| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,467,239 | A→C | intergenic (‑22611/‑174525) | unknown ← / → unknown | tRNA‑Met‑CAT/tRNA‑Gly‑GCC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,467,239 | 0 | A | C | 98.7% | 212.0 / ‑4.4 | 78 | intergenic (‑22611/‑174525) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Gly‑GCC |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base C (33/44); total (34/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.36e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.78e-01 | |||||||||||
TCATATCGGTAATCGGTTTTTGAAAATCGCGCGGAAGCTGTTGGACTTCATCCAAAATAATCACGCTGTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACAGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAATAAAGTGCGGTCGGATTCTGCGGCAGAAAAACATTGCGCTAAAATGGCACTCCGCTCTTGATTTAACACTGAATGCTTA > 1/1466998‑1467485 | tcatATCGGTAATCGGTTTTTGAAAATCGCGCGGAAGCTGTTGGACTTCATCCAAAATAATCACGCTGTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCg > 1:737575/1‑251 (MQ=255) ggTAATCGGTTTTTGAAAATCGCGCGGAAGCTGTTGGACTTCATCCAAAATAATCACGCTGTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATg > 1:561534/1‑251 (MQ=255) tAATCGGTTTTTGAAAATCGCGCGGAAGCTGTTGGACTTCATCCAAAATAATCACGCTGTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGc < 1:94836/250‑1 (MQ=255) tAATCGGTTTTTGAAAATCGCGCGGAAGCTGTTGGACTTCATCCAAAATAATCACGCTGTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGc < 1:749597/250‑1 (MQ=255) tAATCGGTTTTTGAAAATCGCGCGGAAGCTGTTGGACTTCATCCAAAATAATCACGCTGTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGc < 1:361087/250‑1 (MQ=255) cGGTTTTTGAAAATCGCGCGGAAGCTGTTGGACTTCATCCAAAATAATCACGCTGTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTAc < 1:741784/251‑1 (MQ=255) tttGAAAATCGCGCGGAAGCTGTTGGACTTCATCCAAAATAATCACGCTGTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACCTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGaaa > 1:223436/1‑251 (MQ=255) cgcgGAAGCTGTTGGACTTCATCCAAAATAATCACGCTGTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGc < 1:328137/230‑1 (MQ=255) cTGTTGGACTTCATCCAAAATAATCACGCTGTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTc < 1:167357/249‑1 (MQ=255) gTTGGACTTCATCCAAAATAATCACGCTGTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGAACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCaata > 1:310287/1‑251 (MQ=255) aTCCAAAATAATCACGCTGTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTaa > 1:566308/1‑251 (MQ=255) aaaaTAATCACGCTGTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCTGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAggg < 1:365642/251‑1 (MQ=255) aaaaTAATCACGCTGTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAggg < 1:558859/251‑1 (MQ=255) aaaaTAATCACGCTGTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAggg < 1:425134/251‑1 (MQ=255) taatCACGCTGTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATg > 1:191686/1‑251 (MQ=255) cTGTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGC‑AGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGAt < 1:63277/250‑1 (MQ=255) gTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGGAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAggg < 1:271071/237‑1 (MQ=255) gTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCaataa > 1:500725/1‑224 (MQ=255) gTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAggg < 1:398158/237‑1 (MQ=255) gTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAggg < 1:810963/237‑1 (MQ=255) gTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAggg > 1:647498/1‑237 (MQ=255) gTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATaa > 1:394121/1‑251 (MQ=255) cTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTaaa < 1:713842/232‑1 (MQ=255) cTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAAt > 1:751720/1‑250 (MQ=255) cTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATc < 1:876038/251‑1 (MQ=255) cAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAg < 1:484693/250‑1 (MQ=255) gTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGt > 1:76938/1‑211 (MQ=255) tCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAg < 1:196132/251‑1 (MQ=255) cTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGc < 1:451283/251‑1 (MQ=255) tCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAggg < 1:228343/182‑1 (MQ=255) tCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCaa < 1:482716/251‑1 (MQ=255) caacTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAgg < 1:785614/176‑1 (MQ=255) caacTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGttt > 1:575444/1‑251 (MQ=255) cacaTTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCaataa < 1:351344/158‑1 (MQ=255) caTTAGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTc > 1:364291/1‑151 (MQ=255) ttGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCcaccac > 1:398211/1‑250 (MQ=255) ttGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCcaccac > 1:873549/1‑250 (MQ=255) tGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACAGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCaataa > 1:602285/1‑153 (MQ=255) ggTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCt > 1:800234/1‑228 (MQ=255) ggTAGTAACAATCAACGGCGCATCCC‑GGTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGc < 1:226900/154‑1 (MQ=255) gtaACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCgg > 1:753707/1‑251 (MQ=255) aaCAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAg > 1:19757/1‑209 (MQ=255) aCAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGcac < 1:513885/251‑1 (MQ=255) aCAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGcac < 1:702318/251‑1 (MQ=255) cAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTc > 1:309238/1‑245 (MQ=255) aTCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGt > 1:482308/1‑251 (MQ=255) cgcATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGaa < 1:121265/250‑1 (MQ=255) cgcATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGaa < 1:254986/250‑1 (MQ=255) cgcATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGaa < 1:440386/250‑1 (MQ=255) cATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAAt > 1:421956/1‑251 (MQ=255) tCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGc < 1:501068/234‑1 (MQ=255) tCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGaa < 1:837352/246‑1 (MQ=255) ccAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAATAAAg < 1:20463/251‑1 (MQ=255) ttCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAATAAAGTGCGGt > 1:79238/1‑251 (MQ=255) caAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAATAAAGTGCGGTCGGATTc < 1:582174/250‑1 (MQ=255) gCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAATAAAGTGCGGTCGGATTCTGCGGCAGAAAAAc < 1:751243/250‑1 (MQ=255) gCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAATAAAGTGCGGTCGGATTCTGCGGCAGAAAAAc < 1:258974/250‑1 (MQ=255) gTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAAc < 1:429142/141‑1 (MQ=255) gTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGcac < 1:790701/203‑1 (MQ=255) gTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGcac < 1:541654/203‑1 (MQ=255) ttCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGc > 1:333152/1‑98 (MQ=255) tCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAATAAAGTGc > 1:321879/1‑211 (MQ=255) cTTCCAAATTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAATAAAGTGCGGTCGGATTCTGCGGCAGAAAAACATTGCGCTAAAATGGCACTCCg > 1:847397/1‑250 (MQ=255) aTTGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAATAAAGTGCGGTCGGATTCTGCGGCAGAAAAACATTGCGCTAAAATGGCACTCCGCTCTTGAt < 1:31754/251‑1 (MQ=255) ttGCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAG‑TAAAGAAAATAAAGTGCGGTCGGATTCTGCGGCAGAAAAACATTGCGCTAAAATGGCACTCCGCCCTTGAttt > 1:415629/1‑251 (MQ=255) gCTGTGATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAATAAAGTGCGGTCGGATTCTGCGGCAGAAAAACATTGCGCTAAAATGGCACTCCGCTCTTGATTTa > 1:590372/1‑251 (MQ=255) gtgATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAATAAAGTGCGGTCGGATTCTGCGGCAGAAAAACATTGCGCTAAAATGGCACTCCGCTCTTGATTTAaca > 1:348878/1‑251 (MQ=255) tgATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAATAAAGTGCGGTCGGATTCTGCGGCAGAAAAACATTGCGCTAAAATGGCACTCCGCTCTTGATTTAacac < 1:257415/251‑1 (MQ=255) tgATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAATAAAGTGCGGTCGGATTCTGCGGCAGAAAAACATTGCGCTAAAATGGCACTCCGCTCTTGATTTAacac < 1:85376/251‑1 (MQ=255) tgATGCTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAATAAAGTGCGGTCGGATTCTGCGGCAGAAAAACATTGCGCTAAAATGGCACTCCGCTCTTGATTTAacac < 1:379978/251‑1 (MQ=255) cTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAg > 1:394809/1‑110 (MQ=255) cTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGc > 1:590936/1‑123 (MQ=255) cTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAATAAAg > 1:514653/1‑182 (MQ=255) cTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAATAAAGTGCGGTCGGATTCTGCGGCAGAAAAACAt > 1:581125/1‑211 (MQ=255) cTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAATAAAGTGCGGTCGGATTCTGCGGCAGAAAAACAt < 1:618510/211‑1 (MQ=255) cTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAATAAAGTGCGGTCGGATTCTGCGGCAGAAAAACATTGCGCTAAAATGGCACTCCGCTCTTGATTTAacac < 1:898697/246‑1 (MQ=255) cTCCAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAATAAAGTGCGGTCGGATTCTGCGGCAGAAAAACATTGCGCTAAAATGGCACTCCGCTCTTGATTTAACACTGAAt > 1:342450/1‑251 (MQ=255) ccAGCACCGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAATAAAGTGCGGTCGGATTCTGCGGCAGAAAAACATTGCGCTAAAATGGCACTCCGCTCTTGATTTAACACTGAATGc < 1:866827/251‑1 (MQ=255) gcaccgcaTCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAATAAAGTGCGGTCGGATTCTGCGGc < 1:376733/196‑1 (MQ=255) gcaccgcaTCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCAGCACAGTTAAAGAAAATAAAGTGCGGTCGGATTCTGCGGCAGAAAAACATTGCGCTAAAATGGCACTCCGCTCTTGATTTAACACTGAATGCTTa > 1:650953/1‑251 (MQ=255) | TCATATCGGTAATCGGTTTTTGAAAATCGCGCGGAAGCTGTTGGACTTCATCCAAAATAATCACGCTGTCTGCGATATTGTGAATCTTGCGGCAGCGGCTGGTTCTTGCCGCAAACAGGCTTTCAAACAACTGCACATTGGTAGTAACAATCAACGGCGCATCCCAGTTTTCCGCAGCAAGGCGCGTTTTGGCAGTTTCCTTGTCTTCCTTGACTTCCAAATTGCTGTGATGCTCCAGCACAGCATCATCGCCCAATGCTTTACGGAAAAAATCGGCGTTTTGTTCAATAATGCTGGTAAAGGGAATGGCGTAGATAATCCGTTTTTTACCGAACTTCAAAGCGTGTTTTAAAGCAAACCCCAAGCTCGCCAAGGTTTTGCCACCACCTGTCGGCACAGTTAAAGAAAATAAAGTGCGGTCGGATTCTGCGGCAGAAAAACATTGCGCTAAAATGGCACTCCGCTCTTGATTTAACACTGAATGCTTA > 1/1466998‑1467485 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |