Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,418,445 C→T intergenic (+258865/+2492) unknown → / ← unknown tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,418,4450CT100.0% 167.1 / NA 63intergenic (+258865/+2492)unknown/unknowntRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (34/29);  total (34/29)

GCTTTGGTCACTTTATTTTTGCCGCGACCACGACCTTCATTGCGGCGCTCTTCTTCATCTTCCGCTTCCAGGGCATAACTGGAGGTTAAATTGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGCTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGCTCGGCTTCTTGTCTGGCTTTCAATTTTGCCGCTTCTTCGGCTTTTTGTGCGGCTTCTGTCGGAATAGTGCGCTTTTTACGCACTTCCACCTG  >  1/1418201‑1418688
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                   
gCTTTGGTCACTTTATTTTTGCCGCGACCACGACCTTCATTGCGGCGCTCTTCTTCATCTTCCGCTTCCAGGGCATAACTGGAGGTTAAATTGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCg                                                                                                                                                                                                                                               >  1:767466/1‑251 (MQ=255)
 cTTTGGTCACTTTATTTTTGCCGCGACCACGACCTTCATTGCGGCGCTCTTCTTCATCTTCCGCTTCCAGGGCATAACTGGAGGTTAAATTGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGt                                                                                                                                                                                                                                              >  1:154556/1‑251 (MQ=255)
     ggTCACTTTATTTTTGCCGCGACCACGACCTTCATTGCGGCGCTCTTCTTCATCTTCCGCTTCCAGGGCATAACTGGAGGTTAAATTGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGttt                                                                                                                                                                                                                                            >  1:142656/1‑249 (MQ=255)
              aTTTTTGCCGCGACCACGACCTTCATTGCGGCGCTCTTCTTCATCTTCCGCTTCCAGGGCATAACTGGAGGTTAAATTGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCg                                                                                                                                                                                                                                 >  1:98452/1‑251 (MQ=255)
                        cgACCACGACCTTCATTGCGGCGCTCTTCTTCATCTTCCGCTTCCAGGGCATAACTGGAGGTTAAATTGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAg                                                                                                                                                                                                                        <  1:615989/250‑1 (MQ=255)
                          aCCACGACCTTCATTGCGGCGCTCTTCTTCATCTTCCGCTTCCAGGGCATAACTGGAGGTTAAATTGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGAtt                                                                                                                                                                                                                     >  1:868505/1‑251 (MQ=255)
                                aCCTTCATTGCGGCGCTCTTCTTCATCTTCCGCTTCCAGGGCATAACTGGAGGTTAAATTGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACt                                                                                                                                                                                                                <  1:504722/250‑1 (MQ=255)
                                     cATTGCGGCGCTCTTCTTCATCTTCCGCTTCCAGGGCATAACTGGAGGTTAAATTGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGatta                                                                                                                                                                                                          >  1:22469/1‑251 (MQ=255)
                                          cggcgCTCTTCTTCATCTTCCGCTTCCAGGGCATAACTGGAGGTTAAATTGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGAc                                                                                                                                                                                                     <  1:768998/251‑1 (MQ=255)
                                               ctctTCTTCATCTTCCGCTTCCAGGGCATAACTGGAGGTTAAATTGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCa                                                                                                                                                                                                 >  1:239011/1‑250 (MQ=255)
                                               ctctTCTTCATCTTCCGCTTCCAGGGCATAACTGGAGGTTAAATTGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCAc                                                                                                                                                                                                <  1:898584/251‑1 (MQ=255)
                                                           ttCCGCTTCCAGGGCATAACTGGAGGTTAAATTGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAg                                                                                                                                                                                    <  1:708524/251‑1 (MQ=255)
                                                           ttCCGCTTCCAGGGCATAACTGGAGGTTAAATTGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAg                                                                                                                                                                                    <  1:865224/251‑1 (MQ=255)
                                                            tCCGCTTCCAGGGCATAACTGGAGGTTAAATTGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACt                                                                                                                                                                                                                >  1:144770/1‑222 (MQ=255)
                                                                 ttCCAGGGCATAACTGGAGGTTAAATTGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGgcc                                                                                                                                                                               >  1:420503/1‑250 (MQ=255)
                                                                  tCCAGGGCATAACTGGAGGTTAAATTGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGAc                                                                                                                                                                                                     <  1:74551/227‑1 (MQ=255)
                                                                      gggCATAACTGGAGGTTAAATTGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTc                                                                                                                                                                                                                                   >  1:30874/1‑193 (MQ=255)
                                                                       ggCATAACTGGAGGTTAAATTGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCCCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGgcctgtgcc                                                                                                                                                                         <  1:693482/250‑1 (MQ=255)
                                                                        gCATAACTGGAGGTTAAATTGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACt                                                                                                                                                                                                                <  1:681308/210‑1 (MQ=255)
                                                                                         aTTGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCgg                                                                                                                                                      >  1:766189/1‑251 (MQ=255)
                                                                                          ttGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTCCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAAc                                                                                                                                                                                                                 <  1:596674/191‑1 (MQ=255)
                                                                                                   gAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGcc                                                                                                                                                                                        >  1:306572/1‑207 (MQ=255)
                                                                                                   gAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCttcttttt                                                                                                                                             >  1:66980/1‑250 (MQ=255)
                                                                                                      tAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCttctttttctt                                                                                                                                          <  1:305698/250‑1 (MQ=255)
                                                                                                          cTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGAc                                                                                                                                                                                                     <  1:41484/187‑1 (MQ=255)
                                                                                                             ccGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCtt                                                                                                                                                               >  1:124267/1‑222 (MQ=255)
                                                                                                             ccGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGc                                                                                                                                   >  1:512880/1‑250 (MQ=255)
                                                                                                               gTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGcc                                                                                                                                                                                        <  1:530056/195‑1 (MQ=255)
                                                                                                                  ttGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTAATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTtct                                                                                                                              >  1:438831/1‑250 (MQ=255)
                                                                                                                     cTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTtctctc                                                                                                                           <  1:876886/250‑1 (MQ=255)
                                                                                                                     cTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTtctct                                                                                                                            >  1:438606/1‑249 (MQ=255)
                                                                                                                     cTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTC‑TTTTCTTTCACCGCCTTCTCTCtt                                                                                                                         >  1:32869/1‑251 (MQ=255)
                                                                                                                               gATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACtttt                                                                                                                >  1:148608/1‑251 (MQ=255)
                                                                                                                                    tcatcGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTttcttc                                                                                                           <  1:184447/251‑1 (MQ=255)
                                                                                                                                       tcGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTtctctc                                                                                                                           >  1:722558/1‑232 (MQ=255)
                                                                                                                                       tcGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTa                                                                                                         >  1:615132/1‑250 (MQ=255)
                                                                                                                                              gTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTtctctc                                                                                                                           <  1:335992/225‑1 (MQ=255)
                                                                                                                                              gTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTctctct                                                                                                                          >  1:866590/1‑226 (MQ=255)
                                                                                                                                                 ccGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGc                                                                                              <  1:694141/251‑1 (MQ=255)
                                                                                                                                                   gcgTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGCt                                                                                             >  1:51033/1‑250 (MQ=255)
                                                                                                                                                              cgcttcTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGCTCGGCTTCTTGTc                                                                                 <  1:224506/251‑1 (MQ=255)
                                                                                                                                                                cttcttCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGgcc                                                                                                                                                                               >  1:637131/1‑155 (MQ=255)
                                                                                                                                                                cttcttCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGCt                                                                                             >  1:667655/1‑237 (MQ=255)
                                                                                                                                                                 ttcttcTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGCTCGGCTTCTTGTCTgg                                                                              <  1:795703/251‑1 (MQ=255)
                                                                                                                                                                     tctGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCttctttt                                                                                                                                              <  1:576285/183‑1 (MQ=255)
                                                                                                                                                                      ctgctgCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGCTCGGCTTCTTGTCTGGCttt                                                                          >  1:327356/1‑250 (MQ=255)
                                                                                                                                                                           gctTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGCTCGGCTTCTTGTCTGGCTTTCAAttt                                                                    >  1:320643/1‑251 (MQ=255)
                                                                                                                                                                                                 cTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCCCCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGCTCGGCTTCTTGTCTGGCTTTCAATTTTGCCGCTTCTTCGGCTTTTtgg                                              >  1:337334/1‑250 (MQ=255)
                                                                                                                                                                                                     ttGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGCTCGGCTTCTTGTCTGGCTTTCAATTTTGCCGCTTCTTCGGCTTTTTGTGCgg                                          <  1:667885/251‑1 (MQ=255)
                                                                                                                                                                                                          gggCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGCTCGGCTTCTTGTCTGGCTTTCAATTTTGCCGCTTCTTCGGCTTTTTGTGCGGCtt                                       >  1:504930/1‑249 (MQ=255)
                                                                                                                                                                                                           ggCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTtctctc                                                                                                                           >  1:445734/1‑164 (MQ=255)
                                                                                                                                                                                                           ggCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGCTCGGCTTCTTGTCTGGCTTTCAATTTTGCCGCTTCTTCGGCTTTTTGTGCGGCtt                                       >  1:824122/1‑248 (MQ=255)
                                                                                                                                                                                                               aaCTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGCTCGGCTTCTTGTCTGGCTTTCAATTTTGCCGCTTCTTCGGCTTTTTGTGCGGCTTCTGTCgg                                >  1:771181/1‑251 (MQ=255)
                                                                                                                                                                                                                  tCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGCTCGGCTTCTTGTCTGGCTTTCAATTTTGCCGCTTCTTCGGCTTTTTGTGCGGCTTCTGTCGGAAt                             <  1:391055/251‑1 (MQ=255)
                                                                                                                                                                                                                  tCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGCTCGGCTTCTTGTCTGGCTTTCAATTTTGCCGCTTCTTCGGCTTTTTGTGCGGCTTCTGTCGGAAt                             <  1:56221/251‑1 (MQ=255)
                                                                                                                                                                                                                  tCATCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGCTCGGCTTCTTGTCTGGCTTTCAATTTTGCCGCTTCTTCGGCTTTTTGTGCGGCTTCTGTCGGAAt                             <  1:513133/251‑1 (MQ=255)
                                                                                                                                                                                                                    aTCCGCTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGCTCGGCTTCTTGTCTGGCTTTCAATTTTGCCGCTTCTTCGGCTTTTTGTGCGGCTTCTGTCGGAATAg                           <  1:29967/251‑1 (MQ=255)
                                                                                                                                                                                                                         cTTTACGACGTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGCTCGGCTTCTTGTCTGGCTTTCAATTTTGCCGCTTCTTCGGCTTTTTGTGCGGCTTCTGTCGGAATAGTgcg                       >  1:73808/1‑250 (MQ=255)
                                                                                                                                                                                                                                acgTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGCTCGGCTTCTTGTCTGGCTTTCAATTTTGCCGCTTCTTCGGCTTTTTGTGCGGCTTCTGTc                                  <  1:656987/232‑1 (MQ=255)
                                                                                                                                                                                                                                acgTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGCTCGGCTTCTTGTCTGGCTTTCAATTTTGCCGCTTCTTCGGCTTTTTGTGCGGCTTCTGTCGGAAt                             <  1:865517/237‑1 (MQ=255)
                                                                                                                                                                                                                                 cgTAATTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGCTCGGCTTCTTGTCTGGCTTTCAATTTTGCCGCTTCTTCGGCTTTTTGTGCGGCTTCTGTCGGAATAGTGCGCTTTTTACg              <  1:895031/251‑1 (MQ=255)
                                                                                                                                                                                                                                     aTTCCGCTTCTTCCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGttt                                                                                                                                                                    >  1:401255/1‑97 (MQ=255)
                                                                                                                                                                                                                                             tcttcCGTTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGCTCGGCTTCTTGTCTGGCTTTCAATTTTGCCGCTTCTTCGGCTTTTTGTGCGGCTTCTGTCGGAATAGTGCGCTTTTTACGCACTTCCACCTg  <  1:66963/251‑1 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                   
GCTTTGGTCACTTTATTTTTGCCGCGACCACGACCTTCATTGCGGCGCTCTTCTTCATCTTCCGCTTCCAGGGCATAACTGGAGGTTAAATTGTAATCGGAGTAATCTTCCGTATTGCTGTTGTGCTGATTATCATCGGAAAGTTCCGCGTAACGCTTCGCTTCTTCTGCTGCTTTACGCGCTTGTTCTTCCGCTTTTTGGCGGGCTAACTCATCCGCTTTACGACGTAATTCCGCTTCTTCCGCTTTGCGTTTCTCTTTTTCCGGATCCACAGATTTAACTTGATTATTGACCGCACTTTGTGCCTTAGTGGCCTGTGCCTGTTTTGCTTTTTCAGCGGCTTCTTTTTCTTTCACCGCCTTCTCTCTTTGCACTTTTTCTTCTACCGCTTTTTGCTCGGCTTCTTGTCTGGCTTTCAATTTTGCCGCTTCTTCGGCTTTTTGTGCGGCTTCTGTCGGAATAGTGCGCTTTTTACGCACTTCCACCTG  >  1/1418201‑1418688

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑