| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,428,736 | C→T | intergenic (‑7723/+15510) | unknown ← / ← unknown | tRNA‑Met‑CAT/tRNA‑Gln‑TTG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,428,736 | 0 | C | T | 100.0% | 163.5 / NA | 62 | intergenic (‑7723/+15510) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Gln‑TTG |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (34/28); total (34/28) | |||||||||||
TCATCGCAAGGTAACGTTGAATGAGTGCCAAACTGTCTTTCCCTACCATGGTAGTAAAGAAATCGGTACCGGCTTAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGACATTCCCGAAATGGCAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAGTATATGGTTCCGCTTTCCTTATTGCGTTCACTAAAAGTCTTCTTACTCAATGAAATGCTCGCACAAGGTGTGCGAAAAGCTGAAATGGCGCGCCGTCTTGATGTTCACA > 1/1428494‑1428969 | tCATCGCAAGGTAACGTTGAATGACTGCCAAACTGTCTTTCCCTACCATGGTAGTAAAGAAATCGGTACCGGCTTAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAgtgt < 1:629/249‑1 (MQ=255) tCGCAAGGTAACGTTGAATGACTGCCAAACTGTCTTTCCCTACCATGGTAGTAAAGAAATCGGTACCGGCTTAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTg < 1:521402/251‑1 (MQ=255) aCGTTGAATGACTGCCAAACTGTCTTTCCCTACCATGGTAGTAAAGAAATCGGTACCGGCTTAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGCAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGa > 1:423024/1‑251 (MQ=255) aCGTTGAATGACTGCCAAACTGTCTTTCCCTACCATGGTAGTAAAGAAATCGGCACCGGCTTAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGa > 1:523086/1‑251 (MQ=255) tGAATGACTGCCAAACTGTCTTTCCCTACCATGGTAGTAAAGAAATCGGTACCGGCTTAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAgc < 1:30772/251‑1 (MQ=255) ctGCCAAACTGTCTTTCCCTACCATGGTAGTAAAGAAATCGGTACCGGCTTAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAgg < 1:703086/227‑1 (MQ=255) aCTGTCTTACCATACCATGGTAGTAAAGAAATCGGTACCGGATTAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCGCCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTGCTTGAAGc < 1:561371/251‑1 (MQ=255) cTGTCTTTCCCTACCATGGTAGTAAAGAAATCGGTACCGGCTTAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCg > 1:477110/1‑251 (MQ=255) gTCTTTCCCTACCATGGTAGTAAAGAAATCGGTACCGGCTTAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGga > 1:212146/1‑251 (MQ=255) gTCTTTCCCTACCATGGTAGTAAAGAAATCGGTACCGGCTTAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATACCCGAAATGGTAAgtgt < 1:284718/215‑1 (MQ=255) cccTACCATGGTAGTAAAGAAATCGGTACCGGCTTAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGaa > 1:712291/1‑225 (MQ=255) aCCATGGTAGTAAAGAAATCGGTACCGGCTTAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGat > 1:601015/1‑215 (MQ=255) aCCATGGTAGTAAAGAAATCGGTACCGGCTTAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGc > 1:637412/1‑238 (MQ=255) ccATGGTAGTAAAGAAATCGGTACCGGCTTAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAg > 1:548158/1‑251 (MQ=255) tGGTAGTAAAGAAATCGGTACCGGCTTAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTg < 1:854654/206‑1 (MQ=255) gtagtaAAGAAATCGGTACCGGCTTAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAAc > 1:266613/1‑250 (MQ=255) gtagtaAAGAAATCGGTACCGGCTTAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAAc < 1:736336/250‑1 (MQ=255) gtagtaAAGAAATCGGTACCGGCTTAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAAc > 1:14732/1‑250 (MQ=255) ggTACCGGCTTAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGat < 1:199897/195‑1 (MQ=255) gTACCGGCTTAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGat > 1:152078/1‑194 (MQ=255) tAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTgatgat < 1:640079/251‑1 (MQ=255) aaaaaaGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTcc < 1:291737/251‑1 (MQ=255) aaaaaaGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTcc < 1:261624/251‑1 (MQ=255) acttaaacttaaAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGc < 1:78212/249‑1 (MQ=255) aaacttaaaATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAagcc < 1:301568/251‑1 (MQ=255) acttaaaATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAagccag > 1:203029/1‑251 (MQ=255) cttaaaATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGc < 1:155296/180‑1 (MQ=255) cttaaaATAAGTCTTTCGCCTCTGAAAA‑GGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAagccagc > 1:253186/1‑250 (MQ=255) gTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGa < 1:393093/248‑1 (MQ=255) cTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGc < 1:581274/251‑1 (MQ=255) ccTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGTGGATAAACGCCAAATTCCAATCCCAAGCCACCCAAAAGATGGCCAAtata > 1:715248/1‑251 (MQ=255) ccTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAAtata > 1:746871/1‑251 (MQ=255) ctctGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAAtatac < 1:662233/251‑2 (MQ=255) gAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTc < 1:885474/213‑1 (MQ=255) gATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGTTCCGCTTTCCTTATTGCGTTCa > 1:627571/1‑250 (MQ=255) gagaAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGTTCCGCTTTCCTTATTGCGTTCACTAAAAg < 1:174844/249‑1 (MQ=255) aaaCCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGTTCCGCTTTCCTTATTGCGTTCACTAAAAGtctt > 1:313335/1‑250 (MQ=255) aTGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGt < 1:493451/212‑1 (MQ=255) aTGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGTTCCGCTTTcc > 1:760670/1‑222 (MQ=255) aTGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGTTCCGCTTTCCTTATTGCGTTCACTAAAAGTCTTCTTACt < 1:872266/251‑1 (MQ=255) tGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGTTCCGCTTTCCTTATTGCGTTCACTAAAAGTCTTCTTACTc < 1:511924/251‑1 (MQ=255) tGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGTTCCGCTTTCCTTATTGCGTTCACTAAAAGTCTTCTTACTc < 1:615092/251‑1 (MQ=255) tGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGTTCCGCTTTCCTTATTGCGTTCACTAAAAGTCTTCTTACTc < 1:84541/251‑1 (MQ=255) aCGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAg < 1:594050/191‑1 (MQ=255) aCGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGTTCCGCTTTCCtt < 1:392324/219‑1 (MQ=255) aCCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAAtatac > 1:777079/1‑198 (MQ=255) aCCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGTTCCGCTTTCCTTATTGCGTTCACTAAAAGTCTTCTTACTCAATGAAATg > 1:396053/1‑251 (MQ=255) gTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAgttg > 1:164594/1‑73 (MQ=255) gTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGTTCCGCTTTCCTTATTGCGTTCACTAAAAGTCTTCTTACTCAATGAAATGCTCg > 1:246761/1‑250 (MQ=255) gAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGTTCCGCTTTCCTTATTGCGTTCACTAAAAGTCTTCTTACTCAATGaaa > 1:676605/1‑241 (MQ=255) ccGGATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGTTCCGCTTTCCTTATTGCGTTCACTAAAAGTCTTCTTACTCAATGAAATGCTCGCACAAGGTGTGCg > 1:777076/1‑251 (MQ=255) ggATGATAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGTTCCGCTTTCCTTATTGCGTTCACTAAAAGTCTTCTTACTCAATGAAATGCTCGCACAAGGTGTGCGaa > 1:298645/1‑251 (MQ=255) gatgatAACGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGTTCCGCTTTCCTTATTGCGTTCACTAAAAGtcttc > 1:804038/1‑216 (MQ=255) cGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGTTCCGCTTTCCTTATTGCGTTCACTAAAAGTCTTCTTACTCAATGAAATGCTCGCACAAGGTGTGCGaa > 1:199088/1‑242 (MQ=255) cGGTACATTCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGTTCCGCTTTCCTTATTGCGTTCACTAAAAGTCTTCTTACTCAATGAAATGCTCGCACAAGGTGTGCGAAAAGCTGaaa > 1:598579/1‑251 (MQ=255) ttCCTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGTTCCGCTTTCCTTATTGCGTTCACTAAAAGTCTTCTTACTCAATGAAATGCTCGCACAAGGTGTGCGAAAAGCTGAAATGgcgcg > 1:392859/1‑251 (MQ=255) ccTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGc > 1:893719/1‑72 (MQ=255) ccTTGTCACTTGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGTTCCGCTTTCCTTATTGCGTTCACTAAAAGTCTTCTTACTCAATGAAATGCTCGCACAAgg > 1:614403/1‑225 (MQ=255) tGCCCCGATATTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGt > 1:364938/1‑155 (MQ=255) cgataTTCCCGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGTTCCGCTTTCCTTATTGCGTTCACTAAAAGTCTTCTTACTCAATGAAATGCTCGCACAAGGTGTGCGAAAAGCTGAAATGGCGCGCCGTCTTGATGTTcaca < 1:320440/247‑1 (MQ=255) cccGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGTTCCGCTTTCCTTATTGCGTTCACTAAAAGtc > 1:323530/1‑174 (MQ=255) cccGAAATGGTAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAATATACGGTTCCGCTTTCCTTATTGCGTTCACTAAAAGTCTTCTTACTCAATGAAATGc > 1:771244/1‑193 (MQ=255) | TCATCGCAAGGTAACGTTGAATGAGTGCCAAACTGTCTTTCCCTACCATGGTAGTAAAGAAATCGGTACCGGCTTAGTTCACAAAATCAAAAAAGACTTAAACTTAAAATAAGTCTTTCGCCTCTGAAAAGGGGCGTTTTCTCAAACGATTTAAGGAGAAACCATGTTACGCTACCCTGTTGAAATCACCCCGGATGATAACGGTACATTCCTTGTCACTTGCCCCGACATTCCCGAAATGGCAAGTGTAGGTGAAGATATTGAAAGCGCACTACTTGAAGCGGAAGAAGGTTTAGAAACCGCCCTTGAATTTTATTTTGATGATAAACGCCCAATTCCAATGCCAAGCCAGCCAAAAGATGGGCAGTATATGGTTCCGCTTTCCTTATTGCGTTCACTAAAAGTCTTCTTACTCAATGAAATGCTCGCACAAGGTGTGCGAAAAGCTGAAATGGCGCGCCGTCTTGATGTTCACA > 1/1428494‑1428969 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |