| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,391,442 | C→T | intergenic (+231862/+29495) | unknown → / ← unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,391,442 | 0 | C | T | 96.3% | 137.7 / NA | 56 | intergenic (+231862/+29495) | unknown/unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Reads supporting (aligned to +/- strand): ref base C (0/2); new base T (35/17); total (35/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGAGAGCAGCGTAATGAATGGAAAATTATTAGAAATCATGGCATGCCCAAGCTGTCACGGACGTTTGGAATACGATGAACAACATCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACCGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTATCGCCACCGATAACGAATTGGTGGCAACCGCCGCAAGAAATTTCGGGGCGGAAGTGTGCATGACTGCCAAAAACCACAATTCCGGCACGGAACGCCTGGCGGAAGTGGTGGAAAAACTGGTGCTGCCCGACGATGAAATTATCGT > 1/1391196‑1391676 | cGAGAGCAGCGTAATGAATGGAAAATTATTAGAAATCATGGCATGCCCAAGCTGTCACGGACGTTTGGAATACGATGAACAACATCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGc < 1:487792/251‑1 (MQ=255) tAATGAATGGAAAATTATTAGAAATCATGGCATGCCCAAGCTGTCACGGACGTTTGGAATACGATGAACAACATCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGc < 1:188706/251‑1 (MQ=255) aatgaatgGAAAATTATTAGAAATCATGGCATGCCCAAGCTGTCACGGACGTTTGGAATACGATGAACAACATCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGcc < 1:869895/251‑1 (MQ=255) aatgaatgGAAAATTATTAGAAATCATGGCATGCCCAAGCTGTCACGGACGTTTGGAATACGATGAACAACATCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGcc < 1:683967/251‑1 (MQ=255) aatgaatgGAAAATTATTAGAAATCATGGCATGCCCAAGCTGTCACGGACGTTTGGAATACGATGAACAACATCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGcc < 1:477702/251‑1 (MQ=255) aatgGAAAATTATTAGAAATCATGGCATGCCCAAGCTGTCACGGACGTTTGGAATACGATGAACAACATCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGata > 1:693195/1‑251 (MQ=255) atgGAAAATTATTAGAAATCATGGCATGCCCAAGCTGTCACGGACGTTTGGAATACGATGAACAACATCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGatat < 1:126938/251‑1 (MQ=255) aTGCCCAAGCTGTCACGGACGTTTGGAATACGATGAACAACATCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAacac < 1:581575/251‑1 (MQ=255) tGCCCAAGCTGTCACGGACGTTTGGAATACGATGAACAACATCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACg > 1:522480/1‑251 (MQ=255) cccAAGCTGTCACGGACGTTTGGAATACGATGAACAACATCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGtt > 1:391171/1‑251 (MQ=255) gTCACGGACGTTTGGAATACGATGAACAACATCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACa > 1:714175/1‑251 (MQ=255) ggACGTTTGGAATACGATGAACAACATCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCa > 1:701453/1‑251 (MQ=255) gACGTTTGGAATACGATGAACAACATCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑ccc > 1:651399/1‑198 (MQ=255) tttGGAATACGATGAACAACATCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACg > 1:662397/1‑231 (MQ=255) tttGGAATACGATGAACAACATCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACa < 1:714062/250‑1 (MQ=255) ttGGAATACGATGAACAACATCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAAt > 1:47215/1‑251 (MQ=255) ggAATACGATGAACAACATCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATc > 1:511271/1‑250 (MQ=255) aTACGATGAACAACATCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGt < 1:262111/251‑1 (MQ=255) aCGATGAACAACATCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCTGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GCGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTg > 1:590503/1‑250 (MQ=255) caacaTCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACcgcg > 1:404586/1‑251 (MQ=255) acaTCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGcc < 1:460262/182‑1 (MQ=255) acaTCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGt > 1:451525/1‑250 (MQ=255) aaCGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTAt < 1:638867/251‑1 (MQ=255) cGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTATCg > 1:761323/1‑251 (MQ=255) cGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTATCg > 1:60621/1‑251 (MQ=255) gCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGcc < 1:820831/148‑1 (MQ=255) aTTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACa > 1:747688/1‑189 (MQ=255) aTTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTAt < 1:585816/213‑1 (MQ=255) gCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTATCGCCACCGATAACGAATTGGTGGCAACCGCCGCAAGaa > 1:174577/1‑241 (MQ=255) cccGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTATCGCCACCGATAACGAATtg < 1:504468/217‑1 (MQ=255) agattttaaaaagagacggggCGCAGCCTTTAAACAAAGAACGGAATAATAAATATAACACAATTCCCC‑GTGATCATC‑CCCGCCCTTTCCCCCCCCAGCCGTTTACGGGGCAAC‑CCCTTAGCCGATATTGCCGGCAAGCCGATAATTCAACACTTTTTTAAACAAGCAAAACAATCCGGTGCCGACCGCGTCATTACCCCCCCCGATAACGAATTGGTGGCAACCGCCGCAAGAAATTTCGGGGCGGAAg < 1:317945/231‑1 (MQ=255) gAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTc < 1:256867/134‑1 (MQ=255) gAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCAACCGCGTCATTATCGCCACCGATAACGAATTGGTGGCAACCGCCGCAAGaa > 1:444454/1‑221 (MQ=255) gAACAGGCGCAGCCGTAAAATAAAAAACAGAAAAATAAATATGACA‑AATTCCCCGGTAATCATT‑CCCGCCCGTGACGCCGCCAGCCG‑TTAACGGGAAAACCCCTAACCCGATATGGCGGGGAAGCGGATGATTCAACACTTTTATAAACAAGCAAAACAACCGGGTGCCGCCAGCGTCATTATCGCCACATAAAACGAATTGGTGGCAACCGCCGCAAGAAATTTCGGGGCGGAAGTGTGCATGAc < 1:806394/246‑1 (MQ=255) ggCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTATCGCCACCGATAACGAATtggtg > 1:129590/1‑200 (MQ=255) gcgcAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTATCGCCACCGATAACGAATTGGTGGCAACCGCCGCAAGAAATTTCGGGGCGGAAGTGTGCATGACTGCCAAAAAc > 1:314531/1‑250 (MQ=255) ccGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTATCGCCACCGATAACGAATTGGTGGCAACCGCCGCAAGAAATTTCGGGGCGGAAGTGTGCATGACTGCCAAAAACCACAAtt > 1:78674/1‑251 (MQ=255) gTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGc < 1:643974/154‑1 (MQ=255) aTCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTATCGCCACCGATAACGAATTGGTGGCAACCGCCGCAAGAAATTTCGGGGCGGAAGTGTGCATGACTGCCAAAAACCACAATTCCGGCa > 1:566682/1‑250 (MQ=255) aTCAAGAACAGAATAATAAATATGCCACAATCCCCC‑GTG‑TCCTTCCCCCCCCTTTCCCCCCCCAGCCG‑TTTCCGGGCAAACCCCTTAGCCGATATGGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCAAAACAACCCGGTGCCGCCCGCGTCATTACCGCCCCCGAAAACGAATGGGTGGCAACCGCCGCAAGAAATTTCGGGGCGGAAGTGTGCATGACTGCCAAAAACCACAATTCCGGCAc < 1:293855/251‑1 (MQ=255) ggATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGc < 1:254251/92‑1 (MQ=255) ggATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTATCGCCACCGATAACGAATTGGTGGCAACCGCCGCAAGAAATTTCGGGGCGGAAGTGTGc > 1:630611/1‑212 (MQ=255) aattaatATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTATCGCCACCGATAACGAATTGGTGGCAACCGCCGCAAGAAATTTCGGGGCGGAAGTGTGCATGACTGCCAAAAACCACAATTCCGGCACGGAACGCCTGGCgg > 1:197226/1‑251 (MQ=255) aattaatATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTATCGCCACCGATAACGAATTGGCGGCAACCGCCGCAAGAAATTTCGGGGCGGAAgtgagc > 1:882109/1‑205 (MQ=255) atatGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTATCGCCACCGATAACGAATTGGTGGCAACCGCCGCAAGAAATTTCGGGGCGGAAGTGTGCATGACTGCCAAAAACCACAATTCCGGCACGGAACGCCTGGCGGAAgtg > 1:183609/1‑251 (MQ=255) acacAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTa > 1:121593/1‑139 (MQ=255) acacAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTATCGCCACCGATAACGAATTGGTGGCAACCGCCGCAAGAAATTTCGGGGCGGAAGTGTGCATGACTGCCAAAAAc > 1:851137/1‑213 (MQ=255) acacAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTATCGCCACCGATAACGAATTGGTGGCAACCGCCGCAAGAAATTTCGGGGCGGAAGTGTGCATGACTGCCAAAAACCACAATTCCGGCACGGAACGCCTGGCGGAAGTGGTGGa > 1:270342/1‑251 (MQ=255) caATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTAt > 1:102378/1‑137 (MQ=255) caATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTATCGCCACCGATAACGAATTGGTGGCAACCGCCGCAAGAAATTTCGGGGCGGAAGTGTGCATGACTGCCAAAAACCACAATTCCGGCACGGAACGCCTGGCGGAAGTGGTGGaaaa > 1:241221/1‑251 (MQ=255) aTTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTATCGCCACCGATAACGAATtggtgg > 1:818281/1‑158 (MQ=255) gTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTATCGCCACCGATAACGAATTGGTGGCAACCGCCGCAAGAAATTTCGGGGCGGAAGTGTGCATGACTGCCAAAAACCACAATTCCGGCACGGAACGCCTGGCGGAAGTGGTGGAAAAACTGGtg > 1:541812/1‑249 (MQ=255) cccccccgTTCCGCCTCCCGCCCTTTACGGGGCCAC‑CCCTTACCCGATATTGCCGCCAAGCCGTTGATTCAACACTTTTTAAAACAAGCCAAACAACCCGGTGCCGCCCGCGTCATTATCCCCCCCGATAACGATTTGGTGGCAACCGCCGCAAGAAATTTCGGGGCGGAAGTGTGCATGACTGCCAAAAACCACAATTCCGGCACGGAACGCCTGGCGGAAGTGGTGGAAAAACTGGTGCTGCCcgacga < 1:245738/247‑1 (MQ=255) gCCTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTATCGCCACCGATAACGAATTGGTGGCAACCGCCGCAAGAAATTTCGGGGCGGAAGTGTGCATGACTGCCAAAAACCACAATTCCGGCACGGAACGCCTGGCGGAAGTGGTGGAAAAACTGGTGCTGCCCGACGATGAAATTATCGt > 1:82033/1‑251 (MQ=255) ccTCCAGCCGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTATCGCCACCGATAACGAATTGGTGGCAACCGCCGCAAGAAATTTCGGGGCGGAAGTGTGCATGACTGCCAAAAACCACAATTCCGGCACGGAACGCCTGGCGGAAGTGGTGGAAAAACTGGTGCTGCCCGACGATGAAATTATCGt > 1:276103/1‑250 (MQ=255) cGCTTACTGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAAc > 1:388688/1‑73 (MQ=255) | CGAGAGCAGCGTAATGAATGGAAAATTATTAGAAATCATGGCATGCCCAAGCTGTCACGGACGTTTGGAATACGATGAACAACATCAACGTTTAATCTGTCGTTTTGAAAAAATCGCTTACCCGATTAAGAACGGCATTCCCGTATTACCGGCGGAACAGGCGCAGCCGTTAAATCAAGAACAGGATAATTAATATGACACAATTCACC‑GTGATCATT‑CCCGCCCGTTACGCCTCCAGCCGCTTACCGGGCAAA‑CCCTTAGCCGATATTGCCGGCAAGCCGATGATTCAACACGTTTTTGAACAAGCCAAACAATCCGGTGCCGACCGCGTCATTATCGCCACCGATAACGAATTGGTGGCAACCGCCGCAAGAAATTTCGGGGCGGAAGTGTGCATGACTGCCAAAAACCACAATTCCGGCACGGAACGCCTGGCGGAAGTGGTGGAAAAACTGGTGCTGCCCGACGATGAAATTATCGT > 1/1391196‑1391676 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |