Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,388,424 A→G intergenic (+228844/+32513) unknown → / ← unknown tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,388,4240AG100.0% 187.9 / NA 68intergenic (+228844/+32513)unknown/unknowntRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (32/36);  total (32/36)

ACCGGACATTGCGCTGATTTCCAGCGGACGCTGGAACCCATGGCATTTTCCCCATAAAGACGTGGTGGCGCGCCTGCAACAACAAGGATCACAAATTTATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTAACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATCGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTAACCGATTCCGGCTTAATTTTCTTACTGAAACCCTTATTGGATGATGGTTTTGGCAAAGCTGACGCTTCTTTTTTAAAACAAATGTCGG  >  1/1388180‑1388647
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                               
aCCGGACATTGCGCTGATTTCCAGCGGACGCTGGAACCCATGGCATTTTCCCCATAAAGACGTGGTGGCGCGCCTGCAACAACAAGGATCACAAATTTATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTaa                                                                                                                                                                                                                           >  1:5032/1‑251 (MQ=255)
                        cGGACGCTGGAACCCATGGCATTTTCCCCATAAAGACGTGGTGGCGCGCCTGCAACAACAAGGATCACAAATTTATAATACGGCGCATAGCGGGCAATTCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGAt                                                                                                                                                                                                   <  1:430642/251‑1 (MQ=255)
                            cGCTGGAACCCATGGCATTTTCCCCATAAAGACGTGGTGGCGCGCCTGCAACAACAAGGATCACAAATTTATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAg                                                                                                                                                                                               >  1:227674/1‑251 (MQ=255)
                              cTGGAACCCATGGCATTTTCCCCATAAAGACGTGGTGGCGCGCCTGCAACAACAAGGATCACAAATTTATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGAc                                                                                                                                                                                             <  1:70544/251‑1 (MQ=255)
                                      cATGGCATTTTCCCCATAAAGACGTGGTGGCGCGCCTGCAACAACAAGGATCACAAATTTATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTccac                                                                                                                                                                                     <  1:865834/251‑1 (MQ=255)
                                      cATGGCATTTTCCCCATAAAGACGTGGTGGCGCGCCTGCAACAACAAGGATCACAAATTTATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTccac                                                                                                                                                                                     <  1:500846/251‑1 (MQ=255)
                                                   ccATAAAGACGTGGTGGCGCGCCTGCAACAACAAGGATCACAAATTTATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCtt                                                                                                                                                                         >  1:514810/1‑250 (MQ=255)
                                                        aaGACGTGGTGGCGCGCCTGCAACAACAAGGATCACAAATTTATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACg                                                                                                                                                                   <  1:325929/251‑1 (MQ=255)
                                                        aaGACGTGGTGGCGCGCCTGCAACAACAAGGATCACAAATTTATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACg                                                                                                                                                                   <  1:24009/251‑1 (MQ=255)
                                                           aCGTGGTGGCGCGCCTGCAACAACAAGGATCACAAATTTATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGt                                                                                                                                                                  <  1:140799/249‑1 (MQ=255)
                                                                        ccTGCAACAACAAGGATCACAAATTTATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCgatgat                                                                                                                                                    <  1:492275/250‑1 (MQ=255)
                                                                            caacaacaaGGATCACAAATTTATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGcc                                                                                                                                               <  1:654699/251‑1 (MQ=255)
                                                                                aacaaGGATCACAAATTTATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGAc                                                                                                                                                                                             <  1:119026/201‑1 (MQ=255)
                                                                                     ggATCACAAATTTATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGAcc                                                                                                                                                                                            <  1:440738/197‑1 (MQ=255)
                                                                                      gATCACAAATTTATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGAcc                                                                                                                                                                                            >  1:790717/1‑196 (MQ=255)
                                                                                        tCACAAATTTATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAg                                                                                                                                   >  1:11810/1‑251 (MQ=255)
                                                                                           caAATTTATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGAcc                                                                                                                                                                                            >  1:323236/1‑191 (MQ=255)
                                                                                           caAATTTATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGtt                                                                                                                                <  1:3144/251‑1 (MQ=255)
                                                                                              aTTTATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTccac                                                                                                                                                                                     >  1:275560/1‑195 (MQ=255)
                                                                                              aTTTATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAAc                                                                                                                                                                    <  1:569407/212‑1 (MQ=255)
                                                                                               tttATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAAt                                                                                                                                                                                                                 <  1:847985/166‑1 (MQ=255)
                                                                                               tttATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTGTGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGcc                                                                                                                                               >  1:447379/1‑232 (MQ=255)
                                                                                                ttATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCt                                                                                                                                                                          <  1:886985/204‑1 (MQ=255)
                                                                                                ttATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGc                                                                                                                                                           >  1:547070/1‑219 (MQ=255)
                                                                                                ttATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGc                                                                                                                                     >  1:752136/1‑241 (MQ=255)
                                                                                                ttATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGc                                                                                                                                     <  1:164866/241‑1 (MQ=255)
                                                                                                ttATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGAtt                                                                                                                           <  1:326542/251‑2 (MQ=255)
                                                                                                ttATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGAtt                                                                                                                           >  1:199042/1‑250 (MQ=255)
                                                                                                          gcgcATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGAt                                                                                                                                                                                                   >  1:872242/1‑169 (MQ=255)
                                                                                                                      cAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTa                                                                                                      <  1:35965/250‑1 (MQ=255)
                                                                                                                        aaTCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAg                                                                                                                                                                                                                      >  1:148140/1‑136 (MQ=255)
                                                                                                                        aaTCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGAcc                                                                                                                                                                                            >  1:337431/1‑162 (MQ=255)
                                                                                                                             gTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGAcc                                                                                                                                                                                            <  1:130352/157‑1 (MQ=255)
                                                                                                                             gTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGc                                                                                                                                                           >  1:262458/1‑190 (MQ=255)
                                                                                                                               cTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAACGCGt                                                                                            >  1:157186/1‑251 (MQ=255)
                                                                                                                                  ttGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTaa                                                                                         >  1:649337/1‑251 (MQ=255)
                                                                                                                                    gTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGAc                                                                                                                                                                                                                        >  1:420856/1‑122 (MQ=255)
                                                                                                                                    gTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGcc                                                                                                                                               >  1:753262/1‑195 (MQ=255)
                                                                                                                                    gTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTAAc                                                                                        >  1:339100/1‑250 (MQ=255)
                                                                                                                                         aCAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGt                                                                                                           <  1:688925/226‑1 (MQ=255)
                                                                                                                                         aCAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTAt                                                                                                     <  1:242593/232‑1 (MQ=255)
                                                                                                                                         aCAATGAAGAGATCAAAATTCAGACCACGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTAACCGAtt                                                                                   >  1:555009/1‑250 (MQ=255)
                                                                                                                                             tGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTAACCGATTCCGGc                                                                              <  1:519313/251‑1 (MQ=255)
                                                                                                                                              gAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTAACCGATTCCgg                                                                               >  1:424338/1‑249 (MQ=255)
                                                                                                                                                    aTCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGCCCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAAcgcg                                                                                             <  1:16209/229‑1 (MQ=255)
                                                                                                                                                        aaaTTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTAACCg                                                                                      <  1:377782/232‑1 (MQ=255)
                                                                                                                                                         aaTTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAAcg                                                                                               <  1:275325/222‑1 (MQ=255)
                                                                                                                                                         aaTTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTAACCGATTCCGGCTTAATTTTCTTa                                                                  >  1:96817/1‑251 (MQ=255)
                                                                                                                                                                        cgcTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTAACCGATTCCGGCTTAATTTTCTTACTGAAACCCTTATTg                                                   <  1:432359/251‑1 (MQ=255)
                                                                                                                                                                        cgcTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTAACCGATTCCGGCTTAATTTTCTTACTGAAACCCTTATTg                                                   <  1:189035/251‑1 (MQ=255)
                                                                                                                                                                                        tGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTAACCGATTCCGGCTTAATTTTCTTACTGAAACCCTTATTGGATGATGGTTTTGGCa                                   >  1:545895/1‑251 (MQ=255)
                                                                                                                                                                                        tGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTAACCGATTCCGGCTTAATTTTCTTACTGAAACCCTTATTGGATGATGGTTTTGGCa                                   <  1:405028/251‑1 (MQ=255)
                                                                                                                                                                                          gTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGc                                                                                                                                     <  1:512138/151‑1 (MQ=255)
                                                                                                                                                                                            aTCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTAACCGATTc                                                                                  >  1:536523/1‑200 (MQ=255)
                                                                                                                                                                                                    ttgattgGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGgtgt                                                                                                                >  1:439856/1‑162 (MQ=255)
                                                                                                                                                                                                                      aaaTAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGcc                                                                                                                                               >  1:718176/1‑113 (MQ=255)
                                                                                                                                                                                                                      aaaTAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTAACCGATTCCGGCTTAATTTTCtt                                                                   <  1:124659/189‑1 (MQ=255)
                                                                                                                                                                                                                      aaaTAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTAACCGATTCCGGCTTAATTTTCTTACTGAAACCCTTATTGGATGATGGTTTTGGCAAAGc                               <  1:8571/225‑1 (MQ=255)
                                                                                                                                                                                                                      aaaTAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTAACCGATTCCGGCTTAATTTTCTTACTGAAACCCTTATTGGATGATGGTTTTGGCAAAGCTGACGCTTCTTTTTTAAAACAAATg      <  1:844379/250‑1 (MQ=255)
                                                                                                                                                                                                                      aaaTAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTAACCGATTCCGGCTTAATTTTCTTACTGAAACCCTTATTGGATGATGGTTTTGGCAAAGCTGACGCTTCTTTTTTAAAACAAATGt     >  1:497769/1‑251 (MQ=255)
                                                                                                                                                                                                                       aaTAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTAACCGATTCCGGCTTAATTTTCTTACTGAAACCCTTATTGGATGATGGTTTTGGCAAAGCTGACGCTTCTTTTTTAAAACAAATGTc    <  1:146937/251‑1 (MQ=255)
                                                                                                                                                                                                                        aTAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTa                                                                                                      >  1:749814/1‑152 (MQ=255)
                                                                                                                                                                                                                         tAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACg                                                                                                                                                                   <  1:524748/90‑1 (MQ=255)
                                                                                                                                                                                                                         tAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTAACCGATTCCGGCTTAATTTTCTTACTGAAACCCTTATTGGATGATGGTTTTGGCa                                   <  1:873658/218‑1 (MQ=255)
                                                                                                                                                                                                                         tAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTAACCGATTCCGGCTTAATTTTCTTACTGAAACCCTTATTGGATGATGGTTTTGGCAAAGCTGACGCTTCTTTTTTAAAAc           <  1:771174/242‑1 (MQ=255)
                                                                                                                                                                                                                         tAAAGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTAACCGATTCCGGCTTAATTTTCTTACTGAAACCCTTATTGGATGATGGTTTTGGCAAAGCTGACGCTTCTTTTTTAAAACAAATGTCgg  >  1:289811/1‑251 (MQ=255)
                                                                                                                                                                                                                           aaGGTACAATGCGCCATTATTTTTTGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGAttg                                                                                                                          >  1:857440/1‑127 (MQ=255)
                                                                                                                                                                                                                                              ttttttGACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATTGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTAACCGATTCCGGCTTAATTTTCTTACTGAAACCCTTATTGGATGATGGTTTTGGCAAAGCTGACGCTTCTTTTTTAAAACAAATg      >  1:766175/1‑226 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                               
ACCGGACATTGCGCTGATTTCCAGCGGACGCTGGAACCCATGGCATTTTCCCCATAAAGACGTGGTGGCGCGCCTGCAACAACAAGGATCACAAATTTATAATACGGCGCATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGATTGATTGGCTTGAGCACGAAATAAAGGTACAATGCGCCATTATTTTTTAACCTAAGACAGAAAATTTATTATGCAAGATCAAGACCTTTCCACCATGCAAACCTTCAAACGTTTATGGCCGATGATTAGCCCGTATAAAGCAGGTTTGATCGTTTCCGGTGTTGCGTTAGTATTAAACGCGTTAACCGATTCCGGCTTAATTTTCTTACTGAAACCCTTATTGGATGATGGTTTTGGCAAAGCTGACGCTTCTTTTTTAAAACAAATGTCGG  >  1/1388180‑1388647

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑