Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,464,898 A→G intergenic (‑20270/‑176866) unknown ← / → unknown tRNA‑Met‑CAT/tRNA‑Gly‑GCC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,464,8980AG100.0% 201.6 / NA 71intergenic (‑20270/‑176866)unknown/unknowntRNA‑Met‑CAT/tRNA‑Gly‑GCC
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (28/43);  total (28/43)

TTCTAATTCATAACTGAATGTTAGATCCAAAATATTTGATTGTATATATTTTTGTTGAGCCTCAATAACTTGTGCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAACACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTGAGAAATCTAAATCTTGATGTTTAATTTCACCAAAAAAGAATAGAATCGCTGATAATAAATTAGATTTGCCATGATTATTTTGTCCAATAATAATCATCAAGTCTTGTGCTGAAATTCTTAGCTC  >  1/1464669‑1465139
                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                 
ttCTAATTCATAACTGAATGTTAGATCCAAAATATTTGATTGTATATATTTTTGTTGAGCCTCAATAACTTGTGCCTTAGACAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAg                                                                                                                                                                                                                              <  1:450923/251‑1 (MQ=255)
          tAACTGAATGTTAGATCCAAAATATTTGATTGTATATATTTTTGTTGAGCCTCAATAACTTGTGCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCTCCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCtt                                                                                                                                                                                                                    <  1:611421/251‑1 (MQ=255)
                   gTTAGATCCAAAATATTTGATTGTATATATTTTTGTTGAGCCTCAATAACTTGTGCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAgcac                                                                                                                                                                                                                                                <  1:779550/214‑1 (MQ=255)
                    ttAGATCCAAAATATTTGATTGTATATATTTTTGTTGAGCCTCAATAACTTGTGCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGatat                                                                                                                                                                                                          <  1:17047/251‑1 (MQ=255)
                               atatTTGATTGTATATATTTTTGTTGAGCCTCAATAACTTGTGCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAAccc                                                                                                                                                                                                                                    <  1:826427/214‑1 (MQ=255)
                                 atTTGATTGTATATATTTTTGTTGAGCCTCAATAACTTGTGCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAAtgttg                                                                                                                                                                                             >  1:625903/1‑251 (MQ=255)
                                      aTTGTATATATTTTTGTTGAGCCTCAATAACTTGTGCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCt                                                                                                                                                                                                                     >  1:621370/1‑222 (MQ=255)
                                      aTTGTATATATTTTTGTTGAGCCTCAATAACTTGTGCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGttt                                                                                                                                                                                          <  1:555505/249‑1 (MQ=255)
                                       ttGTATATATTTTTGTTGAGCCTCAATAACTTGTGCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAg                                                                                                                                                                                                                              <  1:178070/212‑1 (MQ=255)
                                         gtttaaatTTTTGTTGAGCTTAAATACCTTGTGCTTTAGATAGCTTTCCAGTACTAGGT‑AATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGatat                                                                                                                                                                                                          <  1:114384/223‑1 (MQ=255)
                                         gTATATATTTTTGTTGAGCCTCAATAACTTGTGCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAg                                                                                                                                                                                                                              <  1:407361/210‑1 (MQ=255)
                                         gTATATATTTTTGTTGAGCCTCAATAACTTGTGCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAg                                                                                                                                                                                                                              <  1:856137/210‑1 (MQ=255)
                                         gTATATATTTTTGTTGAGCCTCAATAACTTGTGCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGc                                                                                                                                                                                                                      >  1:291451/1‑218 (MQ=255)
                                         gTATATATTTTTGTTGAGCCTCAATAACTTGTGCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCttag                                                                                                                                                                                                                  <  1:654120/222‑1 (MQ=255)
                                         gTATATATTTTTGTTGAGCCTCAATAACTTGTGCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCtt                                                                                                                                                                                                                    <  1:217875/220‑1 (MQ=255)
                                         gTATATATTTTTGTTGAGCCTCAATAACTTGTGCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGAt                                                                                                                                                                                       >  1:829446/1‑249 (MQ=255)
                                           atatatTTTTGTTGAGCCTCAATAACTTGTGCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAg                                                                                                                                                                                                                              <  1:231184/208‑1 (MQ=255)
                                                            cTCAATAACTTGTGCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAAt                                                                                                                                                                                                                                <  1:111719/189‑1 (MQ=255)
                                                            cTCAATAACTTGTGCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAg                                                                                                                                                                                                                              >  1:225337/1‑191 (MQ=255)
                                                             tCAATAACTTGTGCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTGTCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGatat                                                                                                                                                                                                          <  1:361545/210‑1 (MQ=255)
                                                             tCAATAACTTGTGCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGc                                                                                                                                                                                                                      <  1:93349/198‑1 (MQ=255)
                                                                    cTTGTGCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAat                                                                                                                                                                                <  1:892621/229‑1 (MQ=255)
                                                                       gtgCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGAt                                                                                                                                                                                       >  1:702119/1‑219 (MQ=255)
                                                                                      ttCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAg                                                                                                                                                                                                                              <  1:104820/165‑1 (MQ=255)
                                                                                      ttCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGat                                                                                                                                                                                                            >  1:387420/1‑183 (MQ=255)
                                                                                           gTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCAc                                                                                                                                    >  1:297557/1‑250 (MQ=255)
                                                                                             aCTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAg                                                                                                                                                                                                                              <  1:567126/158‑1 (MQ=255)
                                                                                                aGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAatat                                                                                                                                                         >  1:27918/1‑224 (MQ=255)
                                                                                                aGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTtgtg                                                                                                                              >  1:352761/1‑251 (MQ=255)
                                                                                                 ggTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAgcac                                                                                                                                                                                                                                                <  1:480915/136‑1 (MQ=255)
                                                                                                   tAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTgag                                                                                                                            <  1:272525/250‑1 (MQ=255)
                                                                                                      atatTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTGAGaaat                                                                                                                        >  1:682364/1‑251 (MQ=255)
                                                                                                           gATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTGAGaaatctaaa                                                                                                                   >  1:278284/1‑251 (MQ=255)
                                                                                                             tAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCAc                                                                                                                                    <  1:225152/232‑1 (MQ=255)
                                                                                                             tAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTGAGaaatctaaatc                                                                                                                 <  1:290501/251‑1 (MQ=255)
                                                                                                                   ggCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGatat                                                                                                                                                                                                          <  1:593801/156‑1 (MQ=255)
                                                                                                                         cTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAg                                                                                                                                                                                                                              <  1:565708/130‑1 (MQ=255)
                                                                                                                         cTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTc                                                                                                                                                                                                     >  1:192486/1‑155 (MQ=255)
                                                                                                                         cTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCt                                                                                                                                                                            <  1:630908/180‑1 (MQ=255)
                                                                                                                         cTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTgag                                                                                                                            <  1:184025/228‑1 (MQ=255)
                                                                                                                         cTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTGAGAAATCTAAATCTTGATGTTTAAt                                                                                                     >  1:847455/1‑251 (MQ=255)
                                                                                                                           aTTAGCGATCTCTCGCTTCGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCCCCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAACATATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTGAGAAATCTAAATCTTGATGTTTAAttt                                                                                                   <  1:770476/251‑1 (MQ=255)
                                                                                                                                  aTCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAAccc                                                                                                                                                                                                                                    >  1:542318/1‑115 (MQ=255)
                                                                                                                                            tAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGagt                                                                                                                                                                                >  1:203578/1‑155 (MQ=255)
                                                                                                                                              gTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTc                                                                                                                                                                                                                            <  1:191992/111‑1 (MQ=255)
                                                                                                                                              gTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATc                                                                                                                                                                       <  1:822979/164‑1 (MQ=255)
                                                                                                                                              gTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACaaaa                                                                                                                                                 <  1:15147/186‑1 (MQ=255)
                                                                                                                                              gTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGc                                                                                                                                              <  1:570558/189‑1 (MQ=255)
                                                                                                                                              gTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGc                                                                                                                                      >  1:170343/1‑197 (MQ=255)
                                                                                                                                              gTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCAc                                                                                                                                    <  1:462509/199‑1 (MQ=255)
                                                                                                                                                   aTTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCCCCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTgag                                                                                                                            <  1:744576/202‑1 (MQ=255)
                                                                                                                                                    ttCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAg                                                                                                                                                                                                                              >  1:626040/1‑103 (MQ=255)
                                                                                                                                                           cGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTGAGAAATCTAAATCTTGATGTTTAATTTCACCAAAAAAGAATAGAATCGCTGATAATaaa                                                                   <  1:831956/251‑1 (MQ=255)
                                                                                                                                                                               gcttctGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTGAGAAATCTAAATCTTGATGTTTAATTTCACCAAAAAAGAATAGAATCGCTGATAATAAATTAGATTTGCCATGattatt                                               >  1:8113/2‑251 (MQ=255)
                                                                                                                                                                                cttctGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATc                                                                                                                                                                       >  1:243647/1‑130 (MQ=255)
                                                                                                                                                                                cttctGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCa                                                                                                                                                                   <  1:382817/134‑1 (MQ=255)
                                                                                                                                                                                cttctGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTGAGAAATCTAAATCTTGATGTTTAATTTCACCAAAAAAGAATAGAATCGCTGATAATAAATTAGATTTGCCATGATTAttt                                              <  1:230490/251‑1 (MQ=255)
                                                                                                                                                                                          acTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAAccc                                                                                                                                                                                                                                    >  1:598837/1‑59 (MQ=255)
                                                                                                                                                                                          acTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATc                                                                                                                                                                       >  1:29549/1‑120 (MQ=255)
                                                                                                                                                                                          acTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTGAGAAATCTAAATCTTGATGTTTAATTTCACCAAAAAAGAATAGAATCGCTGATAATAAATTAGATTTGCCATGATTATTTTGTCCaataa                                    <  1:387085/251‑1 (MQ=255)
                                                                                                                                                                                          acTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACCTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTGAGAAATCTAAATCTTGATGTTTAATTTCACCAAAAAAGAATAGAATCGCTGATAATAAATTAGATTTGCCATGATTATTTTGTCCaataa                                    >  1:694533/1‑251 (MQ=255)
                                                                                                                                                                                                 aTCCAACCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTGAGAAATCTAAATCTTGATGTTTAATTTCACCAAAAAAGAATAGAATCGCTGATAATAAATTAGATTTGCCATGatt                                                  >  1:11225/1‑230 (MQ=255)
                                                                                                                                                                                                    cAACCTTTATATTCGAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTGAGAAATCTAAATCTTGATGTTTAATTTCACCAAAAAAGAATAGAATCGCTGATAATAAAtt                                                                 >  1:277201/1‑212 (MQ=255)
                                                                                                                                                                                                      aCCTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTGAGAAATCTAAATCTTGATGTTTAATTTCACCAAAAAAGAATAGAATCGCTGATAATAAATTAGATTTGCCATGATTATTTTGTCCAATAATAATCATCAAGt                        <  1:884401/251‑1 (MQ=255)
                                                                                                                                                                                                       ccTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAAccc                                                                                                                                                                                                                                    <  1:861642/46‑1 (MQ=255)
                                                                                                                                                                                                       ccTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAAcc                                                                                                                                                                                                                                     <  1:423920/45‑1 (MQ=255)
                                                                                                                                                                                                       ccTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTGAGAAATCTAAATCTTGATGTTTAATTTCACCAAAAAAGAATAGAATCGCTGATAATAAATTAGATTTGCCATGATTATTTTGTCCAATAATAATCATCAAGt                        >  1:756957/1‑250 (MQ=255)
                                                                                                                                                                                                       ccTTTATATTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTGAGAAATCTAAATCTTGATGTTTAATTTCACCAAAAAAGAATAGAATCGCTGATAATAAATTAGATTTGCCATGATTATTTTGTCCAATAATAATCATCAAGt                        >  1:501874/1‑250 (MQ=255)
                                                                                                                                                                                                              atTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTGAGAAATCTAAATCTTGATGTTTAATTTCACCAAAAAAGAATAGAATCGCTGATAATAAATTAGATTTGCCATGATTATTTTGTCCAATAATAATCATCAAGTCt                      <  1:665977/245‑1 (MQ=255)
                                                                                                                                                                                                              atTCAAAACTACCACCCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTGAGAAATCTAAATCTTGATGTTTAATTTCACCAAAAAAGAATAGAATCGCTGATAATAAATTAGATTTGCCATGATTATTTTGTCCAATAATAATCATCAAGTCTtgtg                  >  1:704632/1‑249 (MQ=255)
                                                                                                                                                                                                                          caccCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTGAGAAATCTAAATCTTGATGTTTAATTTCACCAAAAAAGAATAGAATCGCTGATAATAAATTAGATTTGCCATGATTATTTTGTCCAATAATAATCATCAAGTCTTGTGCTGAAATTCTTAGc    <  1:46475/251‑1 (MQ=255)
                                                                                                                                                                                                                           accCAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAat                                                                                                                                                                                <  1:468115/78‑1 (MQ=255)
                                                                                                                                                                                                                            cccAAATAAGCACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTGAGAAATCTAAATCTTGATGTTTAATTTCACCAAAAAAGAATAGAATCGCTGATAATAAATTAGATTTGCCATGATTATTTTGTCCAATAATAATCATCAAGTCTTGTGCTGAAATTCTTAGctc  <  1:433687/251‑1 (MQ=255)
                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                 
TTCTAATTCATAACTGAATGTTAGATCCAAAATATTTGATTGTATATATTTTTGTTGAGCCTCAATAACTTGTGCCTTAGATAGCTTTCCAGTACTAGGTAAATATTGATAAAAAGGCAAACTATTAGCGATCTCTCGCTTAGTATAATTCCCAGCGTTTTCTTCTTTTAGGAAGTCTTCTGAACAACTTTGTATCCAACCTTTATATTCAAAACTACCACCCAAATAAACACTTTTCCTAACCCTAATAGTCCCTTGCTTAGTTAGATATTTTTCAAATGTTGTTTGATCTTGAATATCTAAATCAGCAAATTCAATATCAACAAAAAGCTCTTGAGCACCTTGTGAGAAATCTAAATCTTGATGTTTAATTTCACCAAAAAAGAATAGAATCGCTGATAATAAATTAGATTTGCCATGATTATTTTGTCCAATAATAATCATCAAGTCTTGTGCTGAAATTCTTAGCTC  >  1/1464669‑1465139

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑