| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,486,989 | A→G | intergenic (‑42361/‑154775) | unknown ← / → unknown | tRNA‑Met‑CAT/tRNA‑Gly‑GCC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,486,989 | 0 | A | G | 98.8% | 231.6 / NA | 82 | intergenic (‑42361/‑154775) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Gly‑GCC |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (36/45); total (37/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTATATCAGCGCCGCGCCGCGCGTCTAAGAGAATTGGCGCAAGATCACCCGCTCGCCAATTATTTGCTGTTCGCCGCCGCTATCGCAGATGCGCAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAAACCTTCCGCCAACGATCAAATGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTAGTCCAACAGATTCCCTACAACGCCAAACAGGAAAGCACCGAAAACCTGCACATCTGCCCTGTTTGCAGCTCTGCGC > 1/1486742‑1487234 | ttATATCAGCGCCGCGCCGCGCGTCTAAGAGAATTGGCGCAAGATCACCCGCTCGCCAATTATTTGCTGTTCGCCGCCGCTATCGCAGATGCGCAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGAcc < 1:630029/251‑1 (MQ=255) cgTCTAAGAGAATTGGCGCAAGATCACCCGCTCGCCAATTATTTGCTTTTCGCCGCCGCTATCGCAGATGCGCAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCaaacgc < 1:310671/250‑4 (MQ=255) cgTCTAAGAGAATTGGCGCAAGATCACCCGCTCGCCAATTATTTGCTGTTCGCCGCCGCTATCGCAGATGCGCAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCaaacg > 1:622378/1‑247 (MQ=255) tAAGAGAATTGGCGCAAGATCACCCGCTCGCCAATTATTTGCTGTTCGCCGCCGCTATCGCAGATGCGCAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGc > 1:624422/1‑250 (MQ=255) agaATTGGCGCAAGATCACCCGCTCGCCAATTATTTGCTGTTCGCCGCCGCTATCGCAGATGCGCAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGccac < 1:558088/249‑1 (MQ=255) tGGCGCAAGATCACCCGCTCGCCAATTATTTGCTGTTCGCCGCCGCTATCGCAGATGCGCAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGaa > 1:824684/1‑251 (MQ=255) ggCGCAAGATCACCCGCTCGCCAATTATTTGCTGTTCGCCGCCGCTATCGCAGATGCGCAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGCGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGccac > 1:849301/1‑243 (MQ=255) gcgcAAGATCACCCGCTCGCCAATTATTTGCTGTTCGCCGCCGCTATCGCAGATGCGCAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAAt > 1:439752/1‑250 (MQ=255) gcgcAAGATCACCCGCTCGCCAATTATTTGCTGTTCGCCGCCGCTATCGCAGATGCGCAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATg > 1:416828/1‑251 (MQ=255) aGATCACCCGCTCGCCAATTATTTGCTGTTCGCCGCCGCTATCGCAGATGCGCAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTgg > 1:674470/1‑251 (MQ=255) aGATCACCCGCTCGCCAATTATTTGCTGTTCGCCGCCGCTATCGCAGATGCGCAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTgg > 1:458663/1‑251 (MQ=255) cGCCAATTATTTGCTGTTCGCCGCCGCTATCGCAGATGCGCAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAg < 1:485227/251‑1 (MQ=255) ccAATTATTTGCTGTTCGCCGCCGCTATCGCAGATGCGCAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGAc < 1:440329/251‑1 (MQ=255) attattTGCTGTTCGCCGCCGCTATCGCAGATGCGCAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAg > 1:158411/1‑250 (MQ=255) ccgccgcTATCGCAGATGCGCAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCt < 1:349123/250‑1 (MQ=255) gcTATCGCAGATGCGCAGCTGGAACTCTTGGAAACCATGCCGATGCCGCAGGATCCGCGTTTACAGGCACTCTCTGTCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAAAc > 1:453098/1‑172 (MQ=255) cTATCGCAGATGCGCAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGAt > 1:592535/1‑251 (MQ=255) tCGCAGATGCGCAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAg > 1:875605/1‑251 (MQ=255) cGCAGATGCGCAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTgg > 1:390220/1‑233 (MQ=255) cgcAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGca < 1:410328/251‑1 (MQ=255) cgcAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGc < 1:56810/250‑1 (MQ=255) cgcAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGc < 1:195946/250‑1 (MQ=255) tGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGaa < 1:715671/251‑1 (MQ=255) ctTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTTAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCgg > 1:774964/1‑251 (MQ=255) ctTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGc < 1:22687/249‑1 (MQ=255) ctTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCgg < 1:780587/251‑1 (MQ=255) ctTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCgg > 1:766137/1‑251 (MQ=255) tGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGc < 1:457107/226‑1 (MQ=255) tGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAg > 1:857075/1‑250 (MQ=255) aTTCCGCAGGATCCGCGTTTACACGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGAcga > 1:874691/1‑249 (MQ=255) gCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCgg > 1:821155/1‑251 (MQ=255) ggATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCGACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTgg > 1:654054/1‑188 (MQ=255) ggATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGgtgt > 1:824103/1‑251 (MQ=255) aTCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGtt < 1:791042/250‑1 (MQ=255) cgcgTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCgtg < 1:823842/251‑1 (MQ=255) cgcgTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCgtg < 1:17536/251‑1 (MQ=255) cgcgTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCgtg < 1:896671/251‑1 (MQ=255) cgTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCaaac < 1:769550/134‑2 (MQ=255) cgTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTcc < 1:188615/228‑1 (MQ=255) cgTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGtgtg < 1:66274/251‑1 (MQ=255) tttACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTggg > 1:697089/1‑251 (MQ=255) tttACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTggg < 1:889326/251‑1 (MQ=255) ctctctGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAGGCGGTGTTCGTGTGGGCGGCGctttc < 1:314127/251‑1 (MQ=255) tctctGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGctttct < 1:14878/251‑1 (MQ=255) ctGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTta > 1:142736/1‑251 (MQ=255) gCCGAACAATTGGGAAATAGGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACATTCCGCCAACGATCAAACGCTCGCAACCATCGAATGGcc > 1:127302/1‑136 (MQ=255) gCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGAc > 1:731981/1‑153 (MQ=255) ccGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTatat < 1:130786/251‑1 (MQ=255) ccGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTatat < 1:304869/251‑1 (MQ=255) cGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATAtt < 1:727880/251‑1 (MQ=255) cAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGCTAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGtt > 1:424693/1‑251 (MQ=255) ggAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAAt < 1:805247/250‑1 (MQ=255) aaaTAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTa < 1:882809/250‑1 (MQ=255) gCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTAGTCCaa > 1:211320/1‑250 (MQ=255) ccTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCTCTTTTGGCGAAATTAAGGCCTACCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGc < 1:268469/167‑1 (MQ=255) ccTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTg < 1:9936/233‑1 (MQ=255) cTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTAGTCCAACAg < 1:666087/251‑1 (MQ=255) cTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTAGTCCAACAg < 1:827517/251‑1 (MQ=255) cTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTAGTCCAACAg < 1:703112/251‑1 (MQ=255) cGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGc > 1:266262/1‑171 (MQ=255) cGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAg < 1:846292/183‑1 (MQ=255) tAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTAGTCCAACAGATTCCCTACa < 1:296946/251‑1 (MQ=255) aaaGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTAGTCCAACAGATTCCCTACAAc < 1:353932/251‑1 (MQ=255) ccGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTAGTCCAACAGATTCCCTACAACGc < 1:491701/249‑1 (MQ=255) cGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTAGTCCAACAGATTCCCTACAACGCCAAACAGGa > 1:386083/1‑251 (MQ=255) ggATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCCCCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTatat < 1:857943/205‑1 (MQ=255) aTCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGggc > 1:144055/1‑187 (MQ=255) aTCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTAGTCCAACAGATTCCCTACAACGCCAAACAGGAAAg > 1:419937/1‑250 (MQ=255) cccATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTAGTcc > 1:198452/1‑217 (MQ=255) gAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGaa < 1:231147/132‑1 (MQ=255) gAATTATTGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTAGTCCAACAGATTCCCTACAACGCCAAACAGGAAAGCACCGAAAACCTGca > 1:273109/1‑251 (MQ=255) attattGACCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCgtg > 1:871684/1‑166 (MQ=255) aCCGCACTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTAGTCCAACAGATTCCCTACAACGCCAAACAGGAAAGCACCGAAAACCTGCACATCTGccc < 1:253878/251‑1 (MQ=255) cTTTTGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTAGTCCAACAGATTCCCTACAACGCCAAACAGGAAAGCACCGAAAACCTGCACATCTGCCCTGTTTg > 1:769583/1‑251 (MQ=255) tGGCGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTAGTCCAACAGATTCCCTACAACGCCAAACAGGAAAGCACCGAAAACCTGCACATCTGCCCTGTTTGCAGc < 1:819718/251‑1 (MQ=255) cGAAATTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTAGTCCAACAGATTCCCTACAACGCCAAACAGGAAAGCACCGAAAACCTGCACATCTGCCCTGTTTGCAGctc < 1:553780/250‑1 (MQ=255) aaTTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTatat < 1:98519/164‑1 (MQ=255) aaTTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTAGTCCAACAGATTCCCTACAACGCCAAACAGGAAAGCACCGAAAACCTGCACATCTGccc < 1:419864/235‑1 (MQ=255) aTTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTAGTCCAACAGATTCCCTACAACGCCAAACAGGAAAGCACCGAAAACCTGCACATCTGCCCTGTTTGCAGCTCTgcgc < 1:286057/251‑1 (MQ=255) aTTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTAGTCCAACAGATTCCCTACAACGCCAAACAGGAAAGCACCGAAAACCTGCACATCTGCCCTGTTTGCAGCTCTgcg > 1:505798/1‑250 (MQ=255) aTTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTAGTCCAACAGATTCCCTACAACGCCAAACAGGAAAGCACCGAAAACCTGCACATCTGCCCTGTTTGCAGCTCTgcg > 1:520597/1‑250 (MQ=255) aTTAAGACCTTCCGCCAACGATCAAACGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTAGTCCAACAGATTCCCTACAACGCCAAACAGGAAAGCACCGAAAACCTGCACATCTGCCCTGTTTGCAGCTCTgcg > 1:808510/1‑250 (MQ=255) | TTATATCAGCGCCGCGCCGCGCGTCTAAGAGAATTGGCGCAAGATCACCCGCTCGCCAATTATTTGCTGTTCGCCGCCGCTATCGCAGATGCGCAGCTGGAACTCTTGGAAACCATGCCGATTCCGCAGGATCCGCGTTTACAGGCACTCTCTGCCGAACAATTGGGAAATAAGCCTTTAGACGTTAAAAGCCGGCAACGGGATCCCATTTGGCGCGAATTATTGACCGCACTTTTGGCGAAATTAAAACCTTCCGCCAACGATCAAATGCTCGCCACCATCGAATGGCTGGAAAAAGCGGCAGACAGCGAATTGGAAAATCTTGCCGATAAGGTTTTAGCACAGGAATTTGCGGTGATTTCCAGCGACAAAGCGGTGTTCGTGTGGGCGGCGCTTTCTTTATATTGGTTGCAATTAGTCCAACAGATTCCCTACAACGCCAAACAGGAAAGCACCGAAAACCTGCACATCTGCCCTGTTTGCAGCTCTGCGC > 1/1486742‑1487234 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |