| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,423,934 | C→A | intergenic (‑2921/+20312) | unknown ← / ← unknown | tRNA‑Met‑CAT/tRNA‑Gln‑TTG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,423,934 | 0 | C | A | 100.0% | 172.9 / NA | 64 | intergenic (‑2921/+20312) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Gln‑TTG |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (28/36); total (28/36) | |||||||||||
CGGCTTAACGGAAACCTCTGATCACCGCGAGTTCGGTTATGCCTCCGTTTTAATAGAAAATCCGACCGCACTTTTTGCCCATTTAAATGACGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACCCTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCACATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTGTTATTACATCGCGCTATCGGCAAAAACTTACATTGCGTGTTCGTGGATAACGG > 1/1423696‑1424178 | cggcTTAACGGAACCCTCTGATCCCCGCGAGTTCGGTTATGCCTCCGTTTTAATAGAAAATCCGACCGCACTTTTTGCCCATTTAAATGACGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAAcc < 1:183241/250‑1 (MQ=255)cggcTTAACGGAAACCTCTGATCACCGCGAGTTCGGTTATGCCTCCGTTTTAATAGAAAATCCGACCGCACTTTTTGCCCATTTAAATGACGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAAcc < 1:43397/250‑1 (MQ=255) tAACGGAAACATCTGATCACCGCGAGTTCGGTTATGCCTCCGTTTTAATAGAAAATCCGACCGCACTTTTTGCCCATTTAAATGACGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACAcc < 1:836612/251‑1 (MQ=255) cGGAAACCTCTGATCACCGCGAGTTCGGTTATGCCTCCGTTTTAATAGAAAATCCGACCGCACTTTTTGCCCATTTAAATGACGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCaaa > 1:723104/1‑251 (MQ=255) aaCCTCTGATCACCGCGAGTTCGGTTATGCCTCCGTTTTAATAGAAAATCCGACCGCACTTTTTGCCCATTTAAATGACGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAg > 1:626197/1‑251 (MQ=255) cccTCTGATCACCGCGATTTCGGTTATGCCTCCGTTTTAATAGAAAATCCGACCGCACTTTTTGCCCATTTAAATGACGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGGGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAgg < 1:556578/250‑1 (MQ=255) ccTCTGATCACCGCGAGTTCGGTTATGCCTCCGTTTTAATAGAAAATCCGACCGCACTTTTTGCCCATTTAAATGACGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAg > 1:776421/1‑231 (MQ=255) ccTCTGATCACCGCGAGTTCGGTTATGCCTCCGTTTTAATAGAAAATCCGACCGCACTTTTTGCCCATTTAAATGACGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAAccc > 1:11308/1‑237 (MQ=255) ccTCTGATCACCGCGAGTTCGGTTATGCCTCCGTTTTAATAGAAAATCCGACCGCACTTTTTGCCCATTTAAATGACGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGc < 1:371714/251‑1 (MQ=255) ccGCGAGTTCGGTTATGCCTCCGTTTTAATAGAAAATCCGACCGCACTTTTTGCCCATTTAAATGACGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGaa < 1:216018/247‑1 (MQ=255) cgAGTTCGGTTATGCCTCCGTTTTAATAGAAAATCCGACCGCACTTTTTGCCCATTTAAATGACGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAAttatta < 1:586957/250‑1 (MQ=255) ttCGGTTATGCCTCCGTTTTAATAGAAAATCCGACCGCACTTTTTGCCCATTTAAATGACGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAAcc < 1:291204/249‑1 (MQ=255) ttCGGTTATGCCTCCGTTTTAATAGAAAATCCGACCGCACTTTTGGCCCATTTAAATGACGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAAcc < 1:266514/249‑1 (MQ=255) ggTTATGCCTCCGTTTTAATAGAAAATCCGACCGCACTTTTTGCCCATTTAAATGACGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAg < 1:812825/211‑1 (MQ=255) tgcatCCGTTTTAATAGAAAATCCGCCGGCACTTTTTGCCCTTTTAAATGAGGGCAACAGAAAATTAGATGTGTGGAGGGCCCCCGGAAATAAGGTAACCCGCCTGCCGAAGGACTTCCAAATCGCCGGCACCACGCCGCCCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCgtag < 1:561947/247‑1 (MQ=255) aTCCGACCGCACTTTTTGCCCATTTAAATGACGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGaa > 1:99510/1‑251 (MQ=255) aTTTAAATGACGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGaaaa > 1:688759/1‑250 (MQ=255) aTTTAAATGACGGCGACAGCAAATTAGATGTGTGGACGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGCCGTTTCTACGGCGTGCAATTCCACACTGAAGCAAcc > 1:364332/1‑170 (MQ=255) aaaaTGACGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGCGATAAAGTTCCCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAAcatc < 1:7607/250‑1 (MQ=255) aCGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCAGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGa < 1:836052/250‑1 (MQ=255) cGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAg < 1:685194/251‑1 (MQ=255) cGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAg < 1:706301/251‑1 (MQ=255) cGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAg < 1:173880/251‑1 (MQ=255) aaTTAGATGTGTGGATGAGCCACGGCGATAAAGTTCCCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCgtag < 1:228081/189‑1 (MQ=255) ttAGATGTGTGGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGgcgcg > 1:576735/1‑250 (MQ=255) gtgtgGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAAc > 1:847943/1‑222 (MQ=255) gtgtgGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTaa > 1:688875/1‑251 (MQ=255) tgtgGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTaa < 1:814293/250‑1 (MQ=255) gCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAAcc > 1:453522/1‑161 (MQ=255) ccACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCGCCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTa < 1:880851/250‑1 (MQ=255) tGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGc < 1:83888/251‑1 (MQ=255) tGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGc < 1:182173/251‑1 (MQ=255) gCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAAccc > 1:351100/1‑107 (MQ=255) tCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAAc < 1:613204/170‑1 (MQ=255) acACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGAt > 1:308434/2‑251 (MQ=255) gCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCcac > 1:596461/1‑86 (MQ=255) gCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGAttcttc > 1:268698/1‑250 (MQ=255) gCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGAc > 1:334672/1‑139 (MQ=255) cGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTGttatta < 1:682178/251‑1 (MQ=255) aTTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTGTTATTAc < 1:41830/250‑1 (MQ=255) aTTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTGTTATTAc < 1:621315/250‑1 (MQ=255) ttGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTGTTATTACAt < 1:347046/251‑1 (MQ=255) ttGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTGTTATTACAt < 1:435009/251‑1 (MQ=255) ttGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTGTTATTACAt < 1:593464/251‑1 (MQ=255) ttGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTGTTATTACAt < 1:265469/251‑1 (MQ=255) gccATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTGTTATTACAt < 1:623826/246‑1 (MQ=255) gTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAgg > 1:740402/1‑195 (MQ=255) gTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTGTTATTACATCGCGCTATCg > 1:206468/1‑251 (MQ=255) tttCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCaaaaa > 1:375464/1‑45 (MQ=255) tttCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGtgat > 1:691940/1‑160 (MQ=255) tttCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGCTTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTGTTATTACATCGCGCTATCGGCAAAAACTTACATTGCg > 1:443256/1‑251 (MQ=255) tttCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTg < 1:698819/214‑1 (MQ=255) tttCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTGTTATTACa > 1:280911/1‑222 (MQ=255) tttCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTGTTATTACAt > 1:164289/1‑223 (MQ=255) tttCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTGTTATTACAt < 1:10968/223‑1 (MQ=255) tttCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTGTTATTACATCGCGCTATCGGCAAAAACTTACAt > 1:41123/1‑247 (MQ=255) tttCTACGGCGTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTGTTATTACATCGCGCTATCGGCAAAAACTTACATTg > 1:511496/1‑249 (MQ=255) gTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCTGTGGTGGCGCTGTTATTACAt > 1:232687/1‑213 (MQ=255) gTGCAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTGTTATTACATCGCGCTATCGGCAAAAACTTACATTGCGTGTTCGTGGa > 1:182844/1‑251 (MQ=255) cAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTGTTATTACAt > 1:311158/1‑210 (MQ=255) cAATTCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTGTTATTACATCGCGCTATCGGCAAAAACTTACATTGCGTGTTCGTGGATac < 1:571874/251‑2 (MQ=255) ttCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAg < 1:621839/151‑1 (MQ=255) ttCCACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTGTTATTACATCGCGCTATCGGCAAAAACTTACATTGCGTGTTCGTGGATAACgg < 1:278191/251‑1 (MQ=255) ccACACTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCGCATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTGTTATTACATCGCGCTATCGGCAAAAACTTACAt < 1:722906/229‑1 (MQ=255) | CGGCTTAACGGAAACCTCTGATCACCGCGAGTTCGGTTATGCCTCCGTTTTAATAGAAAATCCGACCGCACTTTTTGCCCATTTAAATGACGGCGACAGCAAATTAGATGTGTGGATGAGCCACGGCGATAAAGTTACCCGCCTGCCGAAGGACTTCCAAATCACCGGCACCACGCCGACCTGCCCGATTGCCGCCATGTCTGATGAAAATCGTCGTTTCTACGGCGTGCAATTCCACCCTGAAGTAACCCACACCAAAAAAGGCTTGGAATTATTAACCAATTTCGTAGTAAACATTTGCGGTTGCGAAACCAAATGGACGGCAGAAAACATCATTGAAGATGCCGTGGCGCACATTAAAGCGCAAGTAGGTGATGACGAAGTGATTTTAGGCTTATCCGGCGGCGTGGATTCTTCCGTGGTGGCGCTGTTATTACATCGCGCTATCGGCAAAAACTTACATTGCGTGTTCGTGGATAACGG > 1/1423696‑1424178 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |