Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,429,144 T→C intergenic (‑8131/+15102) unknown ← / ← unknown tRNA‑Met‑CAT/tRNA‑Gln‑TTG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,429,1440TC100.0% 187.6 / NA 65intergenic (‑8131/+15102)unknown/unknowntRNA‑Met‑CAT/tRNA‑Gln‑TTG
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (28/37);  total (28/37)

GTCTTCTTACTCAATGAAATGCTCGCACAAGGTGTGCGAAAAGCTGAAATGGCGCGCCGTCTTGATGTTCACATGCCGCAAGTCGATCGCTTATTAGATTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCTTGATAGTCAATTGAGATTGTCAGCTTGCGCGAATCGGGTTCAAAATCCGCCTGATAATCGGTAATTTTTGACACTCCTTCCGTTCCCAGTACATGCCGCTTTATTTTAATTTCCCAATCCGCCAGATTCACACCGCGCCCCATTTGTTCAAGCCACGGCAAGCCATGTTCCAGATCTAGAAACCAGTCATTGGCAAACGACCAAAGGCGGGTTTGTACATTCTGTGCGATAGCTTCAGATT  >  1/1428897‑1429385
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                 
gTCTTCTTACTCAATGAAATGCTCGCACAAGGTGTGCGAAAAGCTGAAATGGCGCGCCGTCTTGATGTTCACATGCCGCAAGTCGATCGCTTATTAGATTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGa                                                                                                                                                                                                                                                >  1:512745/1‑251 (MQ=255)
 tcttctTACTCAATGAAATGCTCGCACAAGGTGTGCGAAAAGCTGAAATGGCGCGCCGTCTTGATGTTCACATGCCGCAAGTCGATCGCTTATTAGATTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGa                                                                                                                                                                                                                                                <  1:518839/250‑1 (MQ=255)
       tACTCAATGAAATGCTCGCACAAGGTGTGCGAAAAGCTGAAATGGCGCGCCGTCTTGATGTTCACATGCCGCAAGTCGATCGCTTATTAGATTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCaa                                                                                                                                                                                                                                         <  1:198556/251‑1 (MQ=255)
            aaTGAAATGCTCGCACAAGGTGTGCGAAAAGCTGAAATGGCGCGCCGTCTTGATGTTCACATGCCGCAAGTCGATCGCTTATTAGATTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAAtggat                                                                                                                                                                                                                                    <  1:803774/251‑5 (MQ=255)
                    gCTCGCACAAGGTGTGCGAAAAGCTGAAATGGCGCGCCGTCTTGATGTTCACATGCCGCAAGTCGATCGCTTATTAGATTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAg                                                                                                                                                                                                                            >  1:454841/1‑251 (MQ=255)
                         cacaAGGTGTGCGAAAAGCTGAAATGGCGCGCCGTCTTGATGTTCACATGCCGCAAGTCGATCGCTTATTAGATTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTg                                                                                                                                                                                                                        >  1:811126/1‑250 (MQ=255)
                               gtgtGCGAAAAGCTGAAATGGCGCGCCGTCTTGATGTTCACATGCCGCAAGTCGATCGCTTATTAGATTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAAt                                                                                                                                                                                                                 >  1:886721/1‑251 (MQ=255)
                               gtgtGCGAAAAGCTGAAATGGCGCGCCGTCTTGATGTTCACATGCCGCAAGTCGATCGCTTATTAGATTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAAt                                                                                                                                                                                                                 >  1:720862/1‑251 (MQ=255)
                                tgtgCGAAAAGCTGAAATGGCGCGCCGTCTTTATGTTCACATGCCGCAAGTCGATCGCTTATTAGATTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATc                                                                                                                                                                                                                <  1:375028/251‑1 (MQ=255)
                                          gCTGAAATGGCGCGCCGTCTTGATGTTCACATGCCGCAAGTCGATCGCTTATTAGATTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCaaaa                                                                                                                                                                                                      >  1:651485/1‑251 (MQ=255)
                                           cTGAAATGGCGCGCCGTCTTGATGTTCACATGCCGCAAGTCGATCGCTTATTAGATTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAAt                                                                                                                                                                                                     <  1:191091/251‑1 (MQ=255)
                                                      cgcCGTCTTGATGTTCACATGCCGCAAGTCGATCGCTTATTAGATTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATag                                                                                                                                                                                          <  1:337650/251‑2 (MQ=255)
                                                      cgcCGTCTTGATGTTCACATGCCGCAAGTCGATCGCTTATTAGATTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATag                                                                                                                                                                                          <  1:577265/251‑2 (MQ=255)
                                                          gTCTTGATGTTCACATGCCGCAAGTCGATCGCTTATTAGATTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCTTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATagtc                                                                                                                                                                                        <  1:451873/249‑4 (MQ=255)
                                                              tGATGTTCACATGCCGCAAGTCGATCGCTTATTAGATTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGtgat                                                                                                                                                                                  <  1:134219/251‑4 (MQ=255)
                                                               gATGTTCACATGCCGCAAGTCGATCGCTTATTAGATTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATag                                                                                                                                                                                          >  1:827053/1‑241 (MQ=255)
                                                                                         cTTATTAGATTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTcagtctccaacac                                                                                                                                                       <  1:745130/251‑13 (MQ=255)
                                                                                         cTTATTAGATTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTcagtctccaacac                                                                                                                                                       <  1:207534/251‑13 (MQ=255)
                                                                                         cTTATTAGATTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTcagtctccaacac                                                                                                                                                       <  1:699008/251‑13 (MQ=255)
                                                                                            attaGATTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTcagtctccaacacatg                                                                                                                                                    <  1:550749/251‑16 (MQ=255)
                                                                                                 aTTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTcagtctccaac                                                                                                                                                         <  1:524064/241‑11 (MQ=255)
                                                                                                     tCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTcagtctccaacac                                                                                                                                                       >  1:857766/1‑227 (MQ=255)
                                                                                                           cccATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTcagtctccaacac                                                                                                                                                       >  1:864945/1‑221 (MQ=255)
                                                                                                              aTCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAAtggat                                                                                                                                                                                                                                    >  1:817800/1‑149 (MQ=255)
                                                                                                              aTCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTcagtc                                                                                                                                                               <  1:302231/222‑5 (MQ=255)
                                                                                                                              gttgAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAAtgg                                                                                                                                                                                                                                      <  1:40454/135‑3 (MQ=255)
                                                                                                                              gttgAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGAttg                                                                                                                  >  1:236200/1‑250 (MQ=255)
                                                                                                                                               aaaaTTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTg                                                                                                 <  1:543249/251‑1 (MQ=255)
                                                                                                                                                 aaTTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTgct                                                                                               <  1:59655/251‑3 (MQ=255)
                                                                                                                                                  aTTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTgctc                                                                                              <  1:177733/251‑4 (MQ=255)
                                                                                                                                                        gcgcGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGcc                                                                                         <  1:659441/250‑1 (MQ=255)
                                                                                                                                                             aaaTTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGc                                                                                    <  1:391621/250‑1 (MQ=255)
                                                                                                                                                             aaaTTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCa                                                                                   >  1:453999/1‑251 (MQ=255)
                                                                                                                                                             aaaTTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCa                                                                                   >  1:711722/1‑251 (MQ=255)
                                                                                                                                                                       aTCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTc                                                                         <  1:500570/251‑1 (MQ=255)
                                                                                                                                                                             tCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTctaaatc                                                                   <  1:106774/251‑7 (MQ=255)
                                                                                                                                                                                   aaaaaTGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGaaa                                                             <  1:693062/251‑1 (MQ=255)
                                                                                                                                                                                               gATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTgg                                                  >  1:568297/1‑250 (MQ=255)
                                                                                                                                                                                                aTTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTGGc                                                 <  1:191585/250‑1 (MQ=255)
                                                                                                                                                                                                           cTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTGGCAAACGACCAAAg                                     >  1:746853/1‑251 (MQ=255)
                                                                                                                                                                                                           cTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTGGCAAACGACCAAAg                                     >  1:677169/1‑251 (MQ=255)
                                                                                                                                                                                                                 gCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGcc                                                                                         <  1:692418/193‑1 (MQ=255)
                                                                                                                                                                                                                 gCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTGGCAAACGACCAAAGGCGGGt                               >  1:537712/1‑251 (MQ=255)
                                                                                                                                                                                                                 gCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTGGCAAACGACCAAAGGCGGGt                               >  1:872055/1‑251 (MQ=255)
                                                                                                                                                                                                                    gTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCaaaa                                                                                                                                                                                                      >  1:45263/1‑81 (MQ=255)
                                                                                                                                                                                                                    gTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTc                                                                                                                                                                       >  1:333726/1‑112 (MQ=255)
                                                                                                                                                                                                                    gTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTcagtctccaac                                                                                                                                                         <  1:857539/126‑11 (MQ=255)
                                                                                                                                                                                                                    gTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGcc                                                                                         >  1:129661/1‑190 (MQ=255)
                                                                                                                                                                                                                    gTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTGGCAAACGACCAAAGGc                                   >  1:397764/1‑244 (MQ=255)
                                                                                                                                                                                                                    gTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTGGCAAACGACCAAAGGCGGGTTTg                            >  1:422224/1‑251 (MQ=255)
                                                                                                                                                                                                                       taGCGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTGGCAAACGACCAAAGGCGGGTTTGTAc                         <  1:838375/251‑1 (MQ=255)
                                                                                                                                                                                                                          cGTGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCTTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTGGCAAACGACCAAAGGCGGGTTTGTACAt                       <  1:423446/250‑1 (MQ=255)
                                                                                                                                                                                                                            tGCGGTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTGGCAAACGACCAAAGGCGGGTTTGTACATTc                     <  1:273577/250‑1 (MQ=255)
                                                                                                                                                                                                                                gTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTGGCAAACGACCAAAGGCGGGTTTGTAc                         >  1:825599/1‑242 (MQ=255)
                                                                                                                                                                                                                                gTCTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTGGCAAACGACCAAAGGCGGGTTTGTACATTCtgtg                 >  1:654092/1‑250 (MQ=255)
                                                                                                                                                                                                                                  cTGTTGTTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTGGCAAACGACCAAAGGCGGGTTTGTACATTc                     <  1:95316/244‑1 (MQ=255)
                                                                                                                                                                                                                                   tgttgtTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTGGCAAACGACCAAAGGCGGGTTTGTACATTCTGTGCGAt             <  1:399625/251‑1 (MQ=255)
                                                                                                                                                                                                                                   tgttgtTGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTGGCAAACGACCAAAGGCGGGTTTGTACATTCTGTGCGAt             <  1:184280/251‑1 (MQ=255)
                                                                                                                                                                                                                                    gttgttGCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTGGCAAACGACCAAAGGCGGGTTTGTACATTCTGTGCGATa            >  1:296157/1‑251 (MQ=255)
                                                                                                                                                                                                                                     ttgttgCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTGGCAAACGACCAAAGGCGGGTTTGTACATTCTGTGCGATAg           <  1:342967/251‑1 (MQ=255)
                                                                                                                                                                                                                                     ttgttgCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTGGCAAACGACCAAAGGCGGGTTTGTACATTCTGTGCGATAg           <  1:30810/251‑1 (MQ=255)
                                                                                                                                                                                                                                     ttgttgCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTGGCAAACGACCAAAGGCGGGTTTGTACATTCTGTGCGATAg           <  1:466254/251‑1 (MQ=255)
                                                                                                                                                                                                                                     ttgttgCCCGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGA‑TTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTGGCAAACGACCAAAGGCGGGTTTGTACATTCTGTGCGATAg           <  1:187175/250‑1 (MQ=255)
                                                                                                                                                                                                                                             cGTAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTGGCAAACGACCAAAGGCGGGTTTGTACATTCTGTGCGATAGCTTCAGAt   >  1:242264/1‑251 (MQ=255)
                                                                                                                                                                                                                                               tAAATGTCCTGATAATCAATGGATATTGTCAGTTTGCGCGAATCGGGTTCAAAATCAGCCTGATAGTCGGTGATTTTTGACACTCCTTCAGTCTCCAACACATGACGCTTAATTTTGATTTCCCAATCTGCCAGATTGACACCGCGCCCCATTTGCTCAAGCCATGGCAAGCCATGTTCTAAATCTAGAAACCAGTCATTGGCAAACGACCAAAGGCGGGTTTGTACATTCTGTGCGATAGCTTCAGAtt  >  1:463689/1‑250 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                 
GTCTTCTTACTCAATGAAATGCTCGCACAAGGTGTGCGAAAAGCTGAAATGGCGCGCCGTCTTGATGTTCACATGCCGCAAGTCGATCGCTTATTAGATTTTCGCCACCCATCCAAAATTGATTTTGTTGAAAAAGCCTTTAAAAAATTAGGGCGCGAAATTAATTTATCGGTTCATTAAAAAATGCGGTCGATTTGACCGCACTTTAAGCTGTATAGCGTGCGGTCTGTTGTTGCCCGTAAATGTCTTGATAGTCAATTGAGATTGTCAGCTTGCGCGAATCGGGTTCAAAATCCGCCTGATAATCGGTAATTTTTGACACTCCTTCCGTTCCCAGTACATGCCGCTTTATTTTAATTTCCCAATCCGCCAGATTCACACCGCGCCCCATTTGTTCAAGCCACGGCAAGCCATGTTCCAGATCTAGAAACCAGTCATTGGCAAACGACCAAAGGCGGGTTTGTACATTCTGTGCGATAGCTTCAGATT  >  1/1428897‑1429385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑