                                                                                                                                                 >  1:891234/1‑223 (MQ=255)
                                                                                                       cacCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGt                                                                                                                                                                                  <  1:504167/203‑1 (MQ=255)
                                                                                                         ccATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAGTGGCTGAATTTTGCATAAAAGCAGGGACTTTAg                                                                                                                                <  1:457764/251‑1 (MQ=255)
                                                                                                             ttCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGAcc                                                                                                                                                                                                                    >  1:428368/1‑163 (MQ=255)
                                                                                                             ttCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAGTGGCTGAATTTTGCATAAAAg                                                                                                                                            >  1:693974/1‑235 (MQ=255)
                                                                                                                    cgc‑‑gTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAGTGGCTGAATTTTGCATAAAAGCAGTGACTTTAGCAAATAAatat                                                                                                                     <  1:122815/251‑1 (MQ=255)
                                                                                                                         gtgtTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGt                                                                                                                                                                                      >  1:149649/1‑183 (MQ=255)
                                                                                                                         gtgtTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAg                                                                                                                                                                 <  1:28573/204‑1 (MQ=255)
                                                                                                                          tgtTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAGTGGCTGAATTTTGCATAAAAGCAGTGACTTTAGc                                                                                                                               <  1:551537/237‑1 (MQ=255)
                                                                                                                          tgtTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAGTGGCTGAATTTTGCATAAAAGCAGTGACTTTAGCAAATAAATATttaa                                                                                                                 >  1:646772/1‑251 (MQ=255)
                                                                                                                          tgtTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAGTGGCTGAATTTTGCATAAAAGCAGTGACTTTAGCAAATAAATATttaa                                                                                                                 >  1:320147/1‑251 (MQ=255)
                                                                                                                          tgtTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGCATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAGTGGCTGAATTTTGCATAAAAGCAGTGACTTTAg                                                                                                                                >  1:495331/1‑236 (MQ=255)
                                                                                                                                  gTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAGTGGCTGAATTTTGCATAAAAGCAGTGACTTTAGCAAATAAATATTTAATTAAAAc                                                                                                          <  1:108420/250‑1 (MQ=255)
                                                                                                                                                gAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAGTGGCTGAATTTTGCATAAAAGCAGTGAc                                                                                                                                     >  1:578844/1‑209 (MQ=255)
                                                                                                                                                              tACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAGTGGCTGAATTTTGCATAAAAGCAGTGACTTTAGCaa                                                                                                                             >  1:705997/1‑203 (MQ=255)
                                                                                                                                                              tACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAGTGGCTGAATTTTGCATAAAAGCAGTGACTTTAGCAAATAAatat                                                                                                                     >  1:554074/1‑211 (MQ=255)
                                                                                                                                                                  ggATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGtt                                                                                                                                                                                     >  1:456732/1‑143 (MQ=255)
                                                                                                                                                                  ggATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACAt                                                                                                                                                                    >  1:606929/1‑160 (MQ=255)
                                                                                                                                                                                ggTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAGTGGCTGAATTTTGCATAAAAGCAGTGACTTTAGCAAATAAATATTTAATTAAAACAGAAAAGTGCGGTCATAAAAAATTATGTTTTTTGTGATTTTTATGtt                                                           >  1:53703/1‑251 (MQ=255)
                                                                                                                                                                                         tACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAGTGGCTGAATTTTGCATAAAAGCAGTGACTTTAGCAAATAAATATTTAATTAAAACAGAAAAGTGCGGTCATAAAAAATTATGTTTTTTGTGATTTTTATGTTCAATAGaaa                                                  <  1:865667/251‑1 (MQ=255)
                                                                                                                                                                                                 ccAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTc                                                                                                                                                                                               <  1:140119/102‑1 (MQ=255)
                                                                                                                                                                                                                                         cGTATTTTTCTTCGCATAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAGTGGCTGAATTTTGCATAAAAGCAGTGACTTTAGCAAATAAATATTTAATTAAAACAGAAAAGTGCGGTCATAAAAAATTATGTTTTTTGTGATTTTTATGTTCAATAGAAAATAAAAAATTTGAGTTAGATCGCACATTTGCACCTGCCTGTTTGAAtt  <  1:257806/251‑1 (MQ=255)
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                           
AAGTTCGAATGACGATTAATATGCCGTTATGGTCAATGTCCAGCACTAAATCTCTTAATGACGTTTGAGTATTCGGCACGCTGAGTTCGCTCGGTAGGCAATACACCATTTCCATACGC‑‑GTGTTACGGGTGCGCACGGCGCCGAATTTGCTGAGCATACGGGATACTTTCGATTGGTTTACGCTACGAAAACCAAGTTTTTGAAGCTCGGCGGCAATTTCCGTTTGTGAACCGTATTTTTCTTCGCGTAATAAAGTTTTAAATGCTTTGACCAGATTGTCCGGATTTTTATTCAACATAGGTTTGTCTCTTGTGGAACATAAGTGGCTGAATTTTGCATAAAAGCAGTGACTTTAGCAAATAAATATTTAATTAAAACGGAAAAGTGCGGTCATAAAAAATTATGTTTTTTGTGATTTTTATGTTCAATAGAAAATAAAAAATTTGAGTTAGATCGCACATTTGCACCTGCCTGTTTGAATT  >  1/1506332‑1506813

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑