Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	309,762	T→G	intergenic (‑42402/+34843)	unknown ← / ← unknown	SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	309,762	0	T	G	100.0%	172.1 / NA	62	intergenic (‑42402/+34843)	unknown/unknown	SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base G (29/33);  total (29/33)

ATAAAAAGATAGCCGCACTTTGAAGGAGCCCCCTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCTGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCGGCTGATTAATTTCAGCCACCGTACCGCTAAATCCCGTTGTGTCACACTCGCATTAAAAATCGGATCTTCACCCAATACGCCGCAAGGCAACTCTTTCGGAA  >  1/309516‑310008                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                       aTAAAAAGATAGCCGCACTTTGAAGGAGCCCCCTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTcc                                                                                                                                                                                                                                                    <  1:116607/251‑1 (MQ=255)    aaaaGATAGCCGCACTTTGAAGGAGCCCCCTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGa                                                                                                                                                                                                                                                 <  1:616624/251‑1 (MQ=255)     aaaGATAGCCGCACTTTGAAGGAGCCCCCTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGa                                                                                                                                                                                                                                                 >  1:656147/1‑250 (MQ=255)      aaGATAGCCGCACTTTGAAGGAGCCCCCTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACg                                                                                                                                                                                                                                               <  1:26014/251‑1 (MQ=255)      aaGATAGCCGCACTTTGAAGGAGCCCCCTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACg                                                                                                                                                                                                                                               <  1:625060/251‑1 (MQ=255)      aaGATAGCCGCACTTTGAAGGAGCCCCCTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACg                                                                                                                                                                                                                                               <  1:488373/251‑1 (MQ=255)      aaGATAGCCGCACTTTGAAGGAGCCCCCTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACg                                                                                                                                                                                                                                               <  1:296651/251‑1 (MQ=255)        gATAGCCGCACTTTGAAGGAGCCCCCTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTa                                                                                                                                                                                                                                             >  1:411329/1‑251 (MQ=255)             ccGCACTTTGAAGGAGCCCCCTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTAcc                                                                                                                                                                                                                                        <  1:803977/251‑1 (MQ=255)              cGCACTTTGAAGGAGCCCCCTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCt                                                                                                                                                                                                                                       <  1:737128/251‑1 (MQ=255)              cGCACTTTGAAGGAGCCCCCTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCt                                                                                                                                                                                                                                       <  1:69930/251‑1 (MQ=255)              cGCACTTTGAAGGAGCCCCCTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCt                                                                                                                                                                                                                                       <  1:258448/251‑1 (MQ=255)                cACTTTGAAGGAGCCCCCTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTAt                                                                                                                                                                                                                                     <  1:870598/251‑1 (MQ=255)                  cTTTGAAGGAGCCCCCTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACg                                                                                                                                                                                                                                               >  1:298155/1‑239 (MQ=255)                  cTTTGAAGGAGCCCCCTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTg                                                                                                                                                                                                                                   >  1:359055/1‑251 (MQ=255)                      gAAGGAGCCCCCTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACg                                                                                                                                                                                                                                               <  1:98492/235‑1 (MQ=255)                           aGCCCCCTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAg                                                                                                                                                                                                                           <  1:817794/250‑1 (MQ=255)                           aGCCCCCTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAg                                                                                                                                                                                                                           <  1:830487/250‑1 (MQ=255)                              ccccTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTAcc                                                                                                                                                                                                                                        >  1:267221/1‑234 (MQ=255)                               cccTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACg                                                                                                                                                                                                                                               >  1:156521/1‑226 (MQ=255)                                 cTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCAt                                                                                                                                                                                                                                >  1:369295/1‑239 (MQ=255)                                                          aTGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCt                                                                                                                                                                                                                                       <  1:836685/207‑1 (MQ=255)                                                                           ttAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGCTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTAc                                                                                                                                                                           <  1:841225/250‑1 (MQ=255)                                                                                      tttCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCt                                                                                                                                                                                                                                       >  1:632719/1‑179 (MQ=255)                                                                                                    gCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATgg                                                                                                                                                                 <  1:276843/235‑1 (MQ=255)                                                                                                               aCCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACg                                                                                                                                                                                                                                               >  1:723704/1‑146 (MQ=255)                                                                                                               aCCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATg                                                                                                                                                                              <  1:509310/211‑1 (MQ=255)                                                                                                                      aCGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACg                                                                                                                                                                                                                                               <  1:40344/139‑1 (MQ=255)                                                                                                                      aCGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAAt                                                                                                                                                     <  1:306088/229‑1 (MQ=255)                                                                                                                                gTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACg                                                                                                                                                                                                                                               >  1:607613/1‑129 (MQ=255)                                                                                                                                gTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTc                                                                                                                                                                         >  1:598582/1‑199 (MQ=255)                                                                                                                                       gCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTaaaaa                                                                                                                                                                                                          <  1:228614/159‑1 (MQ=255)                                                                                                                                                gTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATGAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCgg                                                                                                      >  1:557946/1‑250 (MQ=255)                                                                                                                                                    ctATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATgg                                                                                                                                                                 >  1:6160/1‑187 (MQ=255)                                                                                                                                                    ctATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCGGCTGAt                                                                                                 >  1:505481/1‑251 (MQ=255)                                                                                                                                                           tgttgtTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCGGCTGATTAATTTc                                                                                          <  1:882831/251‑1 (MQ=255)                                                                                                                                                                         aaaCGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATg                                                                                                                                                                              >  1:137535/1‑153 (MQ=255)                                                                                                                                                                               agaATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCGGCTGATTAATTTCAGCCACCGTACCGCTAAAt                                                                       <  1:809064/250‑1 (MQ=255)                                                                                                                                                                                   ttCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGtttttt                                                                                                                                     >  1:772718/1‑184 (MQ=255)                                                                                                                                                                                   ttCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCGGCTGATTAATTTCAGCCACCGTACCGCTAAATCCCGt                                                                  >  1:643415/1‑251 (MQ=255)                                                                                                                                                                                               aCTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCGGCTGATTAATTTCAGCCACCGTACCGCTAAATCCCGTTGTGTCACACTc                                                      <  1:646760/251‑1 (MQ=255)                                                                                                                                                                                                cTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCGGCTGATTAATTTCAGCCACCGTACCGCTAAATCCCGTTGTGTCacac                                                        >  1:279009/1‑248 (MQ=255)                                                                                                                                                                                                      aaaCAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTAttgt                                                                                                                    <  1:843759/182‑1 (MQ=255)                                                                                                                                                                                                      aaaCAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTAttgt                                                                                                                    <  1:191647/182‑1 (MQ=255)                                                                                                                                                                                                           acGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCGGCTGATTAATTTCAGCCACCGTACCGCTa                                                                          >  1:726935/1‑219 (MQ=255)                                                                                                                                                                                                              cTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCGGCTGATTAATTTCAGCCACCGTACCGCTAAATCCCGTTGTGTCACACTCGCATTAAAAATCGGa                                       >  1:687533/1‑251 (MQ=255)                                                                                                                                                                                                                                    cAATAATGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCGGCTGATTAATTTCAGCCACCGTACCGCTAAATCCCGTTGTGTCACACTCGCATTAAAAATCGGATCTTCACCCAATACGCCGCAAg                 >  1:722474/1‑251 (MQ=255)                                                                                                                                                                                                                                      ataatGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATgg                                                                                                                                                                 >  1:811499/1‑105 (MQ=255)                                                                                                                                                                                                                                      ataatGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCGGCTGATTAATTTCAGCCACCGTACCGCTAAATCCCGTTGTGTCACACTCGCATTAAAAATCGGATCTTCACCCAATAcgc                       <  1:852925/243‑1 (MQ=255)                                                                                                                                                                                                                                      ataatGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCGGCTGATTAATTTCAGCCACCGTACCGCTAAATCCCGTTGTGTCACACTCGCATTAAAAATCGGATCTTCACCCAATACGCCGCAAgg                >  1:183194/1‑250 (MQ=255)                                                                                                                                                                                                                                      ataatGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCGGCTGATTAATTTCAGCCACCGTACCGCTAAATCCCGTTGTGTCACACTCGCATTAAAAATCGGATCTTCACCCAATACGCCGCAAgg                >  1:321555/1‑250 (MQ=255)                                                                                                                                                                                                                                       taatGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCGGCTGATTAATTTCAGCCACCGTACCGCTAAATCCCGTTGTGTcac                                                          >  1:705402/1‑207 (MQ=255)                                                                                                                                                                                                                                         atGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATgg                                                                                                                                                                 >  1:110367/1‑102 (MQ=255)                                                                                                                                                                                                                                         atGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTAttgt                                                                                                                    <  1:3676/147‑1 (MQ=255)                                                                                                                                                                                                                                         atGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTAttg                                                                                                                     <  1:587431/146‑1 (MQ=255)                                                                                                                                                                                                                                         atGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCGGCTGATTAATTTCAGCCACCGTACCGCTAAATCCCGTTGTGTCACACTCGCATTAAAAAt                                           <  1:810954/220‑1 (MQ=255)                                                                                                                                                                                                                                         atGTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCGGCTGATTAATTTCAGCCACCGTACCGCTAAATCCCGTTGTGTCACACTCGCATTAAAAATCGGATCTTCACCCAATACGCCGCAAGGCaa             >  1:476046/1‑250 (MQ=255)                                                                                                                                                                                                                                           gTACCATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCGGCTGATTAATTTCAGCCACCGTACCGCTAAATCCCGTTGTGTCACACTCGCATTAAAAATCGGATCTTCACCCAATAc                         <  1:604363/236‑1 (MQ=255)                                                                                                                                                                                                                                              ccATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCGGCTGATTAATTTCAGCCACCGTACCGCTAAATCCCGTTGTGTCACACTCGCATTAAAAATCGGATCTTCACCCAATAc                         <  1:64899/233‑1 (MQ=255)                                                                                                                                                                                                                                              ccATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCGGCTGATTAATTTCAGCCACCGTACCGCTAAATCCCGTTGTGTCACACTCGCATTAAAAATCGGATCTTCACCCAATACGCCGCAAGGCAActc          <  1:550534/248‑1 (MQ=255)                                                                                                                                                                                                                                              ccATAGCGCGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGAAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCGGCTGATTAATTTCAGCCACCGTACCGCTAAATCCCGTTGTGTCACACCCGCATTAAAAATCGGATCTTCACCCAATACGCCGCAAGGCAACTCttt       >  1:479628/1‑251 (MQ=255)                                                                                                                                                                                                                                                   gcgcGGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCGGCTGATTAATTTCAGCCACCGTACCGCTAAATCCCGTTGTGTCACACTCGCATTAAAAATCGGATCTTCACCCAATACGCCGCAAGGCAACTCTTTCGGaa  >  1:513451/1‑251 (MQ=255)                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                       ATAAAAAGATAGCCGCACTTTGAAGGAGCCCCCTCAAAGTGCGGTCGTTTTTTTACGATGAATTTCAGCCTCGGTTAGAAGCAGATTTCGATAGAAGCGGCAGAGTTGCGACCCGGGACGTAGAAGCGTTCAACGCCTAATCCGTCTCTATCAATGTTGTTTTCAGCAAAACGGAGAATTCCAAATGTCAACTGCTAAAACAACGCTCATAAGGTCAACCACACGAACAATAATGTACCATAGCGCTGTCCAGACGTATTACCTATTGCATAAAAGGTTAATTTCTCTAAAAAAACATAAATTTTGGGGACAAAACAAATGTACTCATTTATGGTAAATTGAAAATGAACACAGTGTTTTTTAACAAATTACTTATTGTTGTCTAAAATCCGGCTGATTAATTTCAGCCACCGTACCGCTAAATCCCGTTGTGTCACACTCGCATTAAAAATCGGATCTTCACCCAATACGCCGCAAGGCAACTCTTTCGGAA  >  1/309516‑310008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑