Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	26,688	C→T	intergenic (–/+104446)	– / ← unknown	–/tRNA‑Ala‑GGC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	26,688	0	C	T	100.0%	177.3 / NA	65	intergenic (–/+104446)	–/unknown	–/tRNA‑Ala‑GGC
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (43/22);  total (43/22)

AACCGATTTTAGCGCGGCATTCTATCATAAGGTGAAGGAACGGCGTAGGCGGGAAAGTACAAAATCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGCGCTGCTCATATTCATAAGGGCAACCAGTG‑TCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCAGGCGGCATTCGGGAATTTTTCTAAAATGGACGCCATGGCGTTGGAAGAAATCAGCGAGTTTTGTCCCACAAAAATCGCAATGCCAATTGCAATTGCCCAAAAGCCCAAATTCAGCAACA  >  1/26450‑26893                                                                                                                                                                                                                                                |                                                                                                                                                                                                               aaCCGATTTTAGCGCGGCATTCTATCATAAGGTGAAGGAACGGCGTAGGCGGGAAAGTACAAAATCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATAtt                                                                                                                                                                                                    <  1:158146/251‑1 (MQ=255)    cGATTTTAGCGCGGCATTCTATCATAAGGTGAAGGAACGGCGTAGGCGGGAAAGTACAAAATCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCAt                                                                                                                                                                                                 <  1:23661/251‑1 (MQ=255)                 gCATTCTATCATAAGGTGAAGGAACGGCGTAGGCGGGAAAGTACAAAATCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAACAAAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAg                                                                                                                                                                                     >  1:189767/1‑251 (MQ=255)                 gCATTCTATCATAAGGTGAAGGAACGGCGTAGGCGGGAAAGTACAAAATCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCatat                                                                                                                                                                                                     >  1:781773/1‑234 (MQ=255)                 gCATTCTATCATAAGGTGAAGGAACGGCGTAGGCGGGAAAGTACAAAATCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAg                                                                                                                                                                                     <  1:660220/250‑1 (MQ=255)                 gCATTCTATCATAAGGTGAAGGAACGGCGTAGGCGGGAAAGTACAAAATCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAg                                                                                                                                                                                     <  1:697625/250‑1 (MQ=255)                     tCTATCATAAGGTGAAGGAACGGCGTAGGCGGGAAAGTACAAAATCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAgtgatc                                                                                                                                                                                <  1:436167/251‑4 (MQ=255)                      cTATCATAAGGTGAAGGAACGGCGTAGGCGGGAAAGTACAAAATCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAgtgatcc                                                                                                                                                                               <  1:472401/251‑5 (MQ=255)                        aTCATAAGGTGAAGGAACGGCGTAGGCGGGAAAGTACAAAATCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTc                                                                                                                                                                                                         <  1:548827/223‑1 (MQ=255)                        aTCATAAGGTGAAGGAACGGCGTAGGCGGGAAAGTACAAAATCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAggg                                                                                                                                                                                            >  1:102774/1‑236 (MQ=255)                        aTCATAAGGTGAAGGAACGGCGTAGGCGGGAAAGTACAAAATCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCa                                                                                                                                                                             >  1:480970/1‑251 (MQ=255)                        aTCATAAGGTGAAGGAACGGCGTAGGCGGGAAAGTACAAAATCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCa                                                                                                                                                                             >  1:725647/1‑251 (MQ=255)                        aTCATAAGGTGAAGGAACGGCGTAGGCGGGAAAGTACAAAATCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCa                                                                                                                                                                             >  1:125432/1‑251 (MQ=255)                           aTAAGGTGAAGGAACGGCGTAGGCGGGAAAGTACAAAATCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGc                                                                                                                                                                          <  1:360717/251‑1 (MQ=255)                                     ggAACGGCGTAGGCGGGAAAGTACAAAATCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCggg                                                                                                                                                                >  1:848675/1‑250 (MQ=255)                                     ggAACGGCGTAGGCGGGAAAGTACAAAATCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGt                                                                                                                                                                >  1:662919/1‑251 (MQ=255)                                           gCGTAGGCGGGAAAGTACAAAATCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATa                                                                                                                                                                                                >  1:645459/1‑213 (MQ=255)                                                ggCGGGAAAGTACAAAATCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGc                                                                                                                                                                          >  1:721439/1‑230 (MQ=255)                                                  cGGGAAAGTACAAAATCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTaca                                                                                                                                                   >  1:201927/1‑251 (MQ=255)                                                         gTACAAAATCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGa                                                                                                                                            >  1:50599/1‑251 (MQ=255)                                                              aaaTCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCa                                                                                                                                                                             <  1:276384/213‑1 (MQ=255)                                                                  cATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTac                                                                                                                                                    >  1:336228/1‑234 (MQ=255)                                                                    tataACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCATTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAAttt                                                                                                                                 >  1:43259/1‑251 (MQ=255)                                                                         ctctTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTc                                                                                                                                                                                                         <  1:508389/174‑1 (MQ=255)                                                                                   gTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCa                                                                                                                  >  1:655250/1‑251 (MQ=255)                                                                                     aCTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATAtt                                                                                                                                                                                                    >  1:91683/1‑167 (MQ=255)                                                                                     aCTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTacac                                                                                                                                                  >  1:415463/1‑217 (MQ=255)                                                                                     aCTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGaa                                                                                                                                    <  1:76078/231‑1 (MQ=255)                                                                                      cTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCAtt                                                                                                                >  1:842539/1‑250 (MQ=255)                                                                                                tttttGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAATATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCATTCGGGAAttttt                                                                                                     >  1:55149/1‑251 (MQ=255)                                                                                                          aGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCa                                                                                                                                                                         >  1:183838/1‑173 (MQ=255)                                                                                                                aaaTTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAAt                                                                                                                                   <  1:474187/206‑1 (MQ=255)                                                                                                                aaaTTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCATTCGGGAATTTTTCTAAAATGGACGCCa                                                                                      >  1:705535/1‑251 (MQ=255)                                                                                                                 aaTTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGCAGATGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAACTTGCCGAGCCGGCAGCATTCGAGAATTCTTCTAAAGTGGACGCCAt                                                                                     >  1:585574/1‑251 (MQ=255)                                                                                                                     tATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTAc                                                                                                                                               >  1:378585/1‑189 (MQ=255)                                                                                                                     tATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAAt                                                                                                                                   <  1:8348/201‑1 (MQ=255)                                                                                                                          gTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCATTCGGGAATTTTTCTAAAATGGACGCCATGGCGTTGga                                                                            >  1:708083/1‑251 (MQ=255)                                                                                                                            ccGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGc                                                                                                                                                                          >  1:110603/1‑155 (MQ=255)                                                                                                                            ccGTTGAAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCATTCGGGAATTTTTCTAAAATGGACGCCATGGCGTTGgaag                                                                          <  1:582164/251‑1 (MQ=255)                                                                                                                               ttGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCATTCGGGAATTTTTCTAAAATGGACGCCATGGCGTTGGAAGaaa                                                                       >  1:740735/1‑251 (MQ=255)                                                                                                                                    gATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGAcc                                                                                                                                          >  1:190305/1‑179 (MQ=255)                                                                                                                                    gATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCATTCGGGAATTTTTCTAAAATGGACGCCAt                                                                                     <  1:612092/232‑1 (MQ=255)                                                                                                                                      ttACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCATTCGGGAATTTTTCTAAAATGGACGCCATGGCGTTGgaag                                                                          <  1:46054/241‑1 (MQ=255)                                                                                                                                           ataatGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCATTCGGGAATTTTTCTAAAATGGACGCCATGGCGTTGGAAGAAATCAGCGAGtttt                                                           >  1:58209/1‑251 (MQ=255)                                                                                                                                                   cTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTAc                                                                                                                                               >  1:534670/1‑159 (MQ=255)                                                                                                                                                     ttttAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCATTCggg                                                                                                            >  1:590240/1‑192 (MQ=255)                                                                                                                                                            aTTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTacac                                                                                                                                                  >  1:294532/1‑147 (MQ=255)                                                                                                                                                            aTTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCATTCGGGAATTTTTCTAAAATGGACGCCATGGCGTTGgaag                                                                          <  1:458119/219‑1 (MQ=255)                                                                                                                                                            aTTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCATTCGGGAATTTTTCTAAAATGGACGCCATGGCGTTGGAAGAAATCAGCGAGTTTTGTCCCACAAAAATCGCa                                          >  1:507999/1‑251 (MQ=255)                                                                                                                                                            aTTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCATTCGGGAATTTTTCTAAAATGGACGCCATGGCGTTGGAAGAAATCAGCGAGTTTTGTCCCACAAAAATCGCa                                          >  1:328278/1‑251 (MQ=255)                                                                                                                                                                             gTTAAAAAATAATAGCAAACCTCCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCAGTGCCGAAACGTACACTACCGACCATAGAATTTGCCg                                                                                                                             <  1:673694/151‑1 (MQ=255)                                                                                                                                                                             gTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGaaa                                                                                                                                                         >  1:368503/1‑123 (MQ=255)                                                                                                                                                                             gTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTAc                                                                                                                                               >  1:547594/1‑133 (MQ=255)                                                                                                                                                                             gTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCATTCGGGAATTTTTCTAAAATGGACGCCATGGCGTTGGAAGAAATCAGCGAGTTTTGTCCCACAAAAATCGCAATGCcaattgcaattg                          >  1:692873/1‑250 (MQ=255)                                                                                                                                                                                    aataatAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCATTCGGGAATTTTTCTAAAATGGACGCCATGGCGTTGGAAGAAATCAGCGAGTTTTGTCCCACAAAAATCGCAATGCCAATTGCAATTGccctgtag                  <  1:30640/251‑6 (MQ=255)                                                                                                                                                                                         taGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGAcc                                                                                                                                          >  1:244868/1‑126 (MQ=255)                                                                                                                                                                                         taGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCATTCGGGAATTTTTCTAAAATGGACGCCATGGCGTTGGAAGAAATCAGCGAGTTTTGTCCCACAAAAATCGCAATGCCAATTGCAATTGccctgtagcggag             <  1:764158/251‑11 (MQ=255)                                                                                                                                                                                         taGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCATTCGGGAATTTTTCTAAAATGGACGCCATGGCGTTGGAAGAAATCAGCGAGTTTTGTCCCACAAAAATCGCAATGCCAATTGCAATTGccctgtagcggag             >  1:205039/1‑241 (MQ=255)                                                                                                                                                                                         taGCAAACCACCGCCATCAACGAACACGCAGCCATGGTCAGCAACAGTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAAAGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCATTCGGGAATTTTTCTAAAATGGACGCCATGGCGTTGGAAGAAATCAGCGAGTTTTGTCCCACAAAAATCGCAATGACAATTGCAATTGccctgtagcggag             <  1:464602/251‑11 (MQ=255)                                                                                                                                                                                                    cGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCATTCGGGAATTTTTCTAAAATGGACGCCATGACGTTGGAAGAAATCAGCGAGTTTTGTCCCACAAAAATCGCAATGCCAATTGCAATTGccctgtagcggagcgagcaatttg  >  1:446493/1‑230 (MQ=255)                                                                                                                                                                                                           aaCGAACACGCCGCCATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCATTCGGGAATTTTTCTAAAATGGACGCCATGGCGTTGGAAGAAATCAGCGAGTTTTGTCCCACAAAAATCGCAATGCCAATTGCAATTGccctgtag                  >  1:861/1‑223 (MQ=255)                                                                                                                                                                                                                       gccATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCATTCGGGAATTTTTCTAAAATGGACGCCATGGCGTTGGAAGAAAt                                                                      <  1:59172/164‑1 (MQ=255)                                                                                                                                                                                                                       gccATGGTCAGCAACATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCATTCGGGAATTTTTCTAAAATGGACGCCATGGCGTTGGAAGAAATCAGCGAGTTTTGTCCCACAAAAATCGCAATGCCAATTGCAATTGccctgtag                  >  1:315677/1‑211 (MQ=255)                                                                                                                                                                                                                            ggTCAGCAACATTGGCGTTGTGCTGCTCATATTCATaa                                                                                                                                                                                               >  1:396161/1‑38 (MQ=255)                                                                                                                                                                                                                                    aCATTGGCGTTGTGCTGCTCATATTCATAAGGGCAACCAGTGATCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCCGGCGGCATTCGGGAATTTTTCTAAAATGGACGCCATGGCGTTGGAAGAAATCAGCGAGTTTTGTCCCACAAAAATCGCAATGCcaattgc                               >  1:509933/1‑190 (MQ=255)                                                                                                                                                                                                                                                |                                                                                                                                                                                                               AACCGATTTTAGCGCGGCATTCTATCATAAGGTGAAGGAACGGCGTAGGCGGGAAAGTACAAAATCATATAACTCTTTCACGGTACTTTGAGATATTTTTGATTTAGAAC‑AAATTTATCTGTCCGTTGCAGATTACAATAATGCGCTTTTTAAAATTATAAATTGCGCGCGGTTAAAAAATAATAGCAAACCACCGCCATCAACGAACACGCCGCCATGGTCAGCAACATTGGCGTTGCGCTGCTCATATTCATAAGGGCAACCAGTG‑TCCCACGCAGGCGCCGGTGCCGAAACGTACACTACCGACCATAGAATTTGCCGAGCAGGCGGCATTCGGGAATTTTTCTAAAATGGACGCCATGGCGTTGGAAGAAATCAGCGAGTTTTGTCCCACAAAAATCGCAATGCCAATTGCAATTGCCCAAAAGCCCAAATTCAGCAACA  >  1/26450‑26893

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑